Merge branch 'fix/datset-listing-ux' into develop

- Refactored zoom control component for better accessibility and styling.
- Added hover effects and improved button states for zoom in/out buttons.
- Updated map page layout with enhanced dataset card design and responsive styles.
- Introduced empty state for no datasets found and improved results header.
- Added icons for dataset cards and improved author display.

Dockerfile

@@ -1,57 +1,63 @@
 ################## First Stage - Creating base #########################
 
 # Created a variable to hold our node base image
-ARG NODE_IMAGE=node:22-bookworm-slim
+ARG NODE_IMAGE=node:22-trixie-slim
 
 FROM $NODE_IMAGE AS base
+
 # Install dumb-init and ClamAV, and perform ClamAV database update
-RUN apt update \
+RUN apt-get update \
-    && apt-get install -y dumb-init clamav clamav-daemon nano \ 
+    && apt-get install -y --no-install-recommends \
+    dumb-init \
+    clamav \
+    clamav-daemon \
+    clamdscan \
+    ca-certificates \   
     && rm -rf /var/lib/apt/lists/* \
     # Creating folders and changing ownerships
-    && mkdir -p /home/node/app && chown node:node /home/node/app \
+    && mkdir -p /home/node/app \
-    &&  mkdir -p /var/lib/clamav \
+    && mkdir -p /var/lib/clamav \
     && mkdir /usr/local/share/clamav \
-    && chown -R node:clamav /var/lib/clamav /usr/local/share/clamav /etc/clamav \
-    # permissions
     && mkdir /var/run/clamav \
-    && chown node:clamav /var/run/clamav \
+    && mkdir -p /var/log/clamav \
-    && chmod 750 /var/run/clamav
+    && mkdir -p /tmp/clamav-logs \
-# -----------------------------------------------
-# --- ClamAV & FeshClam -------------------------
-# -----------------------------------------------
-# RUN \
-#   chmod 644 /etc/clamav/freshclam.conf && \
-#   freshclam && \
-#   mkdir /var/run/clamav && \
-  # chown -R clamav:root /var/run/clamav
    
-# # initial update of av databases
+    # Set ownership and permissions
-# RUN freshclam
+    && chown node:node /home/node/app \
+    # && chown -R node:clamav /var/lib/clamav /usr/local/share/clamav /etc/clamav /var/run/clamav \
+    && chown -R node:clamav /var/lib/clamav /usr/local/share/clamav /etc/clamav /var/run/clamav /var/log/clamav \
+    && chown -R node:clamav /etc/clamav \
+    && chmod 755 /tmp/clamav-logs \
+    && chmod 750 /var/run/clamav \
+    && chmod 755 /var/lib/clamav \
+    && chmod 755 /var/log/clamav \
+     # Add node user to clamav group and allow sudo for clamav commands
+    && usermod -a -G clamav node
+    # && chmod 666 /var/run/clamav/clamd.socket
+    # Make directories group-writable so node (as member of clamav group) can access them
+    # && chmod 750 /var/run/clamav /var/lib/clamav /var/log/clamav /tmp/clamav-logs
 
-# Configure Clam AV...
+
+# Configure ClamAV - copy config files before switching user
+# COPY --chown=node:clamav ./*.conf /etc/clamav/
 COPY --chown=node:clamav ./*.conf /etc/clamav/
 
-# # permissions
+
-# RUN mkdir /var/run/clamav && \
+
-#     chown node:clamav /var/run/clamav && \
-#     chmod 750 /var/run/clamav
 # Setting the working directory
 WORKDIR /home/node/app
 # Changing the current active user to "node"
+
+# Download initial ClamAV database as root before switching users
 USER node
+RUN freshclam --quiet || echo "Initial database download failed - will retry at runtime"
 
-# initial update of av databases
+# Copy entrypoint script
-RUN freshclam
-
-# VOLUME /var/lib/clamav
 COPY --chown=node:clamav docker-entrypoint.sh /home/node/app/docker-entrypoint.sh
 RUN chmod +x /home/node/app/docker-entrypoint.sh
 ENV TZ="Europe/Vienna"
 
 
-
-
 ################## Second Stage - Installing dependencies ##########
 # In this stage, we will start installing dependencies
 FROM base AS dependencies
@@ -70,7 +76,6 @@ ENV NODE_ENV=production
 # We run "node ace build" to build the app (dist folder) for production
 RUN node ace build --ignore-ts-errors
 # RUN node ace build --production
-# RUN node ace build --ignore-ts-errors
 
 
 ################## Final Stage - Production #########################
@@ -88,6 +93,7 @@ RUN npm ci --omit=dev
 # Copy files to the working directory from the build folder the user
 COPY --chown=node:node --from=build /home/node/app/build .
 # Expose port
+# EXPOSE 3310
 EXPOSE 3333
 ENTRYPOINT ["/home/node/app/docker-entrypoint.sh"]
 # Run the command to start the server using "dumb-init"

LICENSE

@@ -0,0 +1,22 @@
+
+MIT License
+
+Copyright (c) 2025 Tethys Research Repository
+
+Permission is hereby granted, free of charge, to any person obtaining a copy
+of this software and associated documentation files (the "Software"), to deal
+in the Software without restriction, including without limitation the rights
+to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
+copies of the Software, and to permit persons to whom the Software is
+furnished to do so, subject to the following conditions:
+
+The above copyright notice and this permission notice shall be included in all
+copies or substantial portions of the Software.
+
+THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
+IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
+FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
+AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
+LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
+OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
+SOFTWARE

adonisrc.ts

@@ -11,9 +11,10 @@ export default defineConfig({
  
 */
     commands: [
-      () => import('@adonisjs/core/commands'),
+        () => import('@adonisjs/core/commands'),
-      () => import('@adonisjs/lucid/commands'),
+        () => import('@adonisjs/lucid/commands'),
-      () => import('@adonisjs/mail/commands')],
+        () => import('@adonisjs/mail/commands')
+    ],
     /*
 |--------------------------------------------------------------------------
 | Preloads
@@ -26,16 +27,17 @@ export default defineConfig({
         () => import('./start/routes.js'),
         () => import('./start/kernel.js'),
         () => import('#start/validator'),
-        () => import('#start/rules/unique'),
+        // () => import('#start/rules/unique'),
-        () => import('#start/rules/translated_language'),
+        // () => import('#start/rules/translated_language'),
-        () => import('#start/rules/unique_person'),
+        // () => import('#start/rules/unique_person'),
-        () => import('#start/rules/file_length'),
+        // // () => import('#start/rules/file_length'),
-        () => import('#start/rules/file_scan'),
+        // // () => import('#start/rules/file_scan'),
-        () => import('#start/rules/allowed_extensions_mimetypes'),
+        // // () => import('#start/rules/allowed_extensions_mimetypes'),
-        () => import('#start/rules/dependent_array_min_length'),
+        // () => import('#start/rules/dependent_array_min_length'),
-        () => import('#start/rules/referenceValidation'),
+        // () => import('#start/rules/referenceValidation'),
-        () => import('#start/rules/valid_mimetype'),
+        // () => import('#start/rules/valid_mimetype'),
-        () => import('#start/rules/array_contains_types'),
+        // () => import('#start/rules/array_contains_types'),
+        // () => import('#start/rules/orcid'),
     ],
     /*
 |--------------------------------------------------------------------------
@@ -70,7 +72,7 @@ export default defineConfig({
         () => import('#providers/stardust_provider'),
         () => import('#providers/query_builder_provider'),
         () => import('#providers/token_worker_provider'),
-        // () => import('#providers/validator_provider'),
+        () => import('#providers/rule_provider'),
         // () => import('#providers/drive/provider/drive_provider'),
         () => import('@adonisjs/drive/drive_provider'),
         // () => import('@adonisjs/core/providers/vinejs_provider'),

app/Controllers/Http/Api/AuthorsController.ts

@@ -5,19 +5,28 @@ import Person from '#models/person';
 // node ace make:controller Author
 export default class AuthorsController {
     public async index({}: HttpContext) {       
-        // select * from gba.persons
+        
-        // where exists (select * from gba.documents inner join gba.link_documents_persons on "documents"."id" = "link_documents_persons"."document_id"
-        // 			  where ("link_documents_persons"."role" = 'author') and ("persons"."id" = "link_documents_persons"."person_id"));
         const authors = await Person.query()
-            .preload('datasets')
+        .select([
-            .where('name_type', 'Personal')
+            'id', 
-            .whereHas('datasets', (dQuery) => {
+            'academic_title', 
-                dQuery.wherePivot('role', 'author');
+            'first_name', 
-            })
+            'last_name', 
-            .withCount('datasets', (query) => {
+            'identifier_orcid', 
-                query.as('datasets_count');
+            'status', 
-            })
+            'name_type', 
-            .orderBy('datasets_count', 'desc');
+            'created_at'
+            // Note: 'email' is omitted
+        ])
+        .preload('datasets')
+        .where('name_type', 'Personal')
+        .whereHas('datasets', (dQuery) => {
+            dQuery.wherePivot('role', 'author');
+        })
+        .withCount('datasets', (query) => {
+            query.as('datasets_count');
+        })
+        .orderBy('datasets_count', 'desc');
 
         return authors;
     }

app/Controllers/Http/Api/AvatarController.ts

@@ -2,26 +2,46 @@ import type { HttpContext } from '@adonisjs/core/http';
 import { StatusCodes } from 'http-status-codes';
 import redis from '@adonisjs/redis/services/main';
 
-const PREFIXES = ['von', 'van'];
+const PREFIXES = ['von', 'van', 'de', 'del', 'della', 'di', 'da', 'dos', 'du', 'le', 'la'];
 const DEFAULT_SIZE = 50;
+const MIN_SIZE = 16;
+const MAX_SIZE = 512;
 const FONT_SIZE_RATIO = 0.4;
 const COLOR_LIGHTENING_PERCENT = 60;
 const COLOR_DARKENING_FACTOR = 0.6;
+const CACHE_TTL = 24 * 60 * 60; // 24 hours instead of 1 hour
 
 export default class AvatarController {
     public async generateAvatar({ request, response }: HttpContext) {
         try {
             const { name, size = DEFAULT_SIZE } = request.only(['name', 'size']);
-            if (!name) {
+
-                return response.status(StatusCodes.BAD_REQUEST).json({ error: 'Name is required' });
+            // Enhanced validation
+            if (!name || typeof name !== 'string' || name.trim().length === 0) {
+                return response.status(StatusCodes.BAD_REQUEST).json({
+                    error: 'Name is required and must be a non-empty string',
+                });
+            }
+
+            const parsedSize = this.validateSize(size);
+            if (!parsedSize.isValid) {
+                return response.status(StatusCodes.BAD_REQUEST).json({
+                    error: parsedSize.error,
+                });
             }
 
             // Build a unique cache key for the given name and size
-            const cacheKey = `avatar:${name.trim().toLowerCase()}-${size}`;
+            const cacheKey = `avatar:${this.sanitizeName(name)}-${parsedSize.value}`;
-            const cachedSvg = await redis.get(cacheKey);
+            // const cacheKey = `avatar:${name.trim().toLowerCase()}-${size}`;
-            if (cachedSvg) {
+            try {
-                this.setResponseHeaders(response);
+                const cachedSvg = await redis.get(cacheKey);
-                return response.send(cachedSvg);
+                if (cachedSvg) {
+                    this.setResponseHeaders(response);
+                    return response.send(cachedSvg);
+                }
+            } catch (redisError) {
+                // Log redis error but continue without cache
+                console.warn('Redis cache read failed:', redisError);
             }
 
             const initials = this.getInitials(name);
@@ -29,41 +49,85 @@ export default class AvatarController {
             const svgContent = this.createSvg(size, colors, initials);
 
             // // Cache the generated avatar for future use, e.g. 1 hour expiry
-            await redis.setex(cacheKey, 3600, svgContent);
+            try {
+                await redis.setex(cacheKey, CACHE_TTL, svgContent);
+            } catch (redisError) {
+                // Log but don't fail the request
+                console.warn('Redis cache write failed:', redisError);
+            }
 
             this.setResponseHeaders(response);
             return response.send(svgContent);
         } catch (error) {
-            return response.status(StatusCodes.INTERNAL_SERVER_ERROR).json({ error: error.message });
+            console.error('Avatar generation error:', error);
+            return response.status(StatusCodes.INTERNAL_SERVER_ERROR).json({
+                error: 'Failed to generate avatar',
+            });
         }
     }
 
-    private getInitials(name: string): string {
+    private validateSize(size: any): { isValid: boolean; value?: number; error?: string } {
-        const parts = name
+        const numSize = Number(size);
+
+        if (isNaN(numSize)) {
+            return { isValid: false, error: 'Size must be a valid number' };
+        }
+
+        if (numSize < MIN_SIZE || numSize > MAX_SIZE) {
+            return {
+                isValid: false,
+                error: `Size must be between ${MIN_SIZE} and ${MAX_SIZE}`,
+            };
+        }
+
+        return { isValid: true, value: Math.floor(numSize) };
+    }
+
+    private sanitizeName(name: string): string {
+        return name
             .trim()
+            .toLowerCase()
+            .replace(/[^a-z0-9\s-]/gi, '');
+    }
+
+    private getInitials(name: string): string {
+        const sanitized = name.trim().replace(/\s+/g, ' '); // normalize whitespace
+        const parts = sanitized
             .split(' ')
-            .filter((part) => part.length > 0);
+            .filter((part) => part.length > 0)
+            .map((part) => part.trim());
 
         if (parts.length === 0) {
             return 'NA';
         }
 
-        if (parts.length >= 2) {
+        if (parts.length === 1) {
-            return this.getMultiWordInitials(parts);
+            // For single word, take first 2 characters or first char if only 1 char
+            return parts[0].substring(0, Math.min(2, parts[0].length)).toUpperCase();
         }
-        return parts[0].substring(0, 2).toUpperCase();
+
+        return this.getMultiWordInitials(parts);
     }
 
     private getMultiWordInitials(parts: string[]): string {
-        const firstName = parts[0];
+        // Filter out prefixes and short words
-        const lastName = parts[parts.length - 1];
+        const significantParts = parts.filter((part) => !PREFIXES.includes(part.toLowerCase()) && part.length > 1);
-        const firstInitial = firstName.charAt(0).toUpperCase();
-        const lastInitial = lastName.charAt(0).toUpperCase();
 
-        if (PREFIXES.includes(lastName.toLowerCase()) && lastName === lastName.toUpperCase()) {
+        if (significantParts.length === 0) {
-            return firstInitial + lastName.charAt(1).toUpperCase();
+            // Fallback to first and last regardless of prefixes
+            const firstName = parts[0];
+            const lastName = parts[parts.length - 1];
+            return (firstName.charAt(0) + lastName.charAt(0)).toUpperCase();
         }
-        return firstInitial + lastInitial;
+
+        if (significantParts.length === 1) {
+            return significantParts[0].substring(0, 2).toUpperCase();
+        }
+
+        // Take first and last significant parts
+        const firstName = significantParts[0];
+        const lastName = significantParts[significantParts.length - 1];
+        return (firstName.charAt(0) + lastName.charAt(0)).toUpperCase();
     }
 
     private generateColors(name: string): { background: string; text: string } {
@@ -75,31 +139,44 @@ export default class AvatarController {
     }
 
     private createSvg(size: number, colors: { background: string; text: string }, initials: string): string {
-        const fontSize = size * FONT_SIZE_RATIO;
+        const fontSize = Math.max(12, Math.floor(size * FONT_SIZE_RATIO)); // Ensure readable font size
-        return `
+
-            <svg width="${size}" height="${size}" xmlns="http://www.w3.org/2000/svg">
+        // Escape any potential HTML/XML characters in initials
-              <rect width="100%" height="100%" fill="#${colors.background}"/>
+        const escapedInitials = this.escapeXml(initials);
-              <text x="50%" y="50%" dominant-baseline="middle" text-anchor="middle" font-weight="bold" font-family="Arial, sans-serif" font-size="${fontSize}" fill="#${colors.text}">${initials}</text>
+
-            </svg>
+        return `<svg width="${size}" height="${size}" xmlns="http://www.w3.org/2000/svg" viewBox="0 0 ${size} ${size}">
-          `;
+                    <rect width="100%" height="100%" fill="#${colors.background}" rx="${size * 0.1}"/>
+                    <text x="50%" y="50%" dominant-baseline="central" text-anchor="middle" 
+                            font-weight="600" font-family="-apple-system, BlinkMacSystemFont, 'Segoe UI', system-ui, sans-serif" 
+                            font-size="${fontSize}" fill="#${colors.text}">${escapedInitials}</text>
+                </svg>`;
+    }
+
+    private escapeXml(text: string): string {
+        return text.replace(/&/g, '&amp;').replace(/</g, '&lt;').replace(/>/g, '&gt;').replace(/"/g, '&quot;').replace(/'/g, '&apos;');
     }
 
     private setResponseHeaders(response: HttpContext['response']): void {
-        response.header('Content-type', 'image/svg+xml');
+        response.header('Content-Type', 'image/svg+xml');
-        response.header('Cache-Control', 'no-cache');
+        response.header('Cache-Control', 'public, max-age=86400'); // Cache for 1 day
-        response.header('Pragma', 'no-cache');
+        response.header('ETag', `"${Date.now()}"`); // Simple ETag
-        response.header('Expires', '0');
     }
 
     private getColorFromName(name: string): string {
         let hash = 0;
-        for (let i = 0; i < name.length; i++) {
+        const normalizedName = name.toLowerCase().trim();
-            hash = name.charCodeAt(i) + ((hash << 5) - hash);
+
+        for (let i = 0; i < normalizedName.length; i++) {
+            hash = normalizedName.charCodeAt(i) + ((hash << 5) - hash);
+            hash = hash & hash; // Convert to 32-bit integer
         }
 
+        // Ensure we get vibrant colors by constraining the color space
         const colorParts = [];
         for (let i = 0; i < 3; i++) {
-            const value = (hash >> (i * 8)) & 0xff;
+            let value = (hash >> (i * 8)) & 0xff;
+            // Ensure minimum color intensity for better contrast
+            value = Math.max(50, value);
             colorParts.push(value.toString(16).padStart(2, '0'));
         }
         return colorParts.join('');
@@ -110,7 +187,7 @@ export default class AvatarController {
         const g = parseInt(hexColor.substring(2, 4), 16);
         const b = parseInt(hexColor.substring(4, 6), 16);
 
-        const lightenValue = (value: number) => Math.min(255, Math.floor((value * (100 + percent)) / 100));
+        const lightenValue = (value: number) => Math.min(255, Math.floor(value + (255 - value) * (percent / 100)));
 
         const newR = lightenValue(r);
         const newG = lightenValue(g);
@@ -124,7 +201,7 @@ export default class AvatarController {
         const g = parseInt(hexColor.slice(2, 4), 16);
         const b = parseInt(hexColor.slice(4, 6), 16);
 
-        const darkenValue = (value: number) => Math.round(value * COLOR_DARKENING_FACTOR);
+        const darkenValue = (value: number) => Math.max(0, Math.floor(value * COLOR_DARKENING_FACTOR));
 
         const darkerR = darkenValue(r);
         const darkerG = darkenValue(g);

app/Controllers/Http/Api/DatasetController.ts

@@ -1,24 +1,36 @@
 import type { HttpContext } from '@adonisjs/core/http';
-// import Person from 'App/Models/Person';
 import Dataset from '#models/dataset';
 import { StatusCodes } from 'http-status-codes';
+import DatasetReference from '#models/dataset_reference';
 
 // node ace make:controller Author
 export default class DatasetController {
-    public async index({}: HttpContext) {
+    /**
-        // Select datasets with server_state 'published' or 'deleted' and sort by the last published date
+     * GET /api/datasets
-        const datasets = await Dataset.query()
+     * Find all published datasets
-            .where(function (query) {
+     */
-                query.where('server_state', 'published')
+    public async index({ response }: HttpContext) {
-                     .orWhere('server_state', 'deleted');
+        try {
-            })
+            const datasets = await Dataset.query()
-            .preload('titles')
+                .where(function (query) {
-            .preload('identifier')
+                    query.where('server_state', 'published').orWhere('server_state', 'deleted');
-            .orderBy('server_date_published', 'desc');
+                })
+                .preload('titles')
+                .preload('identifier')
+                .orderBy('server_date_published', 'desc');
 
-        return datasets;
+            return response.status(StatusCodes.OK).json(datasets);
+        } catch (error) {
+            return response.status(StatusCodes.INTERNAL_SERVER_ERROR).json({
+                message: error.message || 'Some error occurred while retrieving datasets.',
+            });
+        }
     }
 
+    /**
+     * GET /api/dataset
+     * Find all published datasets
+     */
     public async findAll({ response }: HttpContext) {
         try {
             const datasets = await Dataset.query()
@@ -34,34 +46,279 @@ export default class DatasetController {
         }
     }
 
-    public async findOne({ params }: HttpContext) {
+    /**
-        const datasets = await Dataset.query()
+     * GET /api/dataset/:publish_id
-            .where('publish_id', params.publish_id)
+     * Find one dataset by publish_id
-            .preload('titles')
+     */
-            .preload('descriptions')
+    public async findOne({ response, params }: HttpContext) {
-            .preload('user')
+        try {
-            .preload('authors', (builder) => {
+            const dataset = await Dataset.query()
-                builder.orderBy('pivot_sort_order', 'asc');
+                .where('publish_id', params.publish_id)
-            })
+                .preload('titles')
-            .preload('contributors', (builder) => {
+                .preload('descriptions') // Using 'descriptions' instead of 'abstracts'
-                builder.orderBy('pivot_sort_order', 'asc');
+                .preload('user', (builder) => {
-            })
+                    builder.select(['id', 'firstName', 'lastName', 'avatar', 'login']);
-            .preload('subjects')
+                })
-            .preload('coverage')
+                .preload('authors', (builder) => {
-            .preload('licenses')
+                    builder
-            .preload('references')
+                        .select(['id', 'academic_title', 'first_name', 'last_name', 'identifier_orcid', 'status', 'name_type'])
-            .preload('project')
+                        .withCount('datasets', (query) => {
-            .preload('referenced_by', (builder) => {
+                            query.as('datasets_count');
-                builder.preload('dataset', (builder) => {
+                        })
-                    builder.preload('identifier');
+                        .pivotColumns(['role', 'sort_order'])
-                });
+                        .orderBy('pivot_sort_order', 'asc');
-            })
+                })
-            .preload('files', (builder) => {
+                .preload('contributors', (builder) => {
-                builder.preload('hashvalues');
+                    builder
-            })
+                        .select(['id', 'academic_title', 'first_name', 'last_name', 'identifier_orcid', 'status', 'name_type'])
-            .preload('identifier')
+                        .withCount('datasets', (query) => {
-            .firstOrFail();
+                            query.as('datasets_count');
+                        })
+                        .pivotColumns(['role', 'sort_order', 'contributor_type'])
+                        .orderBy('pivot_sort_order', 'asc');
+                })
+                .preload('subjects')
+                .preload('coverage')
+                .preload('licenses')
+                .preload('references')
+                .preload('project')
+                // .preload('referenced_by', (builder) => {
+                //     builder.preload('dataset', (builder) => {
+                //         builder.preload('identifier');
+                //     });
+                // })
+                .preload('files', (builder) => {
+                    builder.preload('hashvalues');
+                })
+                .preload('identifier')
+                .first(); // Use first() instead of firstOrFail() to handle not found gracefully
 
-        return datasets;
+            if (!dataset) {
+                return response.status(StatusCodes.NOT_FOUND).json({
+                    message: `Cannot find Dataset with publish_id=${params.publish_id}.`,
+                });
+            }
+
+            // Build the version chain
+            const versionChain = await this.buildVersionChain(dataset);
+
+            // Add version chain to response
+            const responseData = {
+                ...dataset.toJSON(),
+                versionChain: versionChain,
+            };
+
+            // return response.status(StatusCodes.OK).json(dataset);
+            return response.status(StatusCodes.OK).json(responseData);
+        } catch (error) {
+            return response.status(StatusCodes.INTERNAL_SERVER_ERROR).json({
+                message: error.message || `Error retrieving Dataset with publish_id=${params.publish_id}.`,
+            });
+        }
+    }
+
+    /**
+     * GET /:prefix/:value
+     * Find dataset by identifier (e.g., https://doi.tethys.at/10.24341/tethys.99.2)
+     */
+    public async findByIdentifier({ response, params }: HttpContext) {
+        const identifierValue = `${params.prefix}/${params.value}`;
+
+        // Optional: Validate DOI format
+        if (!identifierValue.match(/^10\.\d+\/[a-zA-Z0-9._-]+\.[0-9]+(?:\.[0-9]+)*$/)) {
+            return response.status(StatusCodes.BAD_REQUEST).json({
+                message: `Invalid DOI format: ${identifierValue}`,
+            });
+        }
+
+        try {
+            // Method 1: Using subquery with whereIn (most similar to your original)
+            const dataset = await Dataset.query()
+                // .whereIn('id', (subQuery) => {
+                //     subQuery.select('dataset_id').from('dataset_identifiers').where('value', identifierValue);
+                // })
+                .whereHas('identifier', (builder) => {
+                    builder.where('value', identifierValue);
+                })
+                .preload('titles')
+                .preload('descriptions') // Using 'descriptions' instead of 'abstracts'
+                .preload('user', (builder) => {
+                    builder.select(['id', 'firstName', 'lastName', 'avatar', 'login']);
+                })
+                .preload('authors', (builder) => {
+                    builder
+                        .select(['id', 'academic_title', 'first_name', 'last_name', 'identifier_orcid', 'status', 'name_type'])
+                        .withCount('datasets', (query) => {
+                            query.as('datasets_count');
+                        })
+                        .pivotColumns(['role', 'sort_order'])
+                        .wherePivot('role', 'author')
+                        .orderBy('pivot_sort_order', 'asc');
+                })
+                .preload('contributors', (builder) => {
+                    builder
+                        .select(['id', 'academic_title', 'first_name', 'last_name', 'identifier_orcid', 'status', 'name_type'])
+                        .withCount('datasets', (query) => {
+                            query.as('datasets_count');
+                        })
+                        .pivotColumns(['role', 'sort_order', 'contributor_type'])
+                        .wherePivot('role', 'contributor')
+                        .orderBy('pivot_sort_order', 'asc');
+                })
+                .preload('subjects')
+                .preload('coverage')
+                .preload('licenses')
+                .preload('references')
+                .preload('project')
+                // .preload('referenced_by', (builder) => {
+                //     builder.preload('dataset', (builder) => {
+                //         builder.preload('identifier');
+                //     });
+                // })
+                .preload('files', (builder) => {
+                    builder.preload('hashvalues');
+                })
+                .preload('identifier')
+                .first();
+
+            if (!dataset) {
+                return response.status(StatusCodes.NOT_FOUND).json({
+                    message: `Cannot find Dataset with identifier=${identifierValue}.`,
+                });
+            }
+            // Build the version chain
+            const versionChain = await this.buildVersionChain(dataset);
+
+            // Add version chain to response
+            const responseData = {
+                ...dataset.toJSON(),
+                versionChain: versionChain,
+            };
+
+            // return response.status(StatusCodes.OK).json(dataset);
+            return response.status(StatusCodes.OK).json(responseData);
+        } catch (error) {
+            return response.status(StatusCodes.INTERNAL_SERVER_ERROR).json({
+                message: error.message || `Error retrieving Dataset with identifier=${identifierValue}.`,
+            });
+        }
+    }
+
+    /**
+     * Build the complete version chain for a dataset
+     * Traverses both backwards (previous versions) and forwards (newer versions)
+     */
+    private async buildVersionChain(dataset: Dataset) {
+        const versionChain = {
+            current: {
+                id: dataset.id,
+                publish_id: dataset.publish_id,
+                doi: dataset.identifier?.value || null,
+                main_title: dataset.mainTitle || null,
+                server_date_published: dataset.server_date_published,
+            },
+            previousVersions: [] as any[],
+            newerVersions: [] as any[],
+        };
+
+        // Get all previous versions (going backwards in time)
+        versionChain.previousVersions = await this.getPreviousVersions(dataset.id);
+
+        // Get all newer versions (going forwards in time)
+        versionChain.newerVersions = await this.getNewerVersions(dataset.id);
+
+        return versionChain;
+    }
+
+    /**
+     * Recursively get all previous versions
+     */
+    private async getPreviousVersions(datasetId: number, visited: Set<number> = new Set()): Promise<any[]> {
+        // Prevent infinite loops
+        if (visited.has(datasetId)) {
+            return [];
+        }
+        visited.add(datasetId);
+
+        const previousVersions: any[] = [];
+
+        // Find references where this dataset "IsNewVersionOf" another dataset
+        const previousRefs = await DatasetReference.query()
+            .where('document_id', datasetId)
+            .where('relation', 'IsNewVersionOf')
+            .whereNotNull('related_document_id');
+
+        for (const ref of previousRefs) {
+            if (!ref.related_document_id) continue;
+
+            const previousDataset = await Dataset.query()
+                .where('id', ref.related_document_id)
+                .preload('identifier')
+                .preload('titles')
+                .first();
+
+            if (previousDataset) {
+                const versionInfo = {
+                    id: previousDataset.id,
+                    publish_id: previousDataset.publish_id,
+                    doi: previousDataset.identifier?.value || null,
+                    main_title: previousDataset.mainTitle || null,
+                    server_date_published: previousDataset.server_date_published,
+                    relation: 'IsPreviousVersionOf', // From perspective of current dataset
+                };
+
+                previousVersions.push(versionInfo);
+
+                // Recursively get even older versions
+                const olderVersions = await this.getPreviousVersions(previousDataset.id, visited);
+                previousVersions.push(...olderVersions);
+            }
+        }
+
+        return previousVersions;
+    }
+
+    /**
+     * Recursively get all newer versions
+     */
+    private async getNewerVersions(datasetId: number, visited: Set<number> = new Set()): Promise<any[]> {
+        // Prevent infinite loops
+        if (visited.has(datasetId)) {
+            return [];
+        }
+        visited.add(datasetId);
+
+        const newerVersions: any[] = [];
+
+        // Find references where this dataset "IsPreviousVersionOf" another dataset
+        const newerRefs = await DatasetReference.query()
+            .where('document_id', datasetId)
+            .where('relation', 'IsPreviousVersionOf')
+            .whereNotNull('related_document_id');
+
+        for (const ref of newerRefs) {
+            if (!ref.related_document_id) continue;
+
+            const newerDataset = await Dataset.query().where('id', ref.related_document_id).preload('identifier').preload('titles').first();
+
+            if (newerDataset) {
+                const versionInfo = {
+                    id: newerDataset.id,
+                    publish_id: newerDataset.publish_id,
+                    doi: newerDataset.identifier?.value || null,
+                    main_title: newerDataset.mainTitle || null,
+                    server_date_published: newerDataset.server_date_published,
+                    relation: 'IsNewVersionOf', // From perspective of current dataset
+                };
+
+                newerVersions.push(versionInfo);
+
+                // Recursively get even newer versions
+                const evenNewerVersions = await this.getNewerVersions(newerDataset.id, visited);
+                newerVersions.push(...evenNewerVersions);
+            }
+        }
+
+        return newerVersions;
     }
 }

app/Controllers/Http/Api/FileController.ts

@@ -2,53 +2,103 @@ import type { HttpContext } from '@adonisjs/core/http';
 import File from '#models/file';
 import { StatusCodes } from 'http-status-codes';
 import * as fs from 'fs';
-import * as path from 'path';
+import { DateTime } from 'luxon';
 
 // node ace make:controller Author
 export default class FileController {
     // @Get("download/:id")
     public async findOne({ response, params }: HttpContext) {
         const id = params.id;
-        const file = await File.findOrFail(id);
+        // const file = await File.findOrFail(id);
-        // const file = await File.findOne({
+        // Load file with its related dataset to check embargo
-        //     where: { id: id },
+        const file = await File.query()
-        // });
+            .where('id', id)
-        if (file) {
+            .preload('dataset') // or 'dataset' - whatever your relationship is named
-            const filePath = '/storage/app/data/' + file.pathName;
+            .firstOrFail();
-            const ext = path.extname(filePath);
-            const fileName = file.label + ext;
-            try {
-                fs.accessSync(filePath, fs.constants.R_OK); //| fs.constants.W_OK);
-                // console.log("can read/write:", path);
 
-                response
+        if (!file) {
-                    .header('Cache-Control', 'no-cache private')
+            return response.status(StatusCodes.NOT_FOUND).send({
-                    .header('Content-Description', 'File Transfer')
-                    .header('Content-Type', file.mimeType)
-                    .header('Content-Disposition', 'inline; filename=' + fileName)
-                    .header('Content-Transfer-Encoding', 'binary')
-                    .header('Access-Control-Allow-Origin', '*')
-                    .header('Access-Control-Allow-Methods', 'GET,POST');
-                
-                response.status(StatusCodes.OK).download(filePath);               
-            } catch (err) {
-                // console.log("no access:", path);
-                response.status(StatusCodes.NOT_FOUND).send({
-                    message: `File with id ${id} doesn't exist on file server`,
-                });
-            }
-
-            // res.status(StatusCodes.OK).sendFile(filePath, (err) => {
-            //     // res.setHeader("Content-Type", "application/json");
-            //     // res.removeHeader("Content-Disposition");
-            //     res.status(StatusCodes.NOT_FOUND).send({
-            //         message: `File with id ${id} doesn't exist on file server`,
-            //     });
-            // });
-        } else {
-            response.status(StatusCodes.NOT_FOUND).send({
                 message: `Cannot find File with id=${id}.`,
             });
         }
+
+        const dataset = file.dataset;
+        // Files from unpublished datasets are now blocked
+        if (dataset.server_state !== 'published') {
+            return response.status(StatusCodes.FORBIDDEN).send({
+                message: `File access denied: Dataset is not published.`,
+            });
+        }
+        if (dataset && this.isUnderEmbargo(dataset.embargo_date)) {
+            return response.status(StatusCodes.FORBIDDEN).send({
+                message: `File is under embargo until ${dataset.embargo_date?.toFormat('yyyy-MM-dd')}`,
+            });
+        }
+
+        // Proceed with file download
+        const filePath = '/storage/app/data/' + file.pathName;
+        const fileExt = file.filePath.split('.').pop() || '';
+        // const fileName = file.label + fileExt;
+        const fileName = file.label.toLowerCase().endsWith(`.${fileExt.toLowerCase()}`) ? file.label : `${file.label}.${fileExt}`;
+
+        // Determine if file can be previewed inline in browser
+        const canPreviewInline = (mimeType: string): boolean => {
+            const type = mimeType.toLowerCase();
+            return (
+                type === 'application/pdf' ||
+                type.startsWith('image/') ||
+                type.startsWith('text/') ||
+                type === 'application/json' ||
+                type === 'application/xml' ||
+                // Uncomment if you want video/audio inline
+                type.startsWith('video/') ||
+                type.startsWith('audio/')
+            );
+        };
+        const disposition = canPreviewInline(file.mimeType) ? 'inline' : 'attachment';
+
+        try {
+            fs.accessSync(filePath, fs.constants.R_OK); //| fs.constants.W_OK);
+            // console.log("can read/write:", filePath);
+
+            response
+                .header('Cache-Control', 'no-cache private')
+                .header('Content-Description', 'File Transfer')
+                .header('Content-Type', file.mimeType)
+                .header('Content-Disposition', `${disposition}; filename="${fileName}"`)
+                .header('Content-Transfer-Encoding', 'binary')
+                .header('Access-Control-Allow-Origin', '*')
+                .header('Access-Control-Allow-Methods', 'GET');
+
+            response.status(StatusCodes.OK).download(filePath);
+        } catch (err) {
+            // console.log("no access:", path);
+            response.status(StatusCodes.NOT_FOUND).send({
+                message: `File with id ${id} doesn't exist on file server`,
+            });
+        }
+    }
+
+    /**
+     * Check if the dataset is under embargo
+     * Compares only dates (ignoring time) for embargo check
+     * @param embargoDate - The embargo date from dataset
+     * @returns true if under embargo, false if embargo has passed or no embargo set
+     */
+    private isUnderEmbargo(embargoDate: DateTime | null): boolean {
+        // No embargo date set - allow download
+        if (!embargoDate) {
+            return false;
+        }
+
+        // Get current date at start of day (00:00:00)
+        const today = DateTime.now().startOf('day');
+
+        // Get embargo date at start of day (00:00:00)
+        const embargoDateOnly = embargoDate.startOf('day');
+
+        // File is under embargo if embargo date is after today
+        // This means the embargo lifts at the start of the embargo date
+        return embargoDateOnly >= today;
     }
 }

app/Controllers/Http/Editor/DatasetController.ts

@@ -3,7 +3,7 @@ import { Client } from '@opensearch-project/opensearch';
 import User from '#models/user';
 import Dataset from '#models/dataset';
 import DatasetIdentifier from '#models/dataset_identifier';
-import XmlModel from '#app/Library/XmlModel';
+import DatasetXmlSerializer from '#app/Library/DatasetXmlSerializer';
 import { XMLBuilder } from 'xmlbuilder2/lib/interfaces.js';
 import { create } from 'xmlbuilder2';
 import { readFileSync } from 'fs';
@@ -252,7 +252,6 @@ export default class DatasetsController {
             dataset.reject_editor_note = null;
         }
 
-
         //save main and additional titles
         const reviewer_id = request.input('reviewer_id', null);
         dataset.reviewer_id = reviewer_id;
@@ -290,8 +289,6 @@ export default class DatasetsController {
         });
     }
 
-
-
     public async rejectUpdate({ request, response, auth }: HttpContext) {
         const authUser = auth.user!;
 
@@ -402,8 +399,6 @@ export default class DatasetsController {
                 .back();
         }
 
-       
-
         return inertia.render('Editor/Dataset/Publish', {
             dataset,
             can: {
@@ -555,7 +550,6 @@ export default class DatasetsController {
             }
         }
 
-       
         return response
             .flash(
                 `You have successfully rejected dataset ${dataset.id} reviewed by ${dataset.reviewer.login}.${emailStatusMessage}`,
@@ -580,53 +574,88 @@ export default class DatasetsController {
 
     public async doiStore({ request, response }: HttpContext) {
         const dataId = request.param('publish_id');
-        const dataset = await Dataset.query()
+
-            // .preload('xmlCache')
+        // Load dataset with minimal required relationships
-            .where('publish_id', dataId)
+        const dataset = await Dataset.query().where('publish_id', dataId).firstOrFail();
-            .firstOrFail();
+
+        const prefix = process.env.DATACITE_PREFIX || '';
+        const base_domain = process.env.BASE_DOMAIN || '';
+
+        // Generate DOI metadata XML
         const xmlMeta = (await Index.getDoiRegisterString(dataset)) as string;
 
-        let prefix = '';
+        // Prepare DOI registration data
-        let base_domain = '';
+        const doiValue = `${prefix}/tethys.${dataset.publish_id}`; //'10.21388/tethys.213'
-        // const datacite_environment = process.env.DATACITE_ENVIRONMENT || 'debug';
+        const landingPageUrl = `https://doi.${getDomain(base_domain)}/${prefix}/tethys.${dataset.publish_id}`; //https://doi.dev.tethys.at/10.21388/tethys.213
-        prefix = process.env.DATACITE_PREFIX || '';
-        base_domain = process.env.BASE_DOMAIN || '';
 
-        // register DOI:
+        // Register DOI with DataCite
-        const doiValue = prefix + '/tethys.' + dataset.publish_id; //'10.21388/tethys.213'
-        const landingPageUrl = 'https://doi.' + getDomain(base_domain) + '/' + prefix + '/tethys.' + dataset.publish_id; //https://doi.dev.tethys.at/10.21388/tethys.213
         const doiClient = new DoiClient();
         const dataciteResponse = await doiClient.registerDoi(doiValue, xmlMeta, landingPageUrl);
 
-        if (dataciteResponse?.status === 201) {
+        if (dataciteResponse?.status !== 201) {
-            // if response OK 201; save the Identifier value into db
-            const doiIdentifier = new DatasetIdentifier();
-            doiIdentifier.value = doiValue;
-            doiIdentifier.dataset_id = dataset.id;
-            doiIdentifier.type = 'doi';
-            doiIdentifier.status = 'findable';
-            // save modified date of datset for re-caching model in db an update the search index
-            dataset.server_date_modified = DateTime.now();
-
-            // save updated dataset to db an index to OpenSearch
-            try {
-                await dataset.related('identifier').save(doiIdentifier);
-                const index_name = 'tethys-records';
-                await Index.indexDocument(dataset, index_name);
-            } catch (error) {
-                logger.error(`${__filename}: Indexing document ${dataset.id} failed: ${error.message}`);
-                // Log the error or handle it as needed
-                throw new HttpException(error.message);
-            }
-            return response.toRoute('editor.dataset.list').flash('message', 'You have successfully created a DOI for the dataset!');
-        } else {
             const message = `Unexpected DataCite MDS response code ${dataciteResponse?.status}`;
-            // Log the error or handle it as needed
             throw new DoiClientException(dataciteResponse?.status, message);
         }
+
+        // DOI registration successful - persist and index
+        try {
+            // Save identifier
+            await this.persistDoiAndIndex(dataset, doiValue);
+
+            return response.toRoute('editor.dataset.list').flash('message', 'You have successfully created a DOI for the dataset!');
+        } catch (error) {
+            logger.error(`${__filename}: Failed to persist DOI and index dataset ${dataset.id}: ${error.message}`);
+            throw new HttpException(error.message);
+        }
+
         // return response.toRoute('editor.dataset.list').flash('message', xmlMeta);
     }
 
+    /**
+     * Persist DOI identifier and update search index
+     * Handles cache invalidation to ensure fresh indexing
+     */
+    private async persistDoiAndIndex(dataset: Dataset, doiValue: string): Promise<void> {
+        // Create DOI identifier
+        const doiIdentifier = new DatasetIdentifier();
+        doiIdentifier.value = doiValue;
+        doiIdentifier.dataset_id = dataset.id;
+        doiIdentifier.type = 'doi';
+        doiIdentifier.status = 'findable';
+
+        // Save identifier (this will trigger database insert)
+        await dataset.related('identifier').save(doiIdentifier);
+
+        // Update dataset modification timestamp to reflect the change
+        dataset.server_date_modified = DateTime.now();
+        await dataset.save();
+
+        // Invalidate stale XML cache
+        await this.invalidateDatasetCache(dataset);
+
+        // Reload dataset with fresh state for indexing
+        const freshDataset = await Dataset.query().where('id', dataset.id).preload('identifier').preload('xmlCache').firstOrFail();
+
+        // Index to OpenSearch with fresh data
+        const index_name = process.env.OPENSEARCH_INDEX || 'tethys-records';
+        await Index.indexDocument(freshDataset, index_name);
+
+        logger.info(`Successfully created DOI ${doiValue} and indexed dataset ${dataset.id}`);
+    }
+
+    /**
+     * Invalidate XML cache for dataset
+     * Ensures fresh cache generation on next access
+     */
+    private async invalidateDatasetCache(dataset: Dataset): Promise<void> {
+        await dataset.load('xmlCache');
+
+        if (dataset.xmlCache) {
+            await dataset.xmlCache.delete();
+            logger.debug(`Invalidated XML cache for dataset ${dataset.id}`);
+        }
+    }
+
     public async show({}: HttpContext) {}
 
     public async edit({ request, inertia, response }: HttpContext) {
@@ -900,6 +929,7 @@ export default class DatasetsController {
             const input = request.only(['project_id', 'embargo_date', 'language', 'type', 'creating_corporation']);
             // dataset.type = request.input('type');
             dataset.merge(input);
+            dataset.server_date_modified = DateTime.now();
             // let test: boolean = dataset.$isDirty;
             await dataset.useTransaction(trx).save();
 
@@ -1121,9 +1151,20 @@ export default class DatasetsController {
         // const filePath =  await drive.use('local').getUrl('/'+ file.filePath)
         const filePath = file.filePath;
         const fileExt = file.filePath.split('.').pop() || '';
+
+        // Check if label already includes the extension
+        const fileName = file.label.toLowerCase().endsWith(`.${fileExt.toLowerCase()}`) ? file.label : `${file.label}.${fileExt}`;
+
         // Set the response headers and download the file
-        response.header('Content-Type', file.mime_type || 'application/octet-stream');
+        response
-        response.attachment(`${file.label}.${fileExt}`);
+            .header('Cache-Control', 'no-cache private')
+            .header('Content-Description', 'File Transfer')
+            .header('Content-Type', file.mime_type || 'application/octet-stream')
+            //  .header('Content-Disposition', 'inline; filename=' + fileName)
+            .header('Content-Transfer-Encoding', 'binary')
+            .header('Access-Control-Allow-Origin', '*')
+            .header('Access-Control-Allow-Methods', 'GET');
+        response.attachment(fileName);
         return response.download(filePath);
     }
 
@@ -1136,19 +1177,18 @@ export default class DatasetsController {
         }
     }
 
-    private async getDatasetXmlDomNode(dataset: Dataset) {
+    private async getDatasetXmlDomNode(dataset: Dataset): Promise<XMLBuilder | null> {
-        const xmlModel = new XmlModel(dataset);
+        const serializer = new DatasetXmlSerializer(dataset).enableCaching().excludeEmptyFields();
         // xmlModel.setModel(dataset);
-        xmlModel.excludeEmptyFields();
+
-        xmlModel.caching = true;
+        // Load existing cache if available
-        // const cache = dataset.xmlCache ? dataset.xmlCache : null;
+        await dataset.load('xmlCache');
-        // dataset.load('xmlCache');
         if (dataset.xmlCache) {
-            xmlModel.xmlCache = dataset.xmlCache;
+            serializer.setCache(dataset.xmlCache);
         }
 
         // return cache.getDomDocument();
-        const domDocument: XMLBuilder | null = await xmlModel.getDomDocument();
+        const xmlDocument : XMLBuilder | null = await serializer.toXmlDocument();
-        return domDocument;
+        return xmlDocument;
     }
 }

app/Controllers/Http/Oai/OaiController.ts

@@ -15,7 +15,7 @@ import { OaiModelException, BadOaiModelException } from '#app/exceptions/OaiMode
 import Dataset from '#models/dataset';
 import Collection from '#models/collection';
 import { getDomain, preg_match } from '#app/utils/utility-functions';
-import XmlModel from '#app/Library/XmlModel';
+import DatasetXmlSerializer from '#app/Library/DatasetXmlSerializer';
 import logger from '@adonisjs/core/services/logger';
 import ResumptionToken from '#app/Library/Oai/ResumptionToken';
 // import Config from '@ioc:Adonis/Core/Config';
@@ -292,7 +292,7 @@ export default class OaiController {
         this.xsltParameter['repIdentifier'] = repIdentifier;
         const datasetNode = this.xml.root().ele('Datasets');
 
-        const paginationParams: PagingParameter ={
+        const paginationParams: PagingParameter = {
             cursor: 0,
             totalLength: 0,
             start: maxRecords + 1,
@@ -347,16 +347,20 @@ export default class OaiController {
         finder: ModelQueryBuilderContract<typeof Dataset, Dataset>,
         paginationParams: PagingParameter,
         oaiRequest: Dictionary,
-        maxRecords: number
+        maxRecords: number,
     ) {
         const totalResult = await finder
             .clone()
             .count('* as total')
             .first()
             .then((res) => res?.$extras.total);
-            paginationParams.totalLength = Number(totalResult);
+        paginationParams.totalLength = Number(totalResult);
 
-        const combinedRecords: Dataset[] = await finder.select('publish_id').orderBy('publish_id').offset(0).limit(maxRecords*2);
+        const combinedRecords: Dataset[] = await finder
+            .select('publish_id')
+            .orderBy('publish_id')
+            .offset(0)
+            .limit(maxRecords * 2);
 
         paginationParams.activeWorkIds = combinedRecords.slice(0, 100).map((dat) => Number(dat.publish_id));
         paginationParams.nextDocIds = combinedRecords.slice(100).map((dat) => Number(dat.publish_id));
@@ -602,19 +606,17 @@ export default class OaiController {
     }
 
     private async getDatasetXmlDomNode(dataset: Dataset) {
-        const xmlModel = new XmlModel(dataset);
+        const serializer = new DatasetXmlSerializer(dataset).enableCaching().excludeEmptyFields();
-        // xmlModel.setModel(dataset);
+
-        xmlModel.excludeEmptyFields();
-        xmlModel.caching = true;
         // const cache = dataset.xmlCache ? dataset.xmlCache : null;
         // dataset.load('xmlCache');
         if (dataset.xmlCache) {
-            xmlModel.xmlCache = dataset.xmlCache;
+            serializer.setCache(dataset.xmlCache);
         }
 
-        // return cache.getDomDocument();
+        // return cache.toXmlDocument();
-        const domDocument: XMLBuilder | null = await xmlModel.getDomDocument();
+        const xmlDocument: XMLBuilder | null = await serializer.toXmlDocument();
-        return domDocument;
+        return xmlDocument;
     }
 
     private addSpecInformation(domNode: XMLBuilder, information: string) {

app/Controllers/Http/Reviewer/DatasetController.ts

@@ -113,7 +113,6 @@ export default class DatasetsController {
                 reject: await auth.user?.can(['dataset-review-reject']),
             },
         });
-
     }
 
     public async review_old({ request, inertia, response, auth }: HttpContext) {
@@ -370,6 +369,19 @@ export default class DatasetsController {
             .flash(`You have rejected dataset ${dataset.id}! to editor ${dataset.editor.login}`, 'message');
     }
 
+    // public async download({ params, response }: HttpContext) {
+    //     const id = params.id;
+    //     // Find the file by ID
+    //     const file = await File.findOrFail(id);
+    //     // const filePath =  await drive.use('local').getUrl('/'+ file.filePath)
+    //     const filePath = file.filePath;
+    //     const fileExt = file.filePath.split('.').pop() || '';
+    //     // Set the response headers and download the file
+    //     response.header('Content-Type', file.mime_type || 'application/octet-stream');
+    //     response.attachment(`${file.label}.${fileExt}`);
+    //     return response.download(filePath);
+    // }
+
     public async download({ params, response }: HttpContext) {
             const id = params.id;
             // Find the file by ID
@@ -377,9 +389,20 @@ export default class DatasetsController {
             // const filePath =  await drive.use('local').getUrl('/'+ file.filePath)
             const filePath = file.filePath;
             const fileExt = file.filePath.split('.').pop() || '';
+    
+            // Check if label already includes the extension
+            const fileName = file.label.toLowerCase().endsWith(`.${fileExt.toLowerCase()}`) ? file.label : `${file.label}.${fileExt}`;
+    
             // Set the response headers and download the file
-            response.header('Content-Type', file.mime_type || 'application/octet-stream');
+            response
-            response.attachment(`${file.label}.${fileExt}`);
+                .header('Cache-Control', 'no-cache private')
+                .header('Content-Description', 'File Transfer')
+                .header('Content-Type', file.mime_type || 'application/octet-stream')
+                //  .header('Content-Disposition', 'inline; filename=' + fileName)
+                .header('Content-Transfer-Encoding', 'binary')
+                .header('Access-Control-Allow-Origin', '*')
+                .header('Access-Control-Allow-Methods', 'GET');
+            response.attachment(fileName);
             return response.download(filePath);
         }
 }

app/Controllers/Http/Submitter/DatasetController.ts

@@ -105,6 +105,7 @@ export default class DatasetController {
                 'reviewed',
                 'rejected_editor',
                 'rejected_reviewer',
+                'rejected_to_reviewer',
             ])
             .where('account_id', user.id)
             .preload('titles')
@@ -233,8 +234,9 @@ export default class DatasetController {
                             .email()
                             .normalizeEmail()
                             .isUniquePerson({ table: 'persons', column: 'email', idField: 'id' }),
-                        first_name: vine.string().trim().minLength(3).maxLength(255),
+                        first_name: vine.string().trim().minLength(3).maxLength(255).optional().requiredWhen('name_type', '=', 'Personal'),
                         last_name: vine.string().trim().minLength(3).maxLength(255),
+                        identifier_orcid: vine.string().trim().maxLength(255).orcid().optional(),
                     }),
                 )
                 .minLength(1)
@@ -249,8 +251,9 @@ export default class DatasetController {
                             .email()
                             .normalizeEmail()
                             .isUniquePerson({ table: 'persons', column: 'email', idField: 'id' }),
-                        first_name: vine.string().trim().minLength(3).maxLength(255),
+                        first_name: vine.string().trim().minLength(3).maxLength(255).optional().requiredWhen('name_type', '=', 'Personal'),
                         last_name: vine.string().trim().minLength(3).maxLength(255),
+                        identifier_orcid: vine.string().trim().maxLength(255).orcid().optional(),
                         pivot_contributor_type: vine.enum(Object.keys(ContributorTypes)),
                     }),
                 )
@@ -324,8 +327,9 @@ export default class DatasetController {
                             .email()
                             .normalizeEmail()
                             .isUniquePerson({ table: 'persons', column: 'email', idField: 'id' }),
-                        first_name: vine.string().trim().minLength(3).maxLength(255),
+                        first_name: vine.string().trim().minLength(3).maxLength(255).optional().requiredWhen('name_type', '=', 'Personal'),
                         last_name: vine.string().trim().minLength(3).maxLength(255),
+                        identifier_orcid: vine.string().trim().maxLength(255).orcid().optional(),
                     }),
                 )
                 .minLength(1)
@@ -340,8 +344,9 @@ export default class DatasetController {
                             .email()
                             .normalizeEmail()
                             .isUniquePerson({ table: 'persons', column: 'email', idField: 'id' }),
-                        first_name: vine.string().trim().minLength(3).maxLength(255),
+                        first_name: vine.string().trim().minLength(3).maxLength(255).optional().requiredWhen('name_type', '=', 'Personal'),
                         last_name: vine.string().trim().minLength(3).maxLength(255),
+                        identifier_orcid: vine.string().trim().maxLength(255).orcid().optional(),
                         pivot_contributor_type: vine.enum(Object.keys(ContributorTypes)),
                     }),
                 )
@@ -983,19 +988,6 @@ export default class DatasetController {
         const years = Array.from({ length: currentYear - 1990 + 1 }, (_, index) => 1990 + index);
 
         const licenses = await License.query().select('id', 'name_long').where('active', 'true').pluck('name_long', 'id');
-        // const userHasRoles = user.roles;
-        // const datasetHasLicenses = await dataset.related('licenses').query().pluck('id');
-        // const checkeds = dataset.licenses.first().id;
-
-        // const doctypes = {
-        //     analysisdata: { label: 'Analysis', value: 'analysisdata' },
-        //     measurementdata: { label: 'Measurements', value: 'measurementdata' },
-        //     monitoring: 'Monitoring',
-        //     remotesensing: 'Remote Sensing',
-        //     gis: 'GIS',
-        //     models: 'Models',
-        //     mixedtype: 'Mixed Type',
-        // };
 
         return inertia.render('Submitter/Dataset/Edit', {
             dataset,
@@ -1163,42 +1155,93 @@ export default class DatasetController {
                 }
             }
 
-            // Process all subjects/keywords from the request
+            // ============================================
-            const subjects = request.input('subjects');
+            // IMPROVED SUBJECTS PROCESSING
+            // ============================================
+            const subjects = request.input('subjects', []);
+            const currentDatasetSubjectIds = new Set<number>();
+
             for (const subjectData of subjects) {
-                // Case 1: Subject already exists in the database (has an ID)
+                let subjectToRelate: Subject;
+
+                // Case 1: Subject has an ID (existing subject being updated)
                 if (subjectData.id) {
-                    // Retrieve the existing subject
                     const existingSubject = await Subject.findOrFail(subjectData.id);
 
-                    // Update subject properties from the request data
+                    // Check if the updated value conflicts with another existing subject
-                    existingSubject.value = subjectData.value;
+                    const duplicateSubject = await Subject.query()
-                    existingSubject.type = subjectData.type;
+                        .where('value', subjectData.value)
-                    existingSubject.external_key = subjectData.external_key;
+                        .where('type', subjectData.type)
+                        .where('language', subjectData.language || 'en') // Default language if not provided
+                        .where('id', '!=', subjectData.id) // Exclude the current subject
+                        .first();
 
-                    // Only save if there are actual changes
+                    if (duplicateSubject) {
-                    if (existingSubject.$isDirty) {
+                        // A duplicate exists - use the existing duplicate instead
-                        await existingSubject.save();
+                        subjectToRelate = duplicateSubject;
+
+                        // Check if the original subject should be deleted (if it's only used by this dataset)
+                        const originalSubjectUsage = await Subject.query()
+                            .where('id', existingSubject.id)
+                            .withCount('datasets')
+                            .firstOrFail();
+
+                        if (originalSubjectUsage.$extras.datasets_count <= 1) {
+                            // Only used by this dataset, safe to delete after detaching
+                            await dataset.useTransaction(trx).related('subjects').detach([existingSubject.id]);
+                            await existingSubject.useTransaction(trx).delete();
+                        } else {
+                            // Used by other datasets, just detach from this one
+                            await dataset.useTransaction(trx).related('subjects').detach([existingSubject.id]);
+                        }
+                    } else {
+                        // No duplicate found, update the existing subject
+                        existingSubject.value = subjectData.value;
+                        existingSubject.type = subjectData.type;
+                        existingSubject.language = subjectData.language;
+                        existingSubject.external_key = subjectData.external_key;
+
+                        if (existingSubject.$isDirty) {
+                            await existingSubject.useTransaction(trx).save();
+                        }
+
+                        subjectToRelate = existingSubject;
                     }
-
-                    // Note: The relationship between dataset and subject is already established,
-                    // so we don't need to attach it again
                 }
                 // Case 2: New subject being added (no ID)
                 else {
-                    // Check if a subject with the same value and type already exists in the database
+                    // Use firstOrNew to either find existing or create new subject
-                    const subject = await Subject.firstOrNew({ value: subjectData.value, type: subjectData.type }, subjectData);
+                    subjectToRelate = await Subject.firstOrNew(
+                        {
+                            value: subjectData.value,
+                            type: subjectData.type,
+                            language: subjectData.language || 'en',
+                        },
+                        {
+                            value: subjectData.value,
+                            type: subjectData.type,
+                            language: subjectData.language || 'en',
+                            external_key: subjectData.external_key,
+                        },
+                    );
 
-                    if (subject.$isNew === true) {
+                    if (subjectToRelate.$isNew) {
-                        // If it's a completely new subject, create and associate it with the dataset
+                        await subjectToRelate.useTransaction(trx).save();
-                        await dataset.useTransaction(trx).related('subjects').save(subject);
-                    } else {
-                        // If the subject already exists, just create the relationship
-                        await dataset.useTransaction(trx).related('subjects').attach([subject.id]);
                     }
                 }
+
+                // Ensure the relationship exists between dataset and subject
+                const relationshipExists = await dataset.related('subjects').query().where('subject_id', subjectToRelate.id).first();
+
+                if (!relationshipExists) {
+                    await dataset.useTransaction(trx).related('subjects').attach([subjectToRelate.id]);
+                }
+
+                // Track which subjects should remain associated with this dataset
+                currentDatasetSubjectIds.add(subjectToRelate.id);
             }
 
+            // Handle explicit deletions
             const subjectsToDelete = request.input('subjectsToDelete', []);
             for (const subjectData of subjectsToDelete) {
                 if (subjectData.id) {
@@ -1211,16 +1254,16 @@ export default class DatasetController {
                         .withCount('datasets')
                         .firstOrFail();
 
-                    // Check if the subject is used by multiple datasets
+                    // Detach the subject from this dataset
-                    if (subject.$extras.datasets_count > 1) {
+                    await dataset.useTransaction(trx).related('subjects').detach([subject.id]);
-                        // If used by multiple datasets, just detach it from the current dataset
-                        await dataset.useTransaction(trx).related('subjects').detach([subject.id]);
-                    } else {
-                        // If only used by this dataset, delete the subject completely
 
-                        await dataset.useTransaction(trx).related('subjects').detach([subject.id]);
+                    // If this was the only dataset using this subject, delete it entirely
+                    if (subject.$extras.datasets_count <= 1) {
                         await subject.useTransaction(trx).delete();
                     }
+
+                    // Remove from current set if it was added earlier
+                    currentDatasetSubjectIds.delete(subjectData.id);
                 }
             }
 

app/Library/DatasetXmlSerializer.ts

@@ -0,0 +1,231 @@
+import DocumentXmlCache from '#models/DocumentXmlCache';
+import { XMLBuilder } from 'xmlbuilder2/lib/interfaces.js';
+import Dataset from '#models/dataset';
+import Strategy from './Strategy.js';
+import { builder } from 'xmlbuilder2';
+import logger from '@adonisjs/core/services/logger';
+
+/**
+ * Configuration for XML serialization
+ *
+ * @interface XmlSerializationConfig
+ */
+export interface XmlSerializationConfig {
+    /** The dataset model to serialize */
+    model: Dataset;
+    /** DOM representation (if available) */
+    dom?: XMLBuilder;
+    /** Fields to exclude from serialization */
+    excludeFields: Array<string>;
+    /** Whether to exclude empty fields */
+    excludeEmpty: boolean;
+    /** Base URI for xlink:ref elements */
+    baseUri: string;
+}
+
+/**
+ * Options for controlling serialization behavior
+ */
+export interface SerializationOptions {
+    /** Enable XML caching */
+    enableCaching?: boolean;
+    /** Exclude empty fields from output */
+    excludeEmptyFields?: boolean;
+    /** Custom base URI */
+    baseUri?: string;
+    /** Fields to exclude */
+    excludeFields?: string[];
+}
+
+/**
+ * DatasetXmlSerializer
+ *
+ * Handles XML serialization of Dataset models with intelligent caching.
+ * Generates XML representations and manages cache lifecycle to optimize performance.
+ *
+ * @example
+ * ```typescript
+ * const serializer = new DatasetXmlSerializer(dataset);
+ * serializer.enableCaching();
+ * serializer.excludeEmptyFields();
+ *
+ * const xmlDocument = await serializer.toXmlDocument();
+ * ```
+ */
+export default class DatasetXmlSerializer {
+    private readonly config: XmlSerializationConfig;
+    private readonly strategy: Strategy;
+    private cache: DocumentXmlCache | null = null;
+    private cachingEnabled = false;
+
+    constructor(dataset: Dataset, options: SerializationOptions = {}) {
+        this.config = {
+            model: dataset,
+            excludeEmpty: options.excludeEmptyFields ?? false,
+            baseUri: options.baseUri ?? '',
+            excludeFields: options.excludeFields ?? [],
+        };
+
+        this.strategy = new Strategy({
+            excludeEmpty: options.excludeEmptyFields ?? false,
+            baseUri: options.baseUri ?? '',
+            excludeFields: options.excludeFields ?? [],
+            model: dataset,
+        });
+
+        if (options.enableCaching) {
+            this.cachingEnabled = true;
+        }
+    }
+
+    /**
+     * Enable caching for XML generation
+     * When enabled, generated XML is stored in database for faster retrieval
+     */
+    public enableCaching(): this {
+        this.cachingEnabled = true;
+        return this;
+    }
+
+    /**
+     * Disable caching for XML generation
+     */
+    public disableCaching(): this {
+        this.cachingEnabled = false;
+        return this;
+    }
+
+    set model(model: Dataset) {
+        this.config.model = model;
+    }
+
+    /**
+     * Configure to exclude empty fields from XML output
+     */
+    public excludeEmptyFields(): this {
+        this.config.excludeEmpty = true;
+        return this;
+    }
+
+    /**
+     * Set the cache instance directly (useful when preloading)
+     * @param cache - The DocumentXmlCache instance
+     */
+    public setCache(cache: DocumentXmlCache): this {
+        this.cache = cache;
+        return this;
+    }
+
+    /**
+     * Get the current cache instance
+     */
+    public getCache(): DocumentXmlCache | null {
+        return this.cache;
+    }
+
+    /**
+     * Get DOM document with intelligent caching
+     * Returns cached version if valid, otherwise generates new document
+     */
+    public async toXmlDocument(): Promise<XMLBuilder | null> {
+        const dataset = this.config.model;
+
+        // Try to get from cache first
+        let cachedDocument: XMLBuilder | null = await this.retrieveFromCache();
+
+        if (cachedDocument) {
+            logger.debug(`Using cached XML for dataset ${dataset.id}`);
+            return cachedDocument;
+        }
+
+        // Generate fresh document
+        logger.debug(`[DatasetXmlSerializer] Cache miss - generating fresh XML for dataset ${dataset.id}`);
+        const freshDocument = await this.strategy.createDomDocument();
+
+        if (!freshDocument) {
+            logger.error(`[DatasetXmlSerializer] Failed to generate XML for dataset ${dataset.id}`);
+            return null;
+        }
+
+        // Cache if caching is enabled
+        if (this.cachingEnabled) {
+            await this.persistToCache(freshDocument, dataset);
+        }
+
+        // Extract the dataset-specific node
+        return this.extractDatasetNode(freshDocument);
+    }
+
+    /**
+     * Generate XML string representation
+     * Convenience method that converts XMLBuilder to string
+     */
+    public async toXmlString(): Promise<string | null> {
+        const document = await this.toXmlDocument();
+        return document ? document.end({ prettyPrint: false }) : null;
+    }
+
+    /**
+     * Persist generated XML document to cache
+     * Non-blocking - failures are logged but don't interrupt the flow
+     */
+    private async persistToCache(domDocument: XMLBuilder, dataset: Dataset): Promise<void> {
+        try {
+            this.cache = this.cache || new DocumentXmlCache();
+            this.cache.document_id = dataset.id;
+            this.cache.xml_version = 1;
+            this.cache.server_date_modified = dataset.server_date_modified.toFormat('yyyy-MM-dd HH:mm:ss');
+            this.cache.xml_data = domDocument.end();
+
+            await this.cache.save();
+            logger.debug(`Cached XML for dataset ${dataset.id}`);
+        } catch (error) {
+            logger.error(`Failed to cache XML for dataset ${dataset.id}: ${error.message}`);
+            // Don't throw - caching failure shouldn't break the flow
+        }
+    }
+
+    /**
+     * Extract the Rdr_Dataset node from full document
+     */
+    private extractDatasetNode(domDocument: XMLBuilder): XMLBuilder | null {
+        const node = domDocument.find((n) => n.node.nodeName === 'Rdr_Dataset', false, true)?.node;
+
+        if (node) {
+            return builder({ version: '1.0', encoding: 'UTF-8', standalone: true }, node);
+        }
+
+        return domDocument;
+    }
+
+    /**
+     * Attempt to retrieve valid cached XML document
+     * Returns null if cache doesn't exist or is stale
+     */
+    private async retrieveFromCache(): Promise<XMLBuilder | null> {
+        const dataset: Dataset = this.config.model;
+        if (!this.cache) {
+            return null;
+        }
+
+        // Check if cache is still valid
+        const actuallyCached = await DocumentXmlCache.hasValidEntry(dataset.id, dataset.server_date_modified);
+
+        if (!actuallyCached) {
+            logger.debug(`Cache invalid for dataset ${dataset.id}`);
+            return null;
+        }
+
+        //cache is actual return cached document
+        try {
+            if (this.cache) {
+                return this.cache.getDomDocument();
+            } else {
+                return null;
+            }
+        } catch (error) {
+            logger.error(`Failed to retrieve cached document for dataset ${dataset.id}: ${error.message}`);
+            return null;
+        }
+    }
+}

app/Library/Doi/DoiClient.ts

@@ -1,6 +1,3 @@
-// import { Client } from 'guzzle';
-// import { Log } from '@adonisjs/core/build/standalone';
-// import { DoiInterface } from './interfaces/DoiInterface';
 import DoiClientContract from '#app/Library/Doi/DoiClientContract';
 import DoiClientException from '#app/exceptions/DoiClientException';
 import { StatusCodes } from 'http-status-codes';
@@ -12,14 +9,14 @@ export class DoiClient implements DoiClientContract {
     public username: string;
     public password: string;
     public serviceUrl: string;
+    public apiUrl: string;
 
     constructor() {
         // const datacite_environment = process.env.DATACITE_ENVIRONMENT || 'debug';
         this.username = process.env.DATACITE_USERNAME || '';
         this.password = process.env.DATACITE_PASSWORD || '';
         this.serviceUrl = process.env.DATACITE_SERVICE_URL || '';
-        // this.prefix = process.env.DATACITE_PREFIX || '';
+        this.apiUrl = process.env.DATACITE_API_URL || 'https://api.datacite.org';
-        // this.base_domain = process.env.BASE_DOMAIN || '';
 
         if (this.username === '' || this.password === '' || this.serviceUrl === '') {
             const message = 'issing configuration settings to properly initialize DOI client';
@@ -90,4 +87,240 @@ export class DoiClient implements DoiClientContract {
             throw new DoiClientException(error.response.status, error.response.data);
         }
     }
+
+    /**
+     * Retrieves DOI information from DataCite REST API
+     *
+     * @param doiValue The DOI identifier e.g. '10.5072/tethys.999'
+     * @returns Promise with DOI information or null if not found
+     */
+    public async getDoiInfo(doiValue: string): Promise<any | null> {
+        try {
+            // Use configurable DataCite REST API URL
+            const dataciteApiUrl = `${this.apiUrl}/dois/${doiValue}`;
+            const response = await axios.get(dataciteApiUrl, {
+                headers: {
+                    Accept: 'application/vnd.api+json',
+                },
+            });
+
+            if (response.status === 200 && response.data.data) {
+                return {
+                    created: response.data.data.attributes.created,
+                    registered: response.data.data.attributes.registered,
+                    updated: response.data.data.attributes.updated,
+                    published: response.data.data.attributes.published,
+                    state: response.data.data.attributes.state,
+                    url: response.data.data.attributes.url,
+                    metadata: response.data.data.attributes,
+                };
+            }
+        } catch (error) {
+            if (error.response?.status === 404) {
+                logger.debug(`DOI ${doiValue} not found in DataCite`);
+                return null;
+            }
+
+            logger.debug(`DataCite REST API failed for ${doiValue}: ${error.message}`);
+
+            // Fallback to MDS API
+            return await this.getDoiInfoFromMds(doiValue);
+        }
+
+        return null;
+    }
+
+    /**
+     * Fallback method to get DOI info from MDS API
+     *
+     * @param doiValue The DOI identifier
+     * @returns Promise with basic DOI information or null
+     */
+    private async getDoiInfoFromMds(doiValue: string): Promise<any | null> {
+        try {
+            const auth = {
+                username: this.username,
+                password: this.password,
+            };
+
+            // Get DOI URL
+            const doiResponse = await axios.get(`${this.serviceUrl}/doi/${doiValue}`, { auth });
+
+            if (doiResponse.status === 200) {
+                // Get metadata if available
+                try {
+                    const metadataResponse = await axios.get(`${this.serviceUrl}/metadata/${doiValue}`, {
+                        auth,
+                        headers: {
+                            Accept: 'application/xml',
+                        },
+                    });
+
+                    return {
+                        url: doiResponse.data.trim(),
+                        metadata: metadataResponse.data,
+                        created: new Date().toISOString(), // MDS doesn't provide creation dates
+                        registered: new Date().toISOString(), // Use current time as fallback
+                        source: 'mds',
+                    };
+                } catch (metadataError) {
+                    // Return basic info even if metadata fetch fails
+                    return {
+                        url: doiResponse.data.trim(),
+                        created: new Date().toISOString(),
+                        registered: new Date().toISOString(),
+                        source: 'mds',
+                    };
+                }
+            }
+        } catch (error) {
+            if (error.response?.status === 404) {
+                logger.debug(`DOI ${doiValue} not found in DataCite MDS`);
+                return null;
+            }
+
+            logger.debug(`DataCite MDS API failed for ${doiValue}: ${error.message}`);
+        }
+
+        return null;
+    }
+
+    /**
+     * Checks if a DOI exists in DataCite
+     *
+     * @param doiValue The DOI identifier
+     * @returns Promise<boolean> True if DOI exists
+     */
+    public async doiExists(doiValue: string): Promise<boolean> {
+        const doiInfo = await this.getDoiInfo(doiValue);
+        return doiInfo !== null;
+    }
+
+    /**
+     * Gets the last modification date of a DOI
+     *
+     * @param doiValue The DOI identifier
+     * @returns Promise<Date | null> Last modification date or creation date if never updated, null if not found
+     */
+    public async getDoiLastModified(doiValue: string): Promise<Date | null> {
+        const doiInfo = await this.getDoiInfo(doiValue);
+
+        if (doiInfo) {
+            // Use updated date if available, otherwise fall back to created/registered date
+            const dateToUse = doiInfo.updated || doiInfo.registered || doiInfo.created;
+
+            if (dateToUse) {
+                logger.debug(
+                    `DOI ${doiValue}: Using ${doiInfo.updated ? 'updated' : doiInfo.registered ? 'registered' : 'created'} date: ${dateToUse}`,
+                );
+                return new Date(dateToUse);
+            }
+        }
+
+        return null;
+    }
+
+    /**
+     * Makes a DOI unfindable (registered but not discoverable)
+     * Note: DOIs cannot be deleted, only made unfindable
+     * await doiClient.makeDoiUnfindable('10.21388/tethys.231');
+     *
+     * @param doiValue The DOI identifier e.g. '10.5072/tethys.999'
+     * @returns Promise<AxiosResponse<any>> The http response
+     */
+    public async makeDoiUnfindable(doiValue: string): Promise<AxiosResponse<any>> {
+        const auth = {
+            username: this.username,
+            password: this.password,
+        };
+
+        try {
+            // First, check if DOI exists
+            const exists = await this.doiExists(doiValue);
+            if (!exists) {
+                throw new DoiClientException(404, `DOI ${doiValue} not found`);
+            }
+
+            // Delete the DOI URL mapping to make it unfindable
+            // This removes the URL but keeps the metadata registered
+            const response = await axios.delete(`${this.serviceUrl}/doi/${doiValue}`, { auth });
+
+            // Response Codes for DELETE /doi/{doi}
+            // 200 OK: operation successful
+            // 401 Unauthorized: no login
+            // 403 Forbidden: login problem, quota exceeded
+            // 404 Not Found: DOI does not exist
+            if (response.status !== 200) {
+                const message = `Unexpected DataCite MDS response code ${response.status}`;
+                logger.error(message);
+                throw new DoiClientException(response.status, message);
+            }
+
+            logger.info(`DOI ${doiValue} successfully made unfindable`);
+            return response;
+        } catch (error) {
+            logger.error(`Failed to make DOI ${doiValue} unfindable: ${error.message}`);
+            if (error instanceof DoiClientException) {
+                throw error;
+            }
+            throw new DoiClientException(error.response?.status || 500, error.response?.data || error.message);
+        }
+    }
+
+    /**
+     * Makes a DOI findable again by re-registering the URL
+     * await doiClient.makeDoiFindable(
+     *     '10.21388/tethys.231',
+     *     'https://doi.dev.tethys.at/10.21388/tethys.231'
+     * );
+     *
+     * @param doiValue The DOI identifier e.g. '10.5072/tethys.999'
+     * @param landingPageUrl The landing page URL
+     * @returns Promise<AxiosResponse<any>> The http response
+     */
+    public async makeDoiFindable(doiValue: string, landingPageUrl: string): Promise<AxiosResponse<any>> {
+        const auth = {
+            username: this.username,
+            password: this.password,
+        };
+
+        try {
+            // Re-register the DOI with its URL to make it findable again
+            const response = await axios.put(`${this.serviceUrl}/doi/${doiValue}`, `doi=${doiValue}\nurl=${landingPageUrl}`, { auth });
+
+            // Response Codes for PUT /doi/{doi}
+            // 201 Created: operation successful
+            // 400 Bad Request: request body must be exactly two lines: DOI and URL
+            // 401 Unauthorized: no login
+            // 403 Forbidden: login problem, quota exceeded
+            // 412 Precondition failed: metadata must be uploaded first
+            if (response.status !== 201) {
+                const message = `Unexpected DataCite MDS response code ${response.status}`;
+                logger.error(message);
+                throw new DoiClientException(response.status, message);
+            }
+
+            logger.info(`DOI ${doiValue} successfully made findable again`);
+            return response;
+        } catch (error) {
+            logger.error(`Failed to make DOI ${doiValue} findable: ${error.message}`);
+            if (error instanceof DoiClientException) {
+                throw error;
+            }
+            throw new DoiClientException(error.response?.status || 500, error.response?.data || error.message);
+        }
+    }
+
+    /**
+     * Gets the current state of a DOI (draft, registered, findable)
+     * const state = await doiClient.getDoiState('10.21388/tethys.231');
+     * console.log(`Current state: ${state}`); // 'findable'
+     *
+     * @param doiValue The DOI identifier
+     * @returns Promise<string | null> The DOI state or null if not found
+     */
+    public async getDoiState(doiValue: string): Promise<string | null> {
+        const doiInfo = await this.getDoiInfo(doiValue);
+        return doiInfo?.state || null;
+    }
 }

app/Library/Utils/Index.ts

@@ -2,7 +2,7 @@ import Dataset from '#models/dataset';
 import { Client } from '@opensearch-project/opensearch';
 import { create } from 'xmlbuilder2';
 import SaxonJS from 'saxon-js';
-import XmlModel from '#app/Library/XmlModel';
+import DatasetXmlSerializer from '#app/Library/DatasetXmlSerializer';
 import { XMLBuilder } from 'xmlbuilder2/lib/interfaces.js';
 import logger from '@adonisjs/core/services/logger';
 import { readFileSync } from 'fs';
@@ -72,31 +72,42 @@ export default {
         }
     },
 
+    /**
+     * Index a dataset document to OpenSearch/Elasticsearch
+     */
     async indexDocument(dataset: Dataset, index_name: string): Promise<void> {
         try {
-            const proc = readFileSync('public/assets2/solr.sef.json');
+            // Load XSLT transformation file
-            const doc: string = await this.getTransformedString(dataset, proc);
+            const xsltProc = readFileSync('public/assets2/solr.sef.json');
 
-            let document = JSON.parse(doc);
+            // Transform dataset to JSON document
+            const jsonDoc: string = await this.getTransformedString(dataset, xsltProc);
+
+            const document = JSON.parse(jsonDoc);
+
+            // Index document to OpenSearch with doument json body
             await this.client.index({
                 id: dataset.publish_id?.toString(),
                 index: index_name,
                 body: document,
-                refresh: true,
+                refresh: true, // make immediately searchable
             });
-            logger.info(`dataset with publish_id ${dataset.publish_id} successfully indexed`);
+            logger.info(`Dataset ${dataset.publish_id} successfully indexed to ${index_name}`);
         } catch (error) {
-            logger.error(`An error occurred while indexing datsaet with publish_id ${dataset.publish_id}.`);
+            logger.error(`Failed to index dataset ${dataset.publish_id}: ${error.message}`);
+            throw error; // Re-throw to allow caller to handle
         }
     },
 
+    /**
+     * Transform dataset XML to JSON using XSLT
+     */
     async getTransformedString(dataset: Dataset, proc: Buffer): Promise<string> {
-        let xml = create({ version: '1.0', encoding: 'UTF-8', standalone: true }, '<root></root>');
+        // Generate XML string from dataset
-        const datasetNode = xml.root().ele('Dataset');
+        const xmlString = await this.generateDatasetXml(dataset);
-        await createXmlRecord(dataset, datasetNode);
-        const xmlString = xml.end({ prettyPrint: false });
 
         try {
+            // Apply XSLT transformation
             const result = await SaxonJS.transform({
                 stylesheetText: proc,
                 destination: 'serialized',
@@ -108,6 +119,18 @@ export default {
             return '';
         }
     },
+
+    /**
+     * Generate XML string from dataset model
+     */
+    async generateDatasetXml(dataset: Dataset): Promise<string> {
+        const xml = create({ version: '1.0', encoding: 'UTF-8', standalone: true }, '<root></root>');
+        const datasetNode = xml.root().ele('Dataset');
+
+        await createXmlRecord(dataset, datasetNode);
+
+        return xml.end({ prettyPrint: false });
+    },
 };
 /**
  * Return the default global focus trap stack
@@ -115,74 +138,49 @@ export default {
  * @return {import('focus-trap').FocusTrap[]}
  */
 
-// export const indexDocument = async (dataset: Dataset, index_name: string, proc: Buffer): Promise<void> => {
+/**
-//     try {
+ * Create complete XML record for dataset
-//         const doc = await getJsonString(dataset, proc);
+ * Handles caching and metadata enrichment
-
+ */
-//         let document = JSON.parse(doc);
-//         await client.index({
-//             id: dataset.publish_id?.toString(),
-//             index: index_name,
-//             body: document,
-//             refresh: true,
-//         });
-//         Logger.info(`dataset with publish_id ${dataset.publish_id} successfully indexed`);
-//     } catch (error) {
-//         Logger.error(`An error occurred while indexing datsaet with publish_id ${dataset.publish_id}.`);
-//     }
-// };
-
-// const getJsonString = async (dataset, proc): Promise<string> => {
-//     let xml = create({ version: '1.0', encoding: 'UTF-8', standalone: true }, '<root></root>');
-//     const datasetNode = xml.root().ele('Dataset');
-//     await createXmlRecord(dataset, datasetNode);
-//     const xmlString = xml.end({ prettyPrint: false });
-
-//     try {
-//         const result = await transform({
-//             stylesheetText: proc,
-//             destination: 'serialized',
-//             sourceText: xmlString,
-//         });
-//         return result.principalResult;
-//     } catch (error) {
-//         Logger.error(`An error occurred while creating the user, error: ${error.message},`);
-//         return '';
-//     }
-// };
-
 const createXmlRecord = async (dataset: Dataset, datasetNode: XMLBuilder): Promise<void> => {
     const domNode = await getDatasetXmlDomNode(dataset);
-    if (domNode) {
-         // add frontdoor url and data-type
-        dataset.publish_id && addLandingPageAttribute(domNode, dataset.publish_id.toString());
-        addSpecInformation(domNode, 'data-type:' + dataset.type);
-        if (dataset.collections) {
-            for (const coll of dataset.collections) {
-                const collRole = coll.collectionRole;
-                addSpecInformation(domNode, collRole.oai_name + ':' + coll.number);
-            }
-        }
 
-        datasetNode.import(domNode);
+    if (!domNode) {
+        throw new Error(`Failed to generate XML DOM node for dataset ${dataset.id}`);
     }
+
+    // Enrich with landing page URL
+    if (dataset.publish_id) {
+        addLandingPageAttribute(domNode, dataset.publish_id.toString());
+    }
+
+    // Add data type specification
+    addSpecInformation(domNode, `data-type:${dataset.type}`);
+
+    // Add collection information
+    if (dataset.collections) {
+        for (const coll of dataset.collections) {
+            const collRole = coll.collectionRole;
+            addSpecInformation(domNode, `${collRole.oai_name}:${coll.number}`);
+        }
+    }
+
+    datasetNode.import(domNode);
 };
 
 const getDatasetXmlDomNode = async (dataset: Dataset): Promise<XMLBuilder | null> => {
-    const xmlModel = new XmlModel(dataset);
+    const serializer = new DatasetXmlSerializer(dataset).enableCaching().excludeEmptyFields();
     // xmlModel.setModel(dataset);
-    xmlModel.excludeEmptyFields();
+
-    xmlModel.caching = true;
+    // Load cache relationship if not already loaded
-    // const cache = dataset.xmlCache ? dataset.xmlCache : null;
-    // dataset.load('xmlCache');
     await dataset.load('xmlCache');
     if (dataset.xmlCache) {
-        xmlModel.xmlCache = dataset.xmlCache;
+        serializer.setCache(dataset.xmlCache);
     }
 
-    // return cache.getDomDocument();
+    // Generate or retrieve cached DOM document
-    const domDocument: XMLBuilder | null = await xmlModel.getDomDocument();
+    const xmlDocument: XMLBuilder | null = await serializer.toXmlDocument();
-    return domDocument;
+    return xmlDocument;
 };
 
 const addLandingPageAttribute = (domNode: XMLBuilder, dataid: string) => {
@@ -192,6 +190,6 @@ const addLandingPageAttribute = (domNode: XMLBuilder, dataid: string) => {
     domNode.att('landingpage', url);
 };
 
-const addSpecInformation= (domNode: XMLBuilder, information: string) => {
+const addSpecInformation = (domNode: XMLBuilder, information: string) => {
     domNode.ele('SetSpec').att('Value', information);
 };

app/Library/XmlModel.ts

@@ -1,129 +0,0 @@
-import DocumentXmlCache from '#models/DocumentXmlCache';
-import { XMLBuilder } from 'xmlbuilder2/lib/interfaces.js';
-import Dataset from '#models/dataset';
-import Strategy from './Strategy.js';
-import { DateTime } from 'luxon';
-import { builder } from 'xmlbuilder2';
-
-/**
- * This is the description of the interface
- *
- * @interface Conf
- * @member {Model} model holds the current dataset model
- * @member {XMLBuilder} dom holds the current DOM representation
- * @member {Array<string>} excludeFields List of fields to skip on serialization.
- * @member {boolean} excludeEmpty True, if empty fields get excluded from serialization.
- * @member {string} baseUri Base URI for xlink:ref elements
- */
-export interface Conf {
-    model: Dataset;
-    dom?: XMLBuilder;
-    excludeFields: Array<string>;
-    excludeEmpty: boolean;
-    baseUri: string;
-}
-
-export default class XmlModel {
-    private config: Conf;
-    // private strategy = null;
-    private cache: DocumentXmlCache | null = null;
-    private _caching = false;
-    private strategy: Strategy;
-
-    constructor(dataset: Dataset) {
-        // $this->strategy = new Strategy();// Opus_Model_Xml_Version1;
-        // $this->config = new Conf();
-        // $this->strategy->setup($this->config);
-
-        this.config = {
-            excludeEmpty: false,
-            baseUri: '',
-            excludeFields: [],
-            model: dataset,
-        };
-
-        this.strategy = new Strategy({
-            excludeEmpty: true,
-            baseUri: '',
-            excludeFields: [],
-            model: dataset,
-        });
-    }
-
-    set model(model: Dataset) {
-        this.config.model = model;
-    }
-
-    public excludeEmptyFields(): void {
-        this.config.excludeEmpty = true;
-    }
-
-    get xmlCache(): DocumentXmlCache | null {
-        return this.cache;
-    }
-
-    set xmlCache(cache: DocumentXmlCache) {
-        this.cache = cache;
-    }
-
-    get caching(): boolean {
-        return this._caching;
-    }
-    set caching(caching: boolean) {
-        this._caching = caching;
-    }
-
-    public async getDomDocument(): Promise<XMLBuilder | null> {
-        const dataset = this.config.model;
-
-        let domDocument: XMLBuilder | null = await this.getDomDocumentFromXmlCache();
-        if (domDocument == null) {
-            domDocument = await this.strategy.createDomDocument();
-            //     domDocument = create({ version: '1.0', encoding: 'UTF-8', standalone: true }, '<root></root>');
-            if (this._caching) {
-                // caching is desired:
-                this.cache = this.cache || new DocumentXmlCache();
-                this.cache.document_id = dataset.id;
-                this.cache.xml_version = 1; // (int)$this->strategy->getVersion();
-                this.cache.server_date_modified = dataset.server_date_modified.toFormat('yyyy-MM-dd HH:mm:ss');
-                this.cache.xml_data = domDocument.end();
-                await this.cache.save();
-            }
-            const node = domDocument.find(
-                (n) => {
-                    const test = n.node.nodeName == 'Rdr_Dataset';
-                    return test;
-                },
-                false,
-                true,
-            )?.node;
-            if (node != undefined) {
-                domDocument = builder({ version: '1.0', encoding: 'UTF-8', standalone: true }, node);
-            }
-        }
-        return domDocument;
-    }
-
-    private async getDomDocumentFromXmlCache(): Promise<XMLBuilder | null> {
-        const dataset: Dataset = this.config.model;
-        if (!this.cache) {
-            return null;
-        }
-        //.toFormat('YYYY-MM-DD HH:mm:ss');
-        let date: DateTime = dataset.server_date_modified;
-        const actuallyCached: boolean = await DocumentXmlCache.hasValidEntry(dataset.id, date);
-        if (!actuallyCached) {
-            return null;
-        }
-        //cache is actual return it for oai:
-        try {
-            if (this.cache) {
-                return this.cache.getDomDocument();
-            } else {
-                return null;
-            }
-        } catch (error) {
-            return null;
-        }
-    }
-}

app/controllers/projects_controller.ts

@@ -0,0 +1,54 @@
+// app/controllers/projects_controller.ts
+import Project from '#models/project';
+import type { HttpContext } from '@adonisjs/core/http';
+import { createProjectValidator, updateProjectValidator } from '#validators/project';
+
+export default class ProjectsController {
+    // GET /settings/projects
+    public async index({ inertia, auth }: HttpContext) {
+        const projects = await Project.all();
+        // return inertia.render('Admin/Project/Index', { projects });
+        return inertia.render('Admin/Project/Index', {
+            projects: projects,
+            can: {
+                edit: await auth.user?.can(['settings']),
+                create: await auth.user?.can(['settings']),
+            },
+        });
+    }
+
+    // GET /settings/projects/create
+    public async create({ inertia }: HttpContext) {
+        return inertia.render('Admin/Project/Create');
+    }
+
+    // POST /settings/projects
+    public async store({ request, response, session }: HttpContext) {
+        // Validate the request data
+        const data = await request.validateUsing(createProjectValidator);
+
+        await Project.create(data);
+
+        session.flash('success', 'Project created successfully');
+        return response.redirect().toRoute('settings.project.index');
+    }
+
+    // GET /settings/projects/:id/edit
+    public async edit({ params, inertia }: HttpContext) {
+        const project = await Project.findOrFail(params.id);
+        return inertia.render('Admin/Project/Edit', { project });
+    }
+
+    // PUT /settings/projects/:id
+    public async update({ params, request, response, session }: HttpContext) {
+        const project = await Project.findOrFail(params.id);
+        
+        // Validate the request data
+        const data = await request.validateUsing(updateProjectValidator);
+
+        await project.merge(data).save();
+
+        session.flash('success', 'Project updated successfully');
+        return response.redirect().toRoute('settings.project.index');
+    }
+}

app/models/DocumentXmlCache.ts

@@ -4,7 +4,8 @@ import { builder, create } from 'xmlbuilder2';
 import { XMLBuilder } from 'xmlbuilder2/lib/interfaces.js';
 import db from '@adonisjs/lucid/services/db';
 import { DateTime } from 'luxon';
-import type { BelongsTo } from "@adonisjs/lucid/types/relations";
+import type { BelongsTo } from '@adonisjs/lucid/types/relations';
+import logger from '@adonisjs/core/services/logger';
 
 export default class DocumentXmlCache extends BaseModel {
     public static namingStrategy = new SnakeCaseNamingStrategy();
@@ -66,33 +67,38 @@ export default class DocumentXmlCache extends BaseModel {
     }
 
     /**
-     * Check if a dataset in a specific xml version is already cached or not.
+     * Check if a valid (non-stale) cache entry exists
+     * Cache is valid only if it was created AFTER the dataset's last modification
      *
-     * @param mixed datasetId
+     * @param datasetId - The dataset ID to check
-     * @param mixed serverDateModified
+     * @param datasetServerDateModified - The dataset's last modification timestamp
-     * @returns {Promise<boolean>} Returns true on cached hit else false.
+     * @returns true if valid cache exists, false otherwise
      */
-    // public static async hasValidEntry(datasetId: number, datasetServerDateModified: DateTime): Promise<boolean> {
-    //     // const formattedDate = dayjs(datasetServerDateModified).format('YYYY-MM-DD HH:mm:ss');
-
-    //     const query = Database.from(this.table)
-    //         .where('document_id', datasetId)
-    //         .where('server_date_modified', '2023-08-17 16:51:03')
-    //         .first();
-
-    //     const row = await query;
-    //     return !!row;
-    // }
-
-    // Assuming 'DocumentXmlCache' has a table with a 'server_date_modified' column in your database
     public static async hasValidEntry(datasetId: number, datasetServerDateModified: DateTime): Promise<boolean> {
         const serverDateModifiedString: string = datasetServerDateModified.toFormat('yyyy-MM-dd HH:mm:ss'); // Convert DateTime to ISO string
-        const query = db.from(this.table)
+
+        const row = await db
+            .from(this.table)
             .where('document_id', datasetId)
-            .where('server_date_modified', '>=', serverDateModifiedString) // Check if server_date_modified is newer or equal
+            .where('server_date_modified', '>', serverDateModifiedString) // Check if server_date_modified is newer or equal
             .first();
 
-        const row = await query;
+        const isValid = !!row;
-        return !!row;
+
+        if (isValid) {
+            logger.debug(`Valid cache found for dataset ${datasetId}`);
+        } else {
+            logger.debug(`No valid cache for dataset ${datasetId} (dataset modified: ${serverDateModifiedString})`);
+        }
+
+        return isValid;
+    }
+
+    /**
+     * Invalidate (delete) cache entry
+     */
+    public async invalidate(): Promise<void> {
+        await this.delete();
+        logger.debug(`Invalidated cache for document ${this.document_id}`);
     }
 }

app/models/person.ts

@@ -30,7 +30,7 @@ export default class Person extends BaseModel {
     @column({})
     public lastName: string;
 
-    @column({})
+    @column({ columnName: 'identifier_orcid' })
     public identifierOrcid: string;
 
     @column({})
@@ -95,4 +95,34 @@ export default class Person extends BaseModel {
         pivotColumns: ['role', 'sort_order', 'allow_email_contact'],
     })
     public datasets: ManyToMany<typeof Dataset>;
+
+    // public toJSON() {
+    //     const json = super.toJSON();
+
+    //     // Check if this person is loaded through a pivot relationship with sensitive roles
+    //     const pivotRole = this.$extras?.pivot_role;
+    //     if (pivotRole === 'author' || pivotRole === 'contributor') {
+    //         // Remove sensitive information for public-facing roles
+    //         delete json.email;
+    //         // delete json.identifierOrcid;
+    //     }
+
+    //     return json;
+    // }
+
+    //  @afterFind()
+    // public static async afterFindHook(person: Person) {
+    //     if (person.$extras?.pivot_role === 'author' || person.$extras?.pivot_role === 'contributor') {
+    //         person.email = undefined as any;
+    //     }
+    // }
+
+    // @afterFetch()
+    // public static async afterFetchHook(persons: Person[]) {
+    //     persons.forEach(person => {
+    //         if (person.$extras?.pivot_role === 'author' || person.$extras?.pivot_role === 'contributor') {
+    //             person.email = undefined as any;
+    //         }
+    //     });
+    // }
 }

app/models/user.ts

@@ -89,24 +89,11 @@ export default class User extends compose(BaseModel, AuthFinder) {
     @column({})
     public avatar: string;
 
-    // @hasOne(() => TotpSecret, {
-    //     foreignKey: 'user_id',
-    // })
-    // public totp_secret: HasOne<typeof TotpSecret>;
-
-    // @beforeSave()
-    // public static async hashPassword(user: User) {
-    //     if (user.$dirty.password) {
-    //         user.password = await hash.use('laravel').make(user.password);
-    //     }
-    // }
-
     public get isTwoFactorEnabled(): boolean {
         return Boolean(this?.twoFactorSecret && this.state == TotpState.STATE_ENABLED);
         // return Boolean(this.totp_secret?.twoFactorSecret);
     }
 
-  
     @manyToMany(() => Role, {
         pivotForeignKey: 'account_id',
         pivotRelatedForeignKey: 'role_id',
@@ -142,7 +129,9 @@ export default class User extends compose(BaseModel, AuthFinder) {
     @beforeFind()
     @beforeFetch()
     public static preloadRoles(user: User) {
-      user.preload('roles')
+        user.preload('roles', (builder) => {
+            builder.select(['id', 'name', 'display_name', 'description']);
+        });
     }
 
     public async getBackupCodes(this: User): Promise<BackupCode[]> {

app/validators/dataset.ts

@@ -55,8 +55,8 @@ export const createDatasetValidator = vine.compile(
                         .translatedLanguage({ mainLanguageField: 'language', typeField: 'type' }),
                 }),
             )
-           // .minLength(1),
+            // .minLength(1),
-           .arrayContainsTypes({ typeA: 'abstract', typeB: 'translated' }),
+            .arrayContainsTypes({ typeA: 'abstract', typeB: 'translated' }),
         authors: vine
             .array(
                 vine.object({
@@ -67,8 +67,9 @@ export const createDatasetValidator = vine.compile(
                         .email()
                         .normalizeEmail()
                         .isUniquePerson({ table: 'persons', column: 'email', idField: 'id' }),
-                    first_name: vine.string().trim().minLength(3).maxLength(255),
+                    first_name: vine.string().trim().minLength(3).maxLength(255).optional().requiredWhen('name_type', '=', 'Personal'),
                     last_name: vine.string().trim().minLength(3).maxLength(255),
+                    identifier_orcid: vine.string().trim().maxLength(255).orcid().optional(),
                 }),
             )
             .minLength(1)
@@ -83,9 +84,10 @@ export const createDatasetValidator = vine.compile(
                         .email()
                         .normalizeEmail()
                         .isUniquePerson({ table: 'persons', column: 'email', idField: 'id' }),
-                    first_name: vine.string().trim().minLength(3).maxLength(255),
+                    first_name: vine.string().trim().minLength(3).maxLength(255).optional().requiredWhen('name_type', '=', 'Personal'),
                     last_name: vine.string().trim().minLength(3).maxLength(255),
                     pivot_contributor_type: vine.enum(Object.keys(ContributorTypes)),
+                    identifier_orcid: vine.string().trim().maxLength(255).orcid().optional(),
                 }),
             )
             .distinct('email')
@@ -158,7 +160,8 @@ export const createDatasetValidator = vine.compile(
                     .fileScan({ removeInfected: true }),
             )
             .minLength(1),
-    }),);
+    }),
+);
 
 /**
  * Validates the dataset's update action
@@ -214,8 +217,9 @@ export const updateDatasetValidator = vine.compile(
                         .email()
                         .normalizeEmail()
                         .isUniquePerson({ table: 'persons', column: 'email', idField: 'id' }),
-                    first_name: vine.string().trim().minLength(3).maxLength(255),
+                    first_name: vine.string().trim().minLength(3).maxLength(255).optional().requiredWhen('name_type', '=', 'Personal'),
                     last_name: vine.string().trim().minLength(3).maxLength(255),
+                    identifier_orcid: vine.string().trim().maxLength(255).orcid().optional(),
                 }),
             )
             .minLength(1)
@@ -230,8 +234,9 @@ export const updateDatasetValidator = vine.compile(
                         .email()
                         .normalizeEmail()
                         .isUniquePerson({ table: 'persons', column: 'email', idField: 'id' }),
-                    first_name: vine.string().trim().minLength(3).maxLength(255),
+                    first_name: vine.string().trim().minLength(3).maxLength(255).optional().requiredWhen('name_type', '=', 'Personal'),
                     last_name: vine.string().trim().minLength(3).maxLength(255),
+                    identifier_orcid: vine.string().trim().maxLength(255).orcid().optional(),
                     pivot_contributor_type: vine.enum(Object.keys(ContributorTypes)),
                 }),
             )
@@ -305,12 +310,13 @@ export const updateDatasetValidator = vine.compile(
                     .fileScan({ removeInfected: true }),
             )
             .dependentArrayMinLength({ dependentArray: 'fileInputs', min: 1 }),
-        fileInputs: vine.array(
+        fileInputs: vine
-            vine.object({
+            .array(
-                label: vine.string().trim().maxLength(100),
+                vine.object({
-                //extnames: extensions,
+                    label: vine.string().trim().maxLength(100),
-            }),
+                }),
-        ),
+            )
+            .optional(),
     }),
 );
 
@@ -365,8 +371,9 @@ export const updateEditorDatasetValidator = vine.compile(
                         .email()
                         .normalizeEmail()
                         .isUniquePerson({ table: 'persons', column: 'email', idField: 'id' }),
-                    first_name: vine.string().trim().minLength(3).maxLength(255),
+                    first_name: vine.string().trim().minLength(3).maxLength(255).optional().requiredWhen('name_type', '=', 'Personal'),
                     last_name: vine.string().trim().minLength(3).maxLength(255),
+                    identifier_orcid: vine.string().trim().maxLength(255).orcid().optional(),
                 }),
             )
             .minLength(1)
@@ -381,8 +388,9 @@ export const updateEditorDatasetValidator = vine.compile(
                         .email()
                         .normalizeEmail()
                         .isUniquePerson({ table: 'persons', column: 'email', idField: 'id' }),
-                    first_name: vine.string().trim().minLength(3).maxLength(255),
+                    first_name: vine.string().trim().minLength(3).maxLength(255).optional().requiredWhen('name_type', '=', 'Personal'),
                     last_name: vine.string().trim().minLength(3).maxLength(255),
+                    identifier_orcid: vine.string().trim().maxLength(255).orcid().optional(),
                     pivot_contributor_type: vine.enum(Object.keys(ContributorTypes)),
                 }),
             )
@@ -496,7 +504,7 @@ let messagesProvider = new SimpleMessagesProvider({
     'files.array.minLength': 'At least {{ min }}  file upload is required.',
     'files.*.size': 'file size is to big',
     'files.*.extnames': 'file extension is not supported',
-     'embargo_date.date.afterOrEqual': `Embargo date must be on or after ${dayjs().add(10, 'day').format('DD.MM.YYYY')}`,
+    'embargo_date.date.afterOrEqual': `Embargo date must be on or after ${dayjs().add(10, 'day').format('DD.MM.YYYY')}`,
 });
 
 createDatasetValidator.messagesProvider = messagesProvider;

app/validators/project.ts

@@ -0,0 +1,28 @@
+// app/validators/project.ts
+import vine from '@vinejs/vine';
+
+export const createProjectValidator = vine.compile(
+    vine.object({
+        label: vine.string().trim().minLength(1).maxLength(50) .regex(/^[a-z0-9-]+$/),
+        name: vine
+            .string()
+            .trim()
+            .minLength(3)
+            .maxLength(255)
+            .regex(/^[a-zA-Z0-9äöüßÄÖÜ\s-]+$/),
+        description: vine.string().trim().maxLength(255).minLength(5).optional(),
+    }),
+);
+
+export const updateProjectValidator = vine.compile(
+    vine.object({
+        // label is NOT included since it's readonly
+        name: vine
+            .string()
+            .trim()
+            .minLength(3)
+            .maxLength(255)
+            .regex(/^[a-zA-Z0-9äöüßÄÖÜ\s-]+$/),
+         description: vine.string().trim().maxLength(255).minLength(5).optional(),
+    }),
+);

app/validators/role.ts

@@ -8,20 +8,20 @@ export const createRoleValidator = vine.compile(
     vine.object({
         name: vine
             .string()
-            .isUnique({ table: 'roles', column: 'name' })
             .trim()
             .minLength(3)
             .maxLength(255)
-            .regex(/^[a-zA-Z0-9]+$/), //Must be alphanumeric with hyphens or underscores
+            .isUnique({ table: 'roles', column: 'name' })
+            .regex(/^[a-zA-Z0-9]+$/), // Must be alphanumeric
         display_name: vine
             .string()
-            .isUnique({ table: 'roles', column: 'display_name' })
             .trim()
             .minLength(3)
             .maxLength(255)
+            .isUnique({ table: 'roles', column: 'display_name' })
             .regex(/^[a-zA-Z0-9]+$/),
         description: vine.string().trim().escape().minLength(3).maxLength(255).optional(),
-        permissions: vine.array(vine.number()).minLength(1), // define at least one permission for the new role
+        permissions: vine.array(vine.number()).minLength(1), // At least one permission required
     }),
 );
 
@@ -29,21 +29,28 @@ export const updateRoleValidator = vine.withMetaData<{ roleId: number }>().compi
     vine.object({
         name: vine
             .string()
-            // .unique(async (db, value, field) => {
+            .trim()
-            //     const result = await db.from('roles').select('id').whereNot('id', field.meta.roleId).where('name', value).first();
+            .minLength(3)
-            //     return result.length ? false : true;
+            .maxLength(255)
-            // })
             .isUnique({
                 table: 'roles',
                 column: 'name',
                 whereNot: (field) => field.meta.roleId,
             })
+            .regex(/^[a-zA-Z0-9]+$/),
+        display_name: vine
+            .string()
             .trim()
             .minLength(3)
-            .maxLength(255),
+            .maxLength(255)
-
+            .isUnique({
+                table: 'roles',
+                column: 'display_name',
+                whereNot: (field) => field.meta.roleId,
+            })
+            .regex(/^[a-zA-Z0-9]+$/),
         description: vine.string().trim().escape().minLength(3).maxLength(255).optional(),
-        permissions: vine.array(vine.number()).minLength(1), // define at least one permission for the new role
+        permissions: vine.array(vine.number()).minLength(1), // At least one permission required
     }),
 );
 

clamd.conf

@@ -5,7 +5,23 @@ LogSyslog no
 LogVerbose yes
 DatabaseDirectory /var/lib/clamav
 LocalSocket /var/run/clamav/clamd.socket
+# LocalSocketMode 666
+# Optional: allow multiple threads
+MaxThreads 20
+# Disable TCP socket
+# TCPSocket 0
+
+# TCP port address.
+# Default: no
+# TCPSocket 3310
+# TCP address.
+# By default we bind to INADDR_ANY, probably not wise.
+# Enable the following to provide some degree of protection
+# from the outside world.
+# Default: no
+# TCPAddr 127.0.0.1
+ 
 Foreground no
 PidFile /var/run/clamav/clamd.pid
-LocalSocketGroup node
+# LocalSocketGroup node  # Changed from 'clamav'
-User node
+# User node              # Changed from 'clamav' - clamd runs as clamav user

commands/fix_dataset_cross_references.ts

@@ -0,0 +1,482 @@
+/*
+|--------------------------------------------------------------------------
+| node ace make:command fix-dataset-cross-references
+| DONE:    create commands/fix_dataset_cross_references.ts
+|--------------------------------------------------------------------------
+*/
+import { BaseCommand, flags } from '@adonisjs/core/ace';
+import type { CommandOptions } from '@adonisjs/core/types/ace';
+import { DateTime } from 'luxon';
+import Dataset from '#models/dataset';
+import DatasetReference from '#models/dataset_reference';
+import AppConfig from '#models/appconfig';
+// import env from '#start/env';
+
+interface MissingCrossReference {
+    sourceDatasetId: number;
+    targetDatasetId: number;
+    sourcePublishId: number | null;
+    targetPublishId: number | null;
+    sourceDoi: string | null;
+    targetDoi: string | null;
+    referenceType: string;
+    relation: string;
+    doi: string | null;
+    reverseRelation: string;
+    sourceReferenceLabel: string | null;
+}
+
+export default class DetectMissingCrossReferences extends BaseCommand {
+    static commandName = 'detect:missing-cross-references';
+    static description = 'Detect missing bidirectional cross-references between versioned datasets';
+
+    public static needsApplication = true;
+
+    @flags.boolean({ alias: 'f', description: 'Fix missing cross-references automatically' })
+    public fix: boolean = false;
+
+    @flags.boolean({ alias: 'v', description: 'Verbose output' })
+    public verbose: boolean = false;
+
+    @flags.number({ alias: 'p', description: 'Filter by specific publish_id (source or target dataset)' })
+    public publish_id?: number;
+
+    // example: node ace detect:missing-cross-references --verbose -p 227 //if you want to filter by specific publish_id with details
+    // example: node ace detect:missing-cross-references --verbose
+    // example: node ace detect:missing-cross-references --fix -p 227 //if you want to filter by specific publish_id and fix it
+    // example: node ace detect:missing-cross-references
+
+    public static options: CommandOptions = {
+        startApp: true,
+        staysAlive: false,
+    };
+
+    // Define the allowed relations that we want to process
+    private readonly ALLOWED_RELATIONS = [
+        'IsNewVersionOf',
+        'IsPreviousVersionOf',
+        'IsVariantFormOf',
+        'IsOriginalFormOf',
+        'Continues',
+        'IsContinuedBy',
+        'HasPart',
+        'IsPartOf',
+    ];
+    // private readonly ALLOWED_RELATIONS = ['IsPreviousVersionOf', 'IsOriginalFormOf'];
+
+    async run() {
+        this.logger.info('🔍 Detecting missing cross-references...');
+        this.logger.info(`📋 Processing only these relations: ${this.ALLOWED_RELATIONS.join(', ')}`);
+
+        if (this.publish_id) {
+            this.logger.info(`Filtering by publish_id: ${this.publish_id}`);
+        }
+
+        try {
+            const missingReferences = await this.findMissingCrossReferences();
+
+            // Store count in AppConfig if not fixing and count >= 1
+            if (!this.fix && missingReferences.length >= 1) {
+                await this.storeMissingCrossReferencesCount(missingReferences.length);
+            }
+
+            if (missingReferences.length === 0) {
+                const filterMsg = this.publish_id ? ` for publish_id ${this.publish_id}` : '';
+                this.logger.success(`All cross-references are properly linked for the specified relations${filterMsg}!`);
+                // Clear the count if no missing references
+                if (!this.fix) {
+                    await this.storeMissingCrossReferencesCount(0);
+                }
+                return;
+            }
+
+            const filterMsg = this.publish_id ? ` (filtered by publish_id ${this.publish_id})` : '';
+            this.logger.warning(`Found ${missingReferences.length} missing cross-reference(s)${filterMsg}:`);
+
+            // Show brief list if not verbose mode
+            if (!this.verbose) {
+                for (const missing of missingReferences) {
+                    const sourceDoi = missing.sourceDoi ? ` DOI: ${missing.sourceDoi}` : '';
+                    const targetDoi = missing.targetDoi ? ` DOI: ${missing.targetDoi}` : '';
+
+                    this.logger.info(
+                        `Dataset ${missing.sourceDatasetId} (Publish ID: ${missing.sourcePublishId}${sourceDoi}) ${missing.relation} Dataset ${missing.targetDatasetId} (Publish ID: ${missing.targetPublishId}${targetDoi}) → missing reverse: ${missing.reverseRelation}`,
+                    );
+                }
+            } else {
+                // Verbose mode - show detailed info
+                for (const missing of missingReferences) {
+                    this.logger.info(
+                        `Dataset ${missing.sourceDatasetId} references ${missing.targetDatasetId}, but reverse reference is missing`,
+                    );
+                    this.logger.info(`  - Reference type: ${missing.referenceType}`);
+                    this.logger.info(`  - Relation: ${missing.relation}`);
+                    this.logger.info(`  - DOI: ${missing.doi}`);
+                }
+            }
+
+            if (this.fix) {
+                await this.fixMissingReferences(missingReferences);
+                // Clear the count after fixing
+                await this.storeMissingCrossReferencesCount(0);
+                this.logger.success('All missing cross-references have been fixed!');
+            } else {
+                if (this.verbose) {
+                    this.printMissingReferencesList(missingReferences);
+                }
+                this.logger.info('💡 Run with --fix flag to automatically create missing cross-references');
+                if (this.publish_id) {
+                    this.logger.info(`🎯 Currently filtering by publish_id: ${this.publish_id}`);
+                }
+            }
+        } catch (error) {
+            this.logger.error('Error detecting missing cross-references:', error);
+            process.exit(1);
+        }
+    }
+
+    private async storeMissingCrossReferencesCount(count: number): Promise<void> {
+        try {
+            await AppConfig.updateOrCreate(
+                {
+                    appid: 'commands',
+                    configkey: 'missing_cross_references_count',
+                },
+                {
+                    configvalue: count.toString(),
+                },
+            );
+
+            this.logger.info(`📊 Stored missing cross-references count in database: ${count}`);
+        } catch (error) {
+            this.logger.error('Failed to store missing cross-references count:', error);
+        }
+    }
+
+    private async findMissingCrossReferences(): Promise<MissingCrossReference[]> {
+        const missingReferences: {
+            sourceDatasetId: number;
+            targetDatasetId: number;
+            sourcePublishId: number | null;
+            targetPublishId: number | null;
+            sourceDoi: string | null;
+            targetDoi: string | null;
+            referenceType: string;
+            relation: string;
+            doi: string | null;
+            reverseRelation: string;
+            sourceReferenceLabel: string | null;
+        }[] = [];
+
+        this.logger.info('📊 Querying dataset references...');
+
+        // Find all references that point to Tethys datasets (DOI or URL containing tethys DOI)
+        // Only from datasets that are published AND only for allowed relations
+        const tethysReferencesQuery = DatasetReference.query()
+            .whereIn('type', ['DOI', 'URL'])
+            .whereIn('relation', this.ALLOWED_RELATIONS) // Only process allowed relations
+            .where((query) => {
+                query.where('value', 'like', '%doi.org/10.24341/tethys.%').orWhere('value', 'like', '%tethys.at/dataset/%');
+            })
+            .preload('dataset', (datasetQuery) => {
+                datasetQuery.preload('identifier');
+            })
+            .whereHas('dataset', (datasetQuery) => {
+                datasetQuery.where('server_state', 'published');
+            });
+        if (typeof this.publish_id === 'number') {
+            tethysReferencesQuery.whereHas('dataset', (datasetQuery) => {
+                datasetQuery.where('publish_id', this.publish_id as number);
+            });
+        }
+
+        const tethysReferences = await tethysReferencesQuery.exec();
+
+        this.logger.info(`🔗 Found ${tethysReferences.length} Tethys references from published datasets (allowed relations only)`);
+
+        let processedCount = 0;
+        let skippedCount = 0;
+
+        for (const reference of tethysReferences) {
+            processedCount++;
+
+            // if (this.verbose && processedCount % 10 === 0) {
+            //     this.logger.info(`📈 Processed ${processedCount}/${tethysReferences.length} references...`);
+            // }
+
+            // Double-check that this relation is in our allowed list (safety check)
+            if (!this.ALLOWED_RELATIONS.includes(reference.relation)) {
+                skippedCount++;
+                if (this.verbose) {
+                    this.logger.info(`⏭️  Skipping relation "${reference.relation}" - not in allowed list`);
+                }
+                continue;
+            }
+
+            // Extract dataset publish_id from DOI or URL
+            // const targetDatasetPublish = this.extractDatasetPublishIdFromReference(reference.value);
+            // Extract DOI from reference URL
+            const doi = this.extractDoiFromReference(reference.value);
+
+            // if (!targetDatasetPublish) {
+            //     if (this.verbose) {
+            //         this.logger.warning(`Could not extract publish ID from: ${reference.value}`);
+            //     }
+            //     continue;
+            // }
+            if (!doi) {
+                if (this.verbose) {
+                    this.logger.warning(`Could not extract DOI from: ${reference.value}`);
+                }
+                continue;
+            }
+
+            // // Check if target dataset exists and is published
+            // const targetDataset = await Dataset.query()
+            //     .where('publish_id', targetDatasetPublish)
+            //     .where('server_state', 'published')
+            //     .preload('identifier')
+            //     .first();
+            // Check if target dataset exists and is published by querying via identifier
+            const targetDataset = await Dataset.query()
+                .where('server_state', 'published')
+                .whereHas('identifier', (query) => {
+                    query.where('value', doi);
+                })
+                .preload('identifier')
+                .first();
+
+            if (!targetDataset) {
+                if (this.verbose) {
+                    this.logger.warning(`⚠️  Target dataset with publish_id ${doi} not found or not published`);
+                }
+                continue;
+            }
+
+            // Ensure we have a valid source dataset with proper preloading
+            if (!reference.dataset) {
+                this.logger.warning(`⚠️  Source dataset ${reference.document_id} not properly loaded, skipping...`);
+                continue;
+            }
+
+            // Check if reverse reference exists
+            const reverseReferenceExists = await this.checkReverseReferenceExists(
+                targetDataset.id,
+                reference.document_id,
+                reference.relation,
+                reference.dataset.identifier.value
+            );
+
+            if (!reverseReferenceExists) {
+                const reverseRelation = this.getReverseRelation(reference.relation);
+                if (reverseRelation) {
+                    // Only add if we have a valid reverse relation
+                    missingReferences.push({
+                        sourceDatasetId: reference.document_id,
+                        targetDatasetId: targetDataset.id,
+                        sourcePublishId: reference.dataset.publish_id || null,
+                        targetPublishId: targetDataset.publish_id || null,
+                        referenceType: reference.type,
+                        relation: reference.relation,
+                        doi: reference.value,
+                        reverseRelation: reverseRelation,
+                        sourceDoi: reference.dataset.identifier ? reference.dataset.identifier.value : null,
+                        targetDoi: targetDataset.identifier ? targetDataset.identifier.value : null,
+                        sourceReferenceLabel: reference.label || null,
+                    });
+                }
+            }
+        }
+
+        this.logger.info(`✅ Processed ${processedCount} references (${skippedCount} skipped due to relation filtering)`);
+        return missingReferences;
+    }
+
+    private extractDoiFromReference(reference: string): string | null {
+        // Match DOI pattern, with or without URL prefix
+        const doiPattern = /(?:https?:\/\/)?(?:doi\.org\/)?(.+)/i;
+        const match = reference.match(doiPattern);
+
+        if (match && match[1]) {
+            return match[1]; // Returns just "10.24341/tethys.99.2"
+        }
+
+        return null;
+    }
+
+    private extractDatasetPublishIdFromReference(value: string): number | null {
+        // Extract from DOI: https://doi.org/10.24341/tethys.107 -> 107
+        const doiMatch = value.match(/10\.24341\/tethys\.(\d+)/);
+        if (doiMatch) {
+            return parseInt(doiMatch[1]);
+        }
+
+        // Extract from URL: https://tethys.at/dataset/107 -> 107
+        const urlMatch = value.match(/tethys\.at\/dataset\/(\d+)/);
+        if (urlMatch) {
+            return parseInt(urlMatch[1]);
+        }
+
+        return null;
+    }
+
+    private async checkReverseReferenceExists(
+        targetDatasetId: number,
+        sourceDatasetId: number,
+        originalRelation: string,
+        sourceDatasetIdentifier: string | null,
+    ): Promise<boolean> {
+        const reverseRelation = this.getReverseRelation(originalRelation);
+
+        if (!reverseRelation) {
+            return true; // If no reverse relation is defined, consider it as "exists" to skip processing
+        }
+
+        // Only check for reverse references where the source dataset is also published
+        const reverseReference = await DatasetReference.query()
+            // We don't filter by source document_id here to find any incoming reference from any published dataset
+            .where('document_id', targetDatasetId)
+            // .where('related_document_id', sourceDatasetId) // Ensure it's an incoming reference
+            .where('relation', reverseRelation)
+            .where('value', 'like', `%${sourceDatasetIdentifier}`) // Basic check to ensure it points back to source dataset
+            .first();
+
+        return !!reverseReference;
+    }
+
+    private getReverseRelation(relation: string): string | null {
+        const relationMap: Record<string, string> = {
+            IsNewVersionOf: 'IsPreviousVersionOf',
+            IsPreviousVersionOf: 'IsNewVersionOf',
+            IsVariantFormOf: 'IsOriginalFormOf',
+            IsOriginalFormOf: 'IsVariantFormOf',
+            Continues: 'IsContinuedBy',
+            IsContinuedBy: 'Continues',
+            HasPart: 'IsPartOf',
+            IsPartOf: 'HasPart',
+        };
+
+        // Only return reverse relation if it exists in our map, otherwise return null
+        return relationMap[relation] || null;
+    }
+
+    private printMissingReferencesList(missingReferences: MissingCrossReference[]) {
+        console.log('┌─────────────────────────────────────────────────────────────────────────────────┐');
+        console.log('│                         MISSING CROSS-REFERENCES REPORT                        │');
+        console.log('│                     (Published Datasets Only - Filtered Relations)            │');
+        console.log('└─────────────────────────────────────────────────────────────────────────────────┘');
+        console.log();
+
+        missingReferences.forEach((missing, index) => {
+            console.log(
+                `${index + 1}. Dataset ${missing.sourceDatasetId} (Publish ID: ${missing.sourcePublishId} Identifier: ${missing.sourceDoi}) 
+                ${missing.relation} Dataset ${missing.targetDatasetId} (Publish ID: ${missing.targetPublishId} Identifier: ${missing.targetDoi})`,
+            );
+            console.log(`   ├─ Current relation: "${missing.relation}"`);
+            console.log(`   ├─ Missing reverse relation: "${missing.reverseRelation}"`);
+            console.log(`   ├─ Reference type: ${missing.referenceType}`);
+            console.log(`   └─ DOI/URL: ${missing.doi}`);
+            console.log();
+        });
+
+        console.log('┌─────────────────────────────────────────────────────────────────────────────────┐');
+        console.log(`│ SUMMARY: ${missingReferences.length} missing reverse reference(s) detected                      │`);
+        console.log(`│ Processed relations: ${this.ALLOWED_RELATIONS.join(', ')}                           │`);
+        console.log('└─────────────────────────────────────────────────────────────────────────────────┘');
+    }
+
+    private async fixMissingReferences(missingReferences: MissingCrossReference[]) {
+        this.logger.info('🔧 Creating missing cross-references in database...');
+
+        let fixedCount = 0;
+        let errorCount = 0;
+
+        for (const [index, missing] of missingReferences.entries()) {
+            try {
+                // Get both source and target datasets
+                const sourceDataset = await Dataset.query()
+                    .where('id', missing.sourceDatasetId)
+                    .where('server_state', 'published')
+                    .preload('identifier')
+                    .preload('titles') // Preload titles to get mainTitle
+                    .first();
+
+                const targetDataset = await Dataset.query().where('id', missing.targetDatasetId).where('server_state', 'published').first();
+
+                if (!sourceDataset) {
+                    this.logger.warning(`⚠️  Source dataset ${missing.sourceDatasetId} not found or not published, skipping...`);
+                    errorCount++;
+                    continue;
+                }
+
+                if (!targetDataset) {
+                    this.logger.warning(`⚠️  Target dataset ${missing.targetDatasetId} not found or not published, skipping...`);
+                    errorCount++;
+                    continue;
+                }
+
+                // **NEW: Update the original reference if related_document_id is missing**
+                const originalReference = await DatasetReference.query()
+                    .where('document_id', missing.sourceDatasetId)
+                    .where('relation', missing.relation)
+                    .where('value', 'like', `%${missing.targetDoi}%`)
+                    .first();
+                if (originalReference && !originalReference.related_document_id) {
+                    originalReference.related_document_id = missing.targetDatasetId;
+                    await originalReference.save();
+                    if (this.verbose) {
+                        this.logger.info(`🔗 Updated original reference with related_document_id: ${missing.targetDatasetId}`);
+                    }
+                }
+
+                // Create the reverse reference using the referenced_by relationship
+                // Example: If Dataset 297 IsNewVersionOf Dataset 144
+                // We create an incoming reference for Dataset 144 that shows Dataset 297 IsPreviousVersionOf it
+                const reverseReference = new DatasetReference();
+                // Don't set document_id - this creates an incoming reference via related_document_id
+                reverseReference.document_id = missing.targetDatasetId; //
+                reverseReference.related_document_id = missing.sourceDatasetId;
+                reverseReference.type = 'DOI';
+                reverseReference.relation = missing.reverseRelation;
+
+                // Use the source dataset's DOI for the value (what's being referenced)
+                if (sourceDataset.identifier?.value) {
+                    reverseReference.value = `https://doi.org/${sourceDataset.identifier.value}`;
+                } else {
+                    // Fallback to dataset URL if no DOI
+                    reverseReference.value = `https://tethys.at/dataset/${sourceDataset.publish_id || missing.sourceDatasetId}`;
+                }
+
+                // Use the source dataset's main title for the label
+                //reverseReference.label = sourceDataset.mainTitle || `Dataset ${missing.sourceDatasetId}`;
+                // get label of forward reference
+                reverseReference.label = missing.sourceReferenceLabel || sourceDataset.mainTitle || `Dataset ${missing.sourceDatasetId}`;
+                // reverseReference.notes = `Auto-created by detect:missing-cross-references command on ${DateTime.now().toISO()} to fix missing bidirectional reference.`;
+
+                // Save the new reverse reference
+                // Also save 'server_date_modified' on target dataset to trigger any downstream updates (e.g. search index)
+                targetDataset.server_date_modified = DateTime.now();
+                await targetDataset.save();
+
+                await reverseReference.save();
+                fixedCount++;
+
+                if (this.verbose) {
+                    this.logger.info(
+                        `✅ [${index + 1}/${missingReferences.length}] Created reverse reference: Dataset ${missing.sourceDatasetId} -> ${missing.targetDatasetId} (${missing.reverseRelation})`,
+                    );
+                } else if ((index + 1) % 10 === 0) {
+                    this.logger.info(`📈 Fixed ${fixedCount}/${missingReferences.length} references...`);
+                }
+            } catch (error) {
+                this.logger.error(
+                    `❌ Error creating reverse reference for datasets ${missing.targetDatasetId} -> ${missing.sourceDatasetId}:`,
+                    error,
+                );
+                errorCount++;
+            }
+        }
+
+        this.logger.info(`📊 Fix completed: ${fixedCount} created, ${errorCount} errors`);
+    }
+}

commands/index_datasets.ts

@@ -4,7 +4,7 @@
 import { XMLBuilder } from 'xmlbuilder2/lib/interfaces.js';
 import { create } from 'xmlbuilder2';
 import Dataset from '#models/dataset';
-import XmlModel from '#app/Library/XmlModel';
+import XmlModel from '#app/Library/DatasetXmlSerializer';
 import { readFileSync } from 'fs';
 import SaxonJS from 'saxon-js';
 import { Client } from '@opensearch-project/opensearch';
@@ -12,10 +12,8 @@ import { getDomain } from '#app/utils/utility-functions';
 import { BaseCommand, flags } from '@adonisjs/core/ace';
 import { CommandOptions } from '@adonisjs/core/types/ace';
 import env from '#start/env';
-// import db from '@adonisjs/lucid/services/db';
-// import { default as Dataset } from '#models/dataset';
 import logger from '@adonisjs/core/services/logger';
-
+import { DateTime } from 'luxon';
 
 const opensearchNode = env.get('OPENSEARCH_HOST', 'localhost');
 const client = new Client({ node: `${opensearchNode}` }); // replace with your OpenSearch endpoint
@@ -30,11 +28,10 @@ export default class IndexDatasets extends BaseCommand {
     public publish_id: number;
 
     public static options: CommandOptions = {
-        startApp: true,       
+        startApp: true, // Ensures the IoC container is ready to use
-        staysAlive: false,
+        staysAlive: false, // Command exits after running
     };
 
-
     async run() {
         logger.debug('Hello world!');
         // const { default: Dataset } = await import('#models/dataset');
@@ -44,10 +41,12 @@ export default class IndexDatasets extends BaseCommand {
         const index_name = 'tethys-records';
 
         for (var dataset of datasets) {
-            // Logger.info(`File publish_id ${dataset.publish_id}`);
+            const shouldUpdate = await this.shouldUpdateDataset(dataset, index_name);
-            // const jsonString = await this.getJsonString(dataset, proc);
+            if (shouldUpdate) {
-            // console.log(jsonString);
+                await this.indexDocument(dataset, index_name, proc);
-            await this.indexDocument(dataset, index_name, proc);
+            } else {
+                logger.info(`Dataset with publish_id ${dataset.publish_id} is up to date, skipping indexing`);
+            }
         }
     }
 
@@ -65,6 +64,46 @@ export default class IndexDatasets extends BaseCommand {
         return await query.exec();
     }
 
+    private async shouldUpdateDataset(dataset: Dataset, index_name: string): Promise<boolean> {
+        try {
+            // Check if publish_id exists before proceeding
+            if (!dataset.publish_id) {
+                // Return true to update since document doesn't exist in OpenSearch yet
+                return true;
+            }
+            // Get the existing document from OpenSearch
+            const response = await client.get({
+                index: index_name,
+                id: dataset.publish_id?.toString(),
+            });
+
+            const existingDoc = response.body._source;
+
+            // Compare server_date_modified
+            if (existingDoc && existingDoc.server_date_modified) {
+                // Convert Unix timestamp (seconds) to milliseconds for DateTime.fromMillis()
+                const existingModified = DateTime.fromMillis(Number(existingDoc.server_date_modified) * 1000);
+                const currentModified = dataset.server_date_modified;
+
+                // Only update if the dataset has been modified more recently
+                if (currentModified <= existingModified) {
+                    return false;
+                }
+            }
+
+            return true;
+        } catch (error) {
+            // If document doesn't exist or other error, we should index it
+            if (error.statusCode === 404) {
+                logger.info(`Dataset with publish_id ${dataset.publish_id} not found in index, will create new document`);
+                return true;
+            }
+
+            logger.warn(`Error checking existing document for publish_id ${dataset.publish_id}: ${error.message}`);
+            return true; // Index anyway if we can't determine the status
+        }
+    }
+
     private async indexDocument(dataset: Dataset, index_name: string, proc: Buffer): Promise<void> {
         try {
             const doc = await this.getJsonString(dataset, proc);
@@ -78,7 +117,8 @@ export default class IndexDatasets extends BaseCommand {
             });
             logger.info(`dataset with publish_id ${dataset.publish_id} successfully indexed`);
         } catch (error) {
-            logger.error(`An error occurred while indexing dataset with publish_id ${dataset.publish_id}.`);
+            logger.error(`An error occurred while indexing dataset with publish_id ${dataset.publish_id}.
+                Error: ${error.message}`);
         }
     }
 
@@ -111,19 +151,16 @@ export default class IndexDatasets extends BaseCommand {
     }
 
     private async getDatasetXmlDomNode(dataset: Dataset): Promise<XMLBuilder | null> {
-        const xmlModel = new XmlModel(dataset);
+        const serializer = new XmlModel(dataset).enableCaching().excludeEmptyFields();
         // xmlModel.setModel(dataset);
-        xmlModel.excludeEmptyFields();
+
-        xmlModel.caching = true;
-        // const cache = dataset.xmlCache ? dataset.xmlCache : null;
-        // dataset.load('xmlCache');
         if (dataset.xmlCache) {
-            xmlModel.xmlCache = dataset.xmlCache;
+            serializer.setCache(dataset.xmlCache);
         }
 
-        // return cache.getDomDocument();
+        // return cache.toXmlDocument();
-        const domDocument: XMLBuilder | null = await xmlModel.getDomDocument();
+        const xmlDocument: XMLBuilder | null = await serializer.toXmlDocument();
-        return domDocument;
+        return xmlDocument;
     }
 
     private addSpecInformation(domNode: XMLBuilder, information: string) {

commands/list_updatable_datacite.ts

@@ -0,0 +1,346 @@
+/*
+|--------------------------------------------------------------------------
+| node ace make:command list-updateable-datacite
+| DONE:    create commands/list_updeatable_datacite.ts
+|--------------------------------------------------------------------------
+*/
+import { BaseCommand, flags } from '@adonisjs/core/ace';
+import { CommandOptions } from '@adonisjs/core/types/ace';
+import Dataset from '#models/dataset';
+import { DoiClient } from '#app/Library/Doi/DoiClient';
+import env from '#start/env';
+import logger from '@adonisjs/core/services/logger';
+import { DateTime } from 'luxon';
+import pLimit from 'p-limit';
+
+export default class ListUpdateableDatacite extends BaseCommand {
+    static commandName = 'list:updateable-datacite';
+    static description = 'List all datasets that need DataCite DOI updates';
+
+    public static needsApplication = true;
+
+    // private chunkSize = 100; // Set chunk size for pagination
+
+    @flags.boolean({ alias: 'v', description: 'Verbose output showing detailed information' })
+    public verbose: boolean = false;
+
+    @flags.boolean({ alias: 'c', description: 'Show only count of updatable datasets' })
+    public countOnly: boolean = false;
+
+    @flags.boolean({ alias: 'i', description: 'Show only publish IDs (useful for scripting)' })
+    public idsOnly: boolean = false;
+
+    @flags.number({ description: 'Chunk size for processing datasets (default: 50)' })
+    public chunkSize: number = 50;
+
+    //example: node ace list:updateable-datacite
+    //example: node ace list:updateable-datacite --verbose
+    //example: node ace list:updateable-datacite --count-only
+    //example: node ace list:updateable-datacite --ids-only
+    //example: node ace list:updateable-datacite --chunk-size 50
+
+    public static options: CommandOptions = {
+        startApp: true,
+        stayAlive: false,
+    };
+
+    async run() {
+        const prefix = env.get('DATACITE_PREFIX', '');
+        const base_domain = env.get('BASE_DOMAIN', '');
+
+        if (!prefix || !base_domain) {
+            logger.error('Missing DATACITE_PREFIX or BASE_DOMAIN environment variables');
+            return;
+        }
+
+        // Prevent conflicting flags
+        if ((this.verbose && this.countOnly) || (this.verbose && this.idsOnly)) {
+            logger.error('Flags --verbose cannot be combined with --count-only or --ids-only');
+            return;
+        }
+
+        const chunkSize = this.chunkSize || 50;
+        let page = 1;
+        let hasMoreDatasets = true;
+        let totalProcessed = 0;
+        const updatableDatasets: Dataset[] = [];
+
+        if (!this.countOnly && !this.idsOnly) {
+            logger.info(`Processing datasets in chunks of ${chunkSize}...`);
+        }
+
+        while (hasMoreDatasets) {
+            const datasets = await this.getDatasets(page, chunkSize);
+
+            if (datasets.length === 0) {
+                hasMoreDatasets = false;
+                break;
+            }
+
+            if (!this.countOnly && !this.idsOnly) {
+                logger.info(`Processing chunk ${page} (${datasets.length} datasets)...`);
+            }
+
+            const chunkUpdatableDatasets = await this.processChunk(datasets);
+            updatableDatasets.push(...chunkUpdatableDatasets);
+            totalProcessed += datasets.length;
+
+            page += 1;
+            if (datasets.length < chunkSize) {
+                hasMoreDatasets = false;
+            }
+        }
+
+        if (!this.countOnly && !this.idsOnly) {
+            logger.info(`Processed ${totalProcessed} datasets total, found ${updatableDatasets.length} that need updates`);
+        }
+
+        if (this.countOnly) {
+            console.log(updatableDatasets.length);
+        } else if (this.idsOnly) {
+            updatableDatasets.forEach((dataset) => console.log(dataset.publish_id));
+        } else if (this.verbose) {
+            await this.showVerboseOutput(updatableDatasets);
+        } else {
+            this.showSimpleOutput(updatableDatasets);
+        }
+    }
+
+    /**
+     * Processes a chunk of datasets to determine which ones need DataCite updates
+     *
+     * This method handles parallel processing of datasets within a chunk, providing
+     * efficient error handling and filtering of results.
+     *
+     * @param datasets - Array of Dataset objects to process
+     * @returns Promise<Dataset[]> - Array of datasets that need updates
+     */
+    // private async processChunk(datasets: Dataset[]): Promise<Dataset[]> {
+    //     // Process datasets in parallel using Promise.allSettled for better error handling
+    //     //
+    //     // Why Promise.allSettled vs Promise.all?
+    //     // - Promise.all fails fast: if ANY promise rejects, the entire operation fails
+    //     // - Promise.allSettled waits for ALL promises: some can fail, others succeed
+    //     // - This is crucial for batch processing where we don't want one bad dataset
+    //     //   to stop processing of the entire chunk
+    //     const results = await Promise.allSettled(
+    //         datasets.map(async (dataset) => {
+    //             try {
+    //                 // Check if this specific dataset needs a DataCite update
+    //                 const needsUpdate = await this.shouldUpdateDataset(dataset);
+
+    //                 // Return the dataset if it needs update, null if it doesn't
+    //                 // This creates a sparse array that we'll filter later
+    //                 return needsUpdate ? dataset : null;
+    //             } catch (error) {
+    //                 // Error handling for individual dataset checks
+    //                 //
+    //                 // Log warnings only if we're not in silent modes (count-only or ids-only)
+    //                 // This prevents log spam when running automated scripts
+    //                 if (!this.countOnly && !this.idsOnly) {
+    //                     logger.warn(`Error checking dataset ${dataset.publish_id}: ${error.message}`);
+    //                 }
+
+    //                 // IMPORTANT DECISION: Return the dataset anyway if we can't determine status
+    //                 //
+    //                 // Why? It's safer to include a dataset that might not need updating
+    //                 // than to miss one that actually does need updating. This follows the
+    //                 // "fail-safe" principle - if we're unsure, err on the side of caution
+    //                 return dataset;
+    //             }
+    //         }),
+    //     );
+
+    //     // Filter and extract results from Promise.allSettled response
+    //     //
+    //     // Promise.allSettled returns an array of objects with this structure:
+    //     // - { status: 'fulfilled', value: T } for successful promises
+    //     // - { status: 'rejected', reason: Error } for failed promises
+    //     //
+    //     // We need to:
+    //     // 1. Only get fulfilled results (rejected ones are already handled above)
+    //     // 2. Filter out null values (datasets that don't need updates)
+    //     // 3. Extract the actual Dataset objects from the wrapper
+    //     return results
+    //         .filter(
+    //             (result): result is PromiseFulfilledResult<Dataset | null> =>
+    //                 // Type guard: only include fulfilled results that have actual values
+    //                 // This filters out:
+    //                 // - Rejected promises (shouldn't happen due to try/catch, but safety first)
+    //                 // - Fulfilled promises that returned null (datasets that don't need updates)
+    //                 result.status === 'fulfilled' && result.value !== null,
+    //         )
+    //         .map((result) => result.value!); // Extract the Dataset from the wrapper
+    //     // The ! is safe here because we filtered out null values above
+    // }
+
+    private async processChunk(datasets: Dataset[]): Promise<Dataset[]> {
+        // Limit concurrency to avoid API flooding (e.g., max 5 at once)
+        const limit = pLimit(5);
+
+        const tasks = datasets.map((dataset) =>
+            limit(async () => {
+                try {
+                    const needsUpdate = await this.shouldUpdateDataset(dataset);
+                    return needsUpdate ? dataset : null;
+                } catch (error) {
+                    if (!this.countOnly && !this.idsOnly) {
+                        logger.warn(
+                            `Error checking dataset ${dataset.publish_id}: ${
+                                error instanceof Error ? error.message : JSON.stringify(error)
+                            }`,
+                        );
+                    }
+                    // Fail-safe: include dataset if uncertain
+                    return dataset;
+                }
+            }),
+        );
+
+        const results = await Promise.allSettled(tasks);
+
+        return results
+            .filter((result): result is PromiseFulfilledResult<Dataset | null> => result.status === 'fulfilled' && result.value !== null)
+            .map((result) => result.value!);
+    }
+
+    private async getDatasets(page: number, chunkSize: number): Promise<Dataset[]> {
+        return await Dataset.query()
+            .orderBy('publish_id', 'asc')
+            .preload('identifier')
+            .preload('xmlCache')
+            .preload('titles')
+            .where('server_state', 'published')
+            .whereHas('identifier', (identifierQuery) => {
+                identifierQuery.where('type', 'doi');
+            })
+            .forPage(page, chunkSize); // Get files for the current page
+    }
+
+    private async shouldUpdateDataset(dataset: Dataset): Promise<boolean> {
+        try {
+            let doiIdentifier = dataset.identifier;
+            if (!doiIdentifier) {
+                await dataset.load('identifier');
+                doiIdentifier = dataset.identifier;
+            }
+
+            if (!doiIdentifier || doiIdentifier.type !== 'doi') {
+                return false;
+            }
+
+            const datasetModified =
+                dataset.server_date_modified instanceof DateTime
+                    ? dataset.server_date_modified
+                    : DateTime.fromJSDate(dataset.server_date_modified);
+
+            if (!datasetModified) {
+                return true;
+            }
+
+            if (datasetModified > DateTime.now()) {
+                return false;
+            }
+
+            const doiClient = new DoiClient();
+            const DOI_CHECK_TIMEOUT = 300; // ms
+
+            const doiLastModified = await Promise.race([
+                doiClient.getDoiLastModified(doiIdentifier.value),
+                this.createTimeoutPromise(DOI_CHECK_TIMEOUT),
+            ]).catch(() => null);
+
+            if (!doiLastModified) {
+                // If uncertain, better include dataset for update
+                return true;
+            }
+
+            const doiModified = DateTime.fromJSDate(doiLastModified);
+            if (datasetModified > doiModified) {
+                const diffInSeconds = Math.abs(datasetModified.diff(doiModified, 'seconds').seconds);
+                const toleranceSeconds = 600;
+                return diffInSeconds > toleranceSeconds;
+            }
+            return false;
+        } catch (error) {
+            return true; // safer: include dataset if unsure
+        }
+    }
+
+    /**
+     * Create a timeout promise for API calls
+     */
+    private createTimeoutPromise(timeoutMs: number): Promise<never> {
+        return new Promise((_, reject) => {
+            setTimeout(() => reject(new Error(`API call timeout after ${timeoutMs}ms`)), timeoutMs);
+        });
+    }
+
+    private showSimpleOutput(updatableDatasets: Dataset[]): void {
+        if (updatableDatasets.length === 0) {
+            console.log('No datasets need DataCite updates.');
+            return;
+        }
+
+        console.log(`\nFound ${updatableDatasets.length} dataset(s) that need DataCite updates:\n`);
+
+        updatableDatasets.forEach((dataset) => {
+            console.log(`publish_id  ${dataset.publish_id} needs update - ${dataset.mainTitle || 'Untitled'}`);
+        });
+
+        console.log(`\nTo update these datasets, run:`);
+        console.log(`  node ace update:datacite`);
+        console.log(`\nOr update specific datasets:`);
+        console.log(`  node ace update:datacite -p <publish_id>`);
+    }
+
+    private async showVerboseOutput(updatableDatasets: Dataset[]): Promise<void> {
+        if (updatableDatasets.length === 0) {
+            console.log('No datasets need DataCite updates.');
+            return;
+        }
+
+        console.log(`\nFound ${updatableDatasets.length} dataset(s) that need DataCite updates:\n`);
+
+        for (const dataset of updatableDatasets) {
+            await this.showDatasetDetails(dataset);
+        }
+
+        console.log(`\nSummary: ${updatableDatasets.length} datasets need updates`);
+    }
+
+    private async showDatasetDetails(dataset: Dataset): Promise<void> {
+        try {
+            let doiIdentifier = dataset.identifier;
+
+            if (!doiIdentifier) {
+                await dataset.load('identifier');
+                doiIdentifier = dataset.identifier;
+            }
+
+            const doiValue = doiIdentifier?.value || 'N/A';
+            const datasetModified = dataset.server_date_modified;
+
+            // Get DOI info from DataCite
+            const doiClient = new DoiClient();
+            const doiLastModified = await doiClient.getDoiLastModified(doiValue);
+            const doiState = await doiClient.getDoiState(doiValue);
+
+            console.log(`┌─ Dataset ${dataset.publish_id} ───────────────────────────────────────────────────────────────`);
+            console.log(`│ Title:               ${dataset.mainTitle || 'Untitled'}`);
+            console.log(`│ DOI:                 ${doiValue}`);
+            console.log(`│ DOI State:           ${doiState || 'Unknown'}`);
+            console.log(`│ Dataset Modified:    ${datasetModified ? datasetModified.toISO() : 'N/A'}`);
+            console.log(`│ DOI Modified:        ${doiLastModified ? DateTime.fromJSDate(doiLastModified).toISO() : 'N/A'}`);
+            console.log(`│ Status:              NEEDS UPDATE`);
+            console.log(`└─────────────────────────────────────────────────────────────────────────────────────────────\n`);
+        } catch (error) {
+            console.log(`┌─ Dataset ${dataset.publish_id} ───────────────────────────────────────────────────────────────`);
+            console.log(`│ Title:               ${dataset.mainTitle || 'Untitled'}`);
+            console.log(`│ DOI:                 ${dataset.identifier?.value || 'N/A'}`);
+            console.log(`│ Error:               ${error.message}`);
+            console.log(`│ Status:              NEEDS UPDATE (Error checking)`);
+            console.log(`└─────────────────────────────────────────────────────────────────────────────────────────────\n`);
+        }
+    }
+}

commands/update_datacite.ts

@@ -0,0 +1,266 @@
+/*
+|--------------------------------------------------------------------------
+| node ace make:command update-datacite
+| DONE:    create commands/update_datacite.ts
+|--------------------------------------------------------------------------
+*/
+import { BaseCommand, flags } from '@adonisjs/core/ace';
+import { CommandOptions } from '@adonisjs/core/types/ace';
+import Dataset from '#models/dataset';
+import { DoiClient } from '#app/Library/Doi/DoiClient';
+import DoiClientException from '#app/exceptions/DoiClientException';
+import Index from '#app/Library/Utils/Index';
+import env from '#start/env';
+import logger from '@adonisjs/core/services/logger';
+import { DateTime } from 'luxon';
+import { getDomain } from '#app/utils/utility-functions';
+
+export default class UpdateDatacite extends BaseCommand {
+    static commandName = 'update:datacite';
+    static description = 'Update DataCite DOI records for published datasets';
+
+    public static needsApplication = true;
+
+    @flags.number({ alias: 'p', description: 'Specific publish_id to update' })
+    public publish_id: number;
+
+    @flags.boolean({ alias: 'f', description: 'Force update all records regardless of modification date' })
+    public force: boolean = false;
+
+    @flags.boolean({ alias: 'd', description: 'Dry run - show what would be updated without making changes' })
+    public dryRun: boolean = false;
+
+    @flags.boolean({ alias: 's', description: 'Show detailed stats for each dataset that needs updating' })
+    public stats: boolean = false;
+
+    //example: node ace update:datacite -p 123 --force --dry-run
+
+    public static options: CommandOptions = {
+        startApp: true, // Whether to boot the application before running the command
+        stayAlive: false, // Whether to keep the process alive after the command has executed
+    };
+
+    async run() {
+        logger.info('Starting DataCite update process...');
+
+        const prefix = env.get('DATACITE_PREFIX', '');
+        const base_domain = env.get('BASE_DOMAIN', '');
+        const apiUrl = env.get('DATACITE_API_URL', 'https://api.datacite.org');
+
+        if (!prefix || !base_domain) {
+            logger.error('Missing DATACITE_PREFIX or BASE_DOMAIN environment variables');
+            return;
+        }
+
+        logger.info(`Using DataCite API: ${apiUrl}`);
+
+        const datasets = await this.getDatasets();
+        logger.info(`Found ${datasets.length} datasets to process`);
+
+        let updated = 0;
+        let skipped = 0;
+        let errors = 0;
+
+        for (const dataset of datasets) {
+            try {
+                const shouldUpdate = this.force || (await this.shouldUpdateDataset(dataset));
+
+                if (this.stats) {
+                    // Stats mode: show detailed information for datasets that need updating
+                    if (shouldUpdate) {
+                        await this.showDatasetStats(dataset);
+                        updated++;
+                    } else {
+                        skipped++;
+                    }
+                    continue;
+                }
+
+                if (!shouldUpdate) {
+                    logger.info(`Dataset ${dataset.publish_id}: Up to date, skipping`);
+                    skipped++;
+                    continue;
+                }
+
+                if (this.dryRun) {
+                    logger.info(`Dataset ${dataset.publish_id}: Would update DataCite record (dry run)`);
+                    updated++;
+                    continue;
+                }
+
+                await this.updateDataciteRecord(dataset, prefix, base_domain);
+                logger.info(`Dataset ${dataset.publish_id}: Successfully updated DataCite record`);
+                updated++;
+            } catch (error) {
+                logger.error(`Dataset ${dataset.publish_id}: Failed to update - ${error.message}`);
+                errors++;
+            }
+        }
+
+        if (this.stats) {
+            logger.info(`\nDataCite Stats Summary: ${updated} datasets need updating, ${skipped} are up to date`);
+        } else {
+            logger.info(`DataCite update completed. Updated: ${updated}, Skipped: ${skipped}, Errors: ${errors}`);
+        }
+    }
+
+    private async getDatasets(): Promise<Dataset[]> {
+        const query = Dataset.query()
+            .preload('identifier')
+            .preload('xmlCache')
+            .where('server_state', 'published')
+            .whereHas('identifier', (identifierQuery) => {
+                identifierQuery.where('type', 'doi');
+            });
+
+        if (this.publish_id) {
+            query.where('publish_id', this.publish_id);
+        }
+
+        return await query.exec();
+    }
+
+    private async shouldUpdateDataset(dataset: Dataset): Promise<boolean> {
+        try {
+            let doiIdentifier = dataset.identifier;
+
+            if (!doiIdentifier) {
+                await dataset.load('identifier');
+                doiIdentifier = dataset.identifier;
+            }
+
+            if (!doiIdentifier || doiIdentifier.type !== 'doi') {
+                return false;
+            }
+
+            const datasetModified = dataset.server_date_modified;
+            const now = DateTime.now();
+
+            if (!datasetModified) {
+                return true; // Update if modification date is missing
+            }
+
+            if (datasetModified > now) {
+                return false; // Skip invalid future dates
+            }
+
+            // Check DataCite DOI modification date
+            const doiClient = new DoiClient();
+            const doiLastModified = await doiClient.getDoiLastModified(doiIdentifier.value);
+
+            if (!doiLastModified) {
+                return false; // not Update if we can't get DOI info
+            }
+
+            const doiModified = DateTime.fromJSDate(doiLastModified);
+            if (datasetModified > doiModified) {
+                // if dataset was modified after DOI creation 
+                // Calculate the difference in seconds
+                const diffInSeconds = Math.abs(datasetModified.diff(doiModified, 'seconds').seconds);
+
+                // Define tolerance threshold (60 seconds = 1 minute)
+                const toleranceSeconds = 60;
+
+                // Only update if the difference is greater than the tolerance
+                // This prevents unnecessary updates for minor timestamp differences
+                return diffInSeconds > toleranceSeconds;
+            } else {
+                return false; // No update needed
+            }
+        } catch (error) {
+            return false; // not update if we can't determine status or other error
+        }
+    }
+
+    private async updateDataciteRecord(dataset: Dataset, prefix: string, base_domain: string): Promise<void> {
+        try {
+            // Get the DOI identifier (HasOne relationship)
+            let doiIdentifier = dataset.identifier;
+
+            if (!doiIdentifier) {
+                await dataset.load('identifier');
+                doiIdentifier = dataset.identifier;
+            }
+
+            if (!doiIdentifier || doiIdentifier.type !== 'doi') {
+                throw new Error('No DOI identifier found for dataset');
+            }
+
+            // Generate XML metadata
+            const xmlMeta = (await Index.getDoiRegisterString(dataset)) as string;
+            if (!xmlMeta) {
+                throw new Error('Failed to generate XML metadata');
+            }
+
+            // Construct DOI value and landing page URL
+            const doiValue = doiIdentifier.value; // Use existing DOI value
+            const landingPageUrl = `https://doi.${getDomain(base_domain)}/${doiValue}`;
+
+            // Update DataCite record
+            const doiClient = new DoiClient();
+            const dataciteResponse = await doiClient.registerDoi(doiValue, xmlMeta, landingPageUrl);
+
+            if (dataciteResponse?.status === 201) {
+                // // Update dataset modification date
+                // dataset.server_date_modified = DateTime.now();
+                // await dataset.save();
+
+                // // Update search index
+                // const index_name = 'tethys-records';
+                // await Index.indexDocument(dataset, index_name);
+
+                logger.debug(`Dataset ${dataset.publish_id}: DataCite record and search index updated successfully`);
+            } else {
+                throw new DoiClientException(
+                    dataciteResponse?.status || 500,
+                    `Unexpected DataCite response code: ${dataciteResponse?.status}`,
+                );
+            }
+        } catch (error) {
+            if (error instanceof DoiClientException) {
+                throw error;
+            }
+            throw new Error(`Failed to update DataCite record: ${error.message}`);
+        }
+    }
+
+    /**
+     * Shows detailed statistics for a dataset that needs updating
+     */
+    private async showDatasetStats(dataset: Dataset): Promise<void> {
+        try {
+            let doiIdentifier = dataset.identifier;
+
+            if (!doiIdentifier) {
+                await dataset.load('identifier');
+                doiIdentifier = dataset.identifier;
+            }
+
+            const doiValue = doiIdentifier?.value || 'N/A';
+            const doiStatus = doiIdentifier?.status || 'N/A';
+            const datasetModified = dataset.server_date_modified;
+
+            // Get DOI info from DataCite
+            const doiClient = new DoiClient();
+            const doiLastModified = await doiClient.getDoiLastModified(doiValue);
+            const doiState = await doiClient.getDoiState(doiValue);
+
+            console.log(`
+            ┌─ Dataset ${dataset.publish_id} ───────────────────────────────────────────────────────────────
+            │ DOI Value:           ${doiValue}
+            │ DOI Status (DB):     ${doiStatus}
+            │ DOI State (DataCite): ${doiState || 'Unknown'}
+            │ Dataset Modified:    ${datasetModified ? datasetModified.toISO() : 'N/A'}
+            │ DOI Modified:        ${doiLastModified ? DateTime.fromJSDate(doiLastModified).toISO() : 'N/A'}
+            │ Needs Update:        YES - Dataset newer than DOI
+            └─────────────────────────────────────────────────────────────────────────────────────────────`);
+        } catch (error) {
+            console.log(`
+            ┌─ Dataset ${dataset.publish_id} ───────────────────────────────────────────────────────────────
+            │ DOI Value:           ${dataset.identifier?.value || 'N/A'}
+            │ Error:               ${error.message}
+            │ Needs Update:        YES - Error checking status
+            └─────────────────────────────────────────────────────────────────────────────────────────────`);
+        }
+    }
+}

components.d.ts

@@ -11,3 +11,21 @@ declare module '@vue/runtime-core' {
         NInput: (typeof import('naive-ui'))['NInput'];
     }
 }
+
+// types/leaflet-src-dom-DomEvent.d.ts
+declare module 'leaflet/src/dom/DomEvent' {
+    export type DomEventHandler = (e?: any) => void;
+
+    // Attach event listeners. `obj` can be any DOM node or object with event handling.
+    export function on(obj: any, types: string, fn: DomEventHandler, context?: any): void;
+
+    // Detach event listeners.
+    export function off(obj: any, types: string, fn?: DomEventHandler, context?: any): void;
+
+    // Prevent default on native events
+    export function preventDefault(ev?: Event | undefined): void;
+
+    // Optional: other helpers you might need later
+    export function stopPropagation(ev?: Event | undefined): void;
+    export function stop(ev?: Event | undefined): void;
+}

docker-entrypoint.sh

@@ -1,47 +1,74 @@
 #!/bin/bash
-
-# # Run freshclam to update virus definitions
-# freshclam
-
-# # Sleep for a few seconds to give ClamAV time to start
-# sleep 5
-
-# # Start the ClamAV daemon
-# /etc/init.d/clamav-daemon start
-
-# bootstrap clam av service and clam av database updater
 set -m
 
-function process_file() {
+echo "Starting ClamAV services..."
-    if [[ ! -z "$1" ]]; then
-        local SETTING_LIST=$(echo "$1" | tr ',' '\n' | grep "^[A-Za-z][A-Za-z]*=.*$")
-        local SETTING
 
-        for SETTING in ${SETTING_LIST}; do
-            # Remove any existing copies of this setting.  We do this here so that
-            # settings with multiple values (e.g. ExtraDatabase) can still be added
-            # multiple times below
-            local KEY=${SETTING%%=*}
-            sed -i $2 -e "/^${KEY} /d"
-        done
 
-        for SETTING in ${SETTING_LIST}; do
+# Try to download database if missing
-            # Split on first '='
+# if [ ! "$(ls -A /var/lib/clamav 2>/dev/null)" ]; then
-            local KEY=${SETTING%%=*}
+#     echo "Downloading ClamAV database (this may take a while)..."
-            local VALUE=${SETTING#*=}
-            echo "${KEY} ${VALUE}" >> "$2"
-        done
-    fi
-}
     
-# process_file "${CLAMD_SETTINGS_CSV}" /etc/clamav/clamd.conf
+#     # Simple freshclam run without complex config
-# process_file "${FRESHCLAM_SETTINGS_CSV}" /etc/clamav/freshclam.conf
+#     if freshclam --datadir=/var/lib/clamav --quiet; then
+#         echo "✓ Database downloaded successfully"
+#     else
+#         echo "⚠ Database download failed - creating minimal setup"
+#         # Create a dummy file so clamd doesn't immediately fail
+#        touch /var/lib/clamav/.dummy
+#     fi
+# fi
+
+# Start freshclam daemon for automatic updates
+echo "Starting freshclam daemon for automatic updates..."
+# sg clamav -c "freshclam -d" &
+# Added --daemon-notify to freshclam - This notifies clamd when the database updates
+freshclam -d --daemon-notify=/etc/clamav/clamd.conf &
+#freshclam -d &
 
-# start in background
-freshclam -d &
 # /etc/init.d/clamav-freshclam start &
-clamd
+# Start clamd in background
+# Start clamd in foreground (so dumb-init can supervise it)
 # /etc/init.d/clamav-daemon start &
 
-# change back to CMD of dockerfile
+# Give freshclam a moment to start
+sleep 2
+
+# Start clamd daemon in background using sg
+echo "Starting ClamAV daemon..."
+# sg clamav -c "clamd" &
+# Use sg to run clamd with proper group permissions
+# sg clamav -c "clamd" &
+# clamd --config-file=/etc/clamav/clamd.conf &
+clamd &
+
+
+# Give services time to start
+echo "Waiting for services to initialize..."
+sleep 8
+
+# simple check
+if pgrep clamd > /dev/null; then
+    echo "✓ ClamAV daemon is running"
+else
+    echo "⚠ ClamAV daemon status uncertain, but continuing..."
+fi
+
+# Check if freshclam daemon is running
+if pgrep freshclam > /dev/null; then
+    echo "✓ Freshclam daemon is running"
+else
+    echo "⚠ Freshclam daemon status uncertain, but continuing..."
+fi
+
+# # Optional: Test socket connectivity
+# if [ -S /var/run/clamav/clamd.socket ]; then
+#     echo "✓ ClamAV socket exists"
+# else
+#     echo "⚠ WARNING: ClamAV socket not found - services may still be starting"
+# fi
+
+# # change back to CMD of dockerfile
+echo "✓ ClamAV setup complete"
+echo "Starting main application..."
+# exec dumb-init -- "$@"
 exec "$@"

docs/commands/index-datasets.md

@@ -0,0 +1,278 @@
+# Dataset Indexing Command
+
+AdonisJS Ace command for indexing and synchronizing published datasets with OpenSearch for search functionality.
+
+## Overview
+
+The `index:datasets` command processes published datasets and creates/updates corresponding search index documents in OpenSearch. It intelligently compares modification timestamps to only re-index datasets when necessary, optimizing performance while maintaining search index accuracy.
+
+## Command Syntax
+
+```bash
+node ace index:datasets [options]
+```
+
+## Options
+
+| Flag | Alias | Description |
+|------|-------|-------------|
+| `--publish_id <number>` | `-p` | Index a specific dataset by publish_id |
+
+## Usage Examples
+
+### Basic Operations
+
+```bash
+# Index all published datasets that have been modified since last indexing
+node ace index:datasets
+
+# Index a specific dataset by publish_id
+node ace index:datasets --publish_id 231
+node ace index:datasets -p 231
+```
+
+## How It Works
+
+### 1. **Dataset Selection**
+The command processes datasets that meet these criteria:
+- `server_state = 'published'` - Only published datasets
+- Has preloaded `xmlCache` relationship for metadata transformation
+- Optionally filtered by specific `publish_id`
+
+### 2. **Smart Update Detection**
+For each dataset, the command:
+- Checks if the dataset exists in the OpenSearch index
+- Compares `server_date_modified` timestamps
+- Only re-indexes if the dataset is newer than the indexed version
+
+### 3. **Document Processing**
+The indexing process involves:
+1. **XML Generation**: Creates structured XML from dataset metadata
+2. **XSLT Transformation**: Converts XML to JSON using Saxon-JS processor
+3. **Index Update**: Updates or creates the document in OpenSearch
+4. **Logging**: Records success/failure for each operation
+
+## Index Structure
+
+### Index Configuration
+- **Index Name**: `tethys-records`
+- **Document ID**: Dataset `publish_id`
+- **Refresh**: `true` (immediate availability)
+
+### Document Fields
+The indexed documents contain:
+- **Metadata Fields**: Title, description, authors, keywords
+- **Identifiers**: DOI, publish_id, and other identifiers
+- **Temporal Data**: Publication dates, coverage periods
+- **Geographic Data**: Spatial coverage information
+- **Technical Details**: Data formats, access information
+- **Timestamps**: Creation and modification dates
+
+## Example Output
+
+### Successful Run
+```bash
+node ace index:datasets
+```
+```
+Found 150 published datasets to process
+Dataset with publish_id 231 successfully indexed
+Dataset with publish_id 245 is up to date, skipping indexing
+Dataset with publish_id 267 successfully indexed
+An error occurred while indexing dataset with publish_id 289. Error: Invalid XML metadata
+Processing completed: 148 indexed, 1 skipped, 1 error
+```
+
+### Specific Dataset
+```bash
+node ace index:datasets --publish_id 231
+```
+```
+Found 1 published dataset to process
+Dataset with publish_id 231 successfully indexed
+Processing completed: 1 indexed, 0 skipped, 0 errors
+```
+
+## Update Logic
+
+The command uses intelligent indexing to avoid unnecessary processing:
+
+| Condition | Action | Reason |
+|-----------|--------|--------|
+| Dataset not in index | ✅ Index | New dataset needs indexing |
+| Dataset newer than indexed version | ✅ Re-index | Dataset has been updated |
+| Dataset same/older than indexed version | ❌ Skip | Already up to date |
+| OpenSearch document check fails | ✅ Index | Better safe than sorry |
+| Invalid XML metadata | ❌ Skip + Log Error | Cannot process invalid data |
+
+### Timestamp Comparison
+```typescript
+// Example comparison logic
+const existingModified = DateTime.fromMillis(Number(existingDoc.server_date_modified) * 1000);
+const currentModified = dataset.server_date_modified;
+
+if (currentModified <= existingModified) {
+    // Skip - already up to date
+    return false;
+}
+// Proceed with indexing
+```
+
+## XML Transformation Process
+
+### 1. **XML Generation**
+```xml
+<?xml version="1.0" encoding="UTF-8" standalone="true"?>
+<root>
+    <Dataset>
+        <!-- Dataset metadata fields -->
+        <title>Research Dataset Title</title>
+        <description>Dataset description...</description>
+        <!-- Additional metadata -->
+    </Dataset>
+</root>
+```
+
+### 2. **XSLT Processing**
+The command uses Saxon-JS with a compiled stylesheet (`solr.sef.json`) to transform XML to JSON:
+```javascript
+const result = await SaxonJS.transform({
+    stylesheetText: proc,
+    destination: 'serialized',
+    sourceText: xmlString,
+});
+```
+
+### 3. **Final JSON Document**
+```json
+{
+    "id": "231",
+    "title": "Research Dataset Title",
+    "description": "Dataset description...",
+    "authors": ["Author Name"],
+    "server_date_modified": 1634567890,
+    "publish_id": 231
+}
+```
+
+## Configuration Requirements
+
+### Environment Variables
+```bash
+# OpenSearch Configuration
+OPENSEARCH_HOST=localhost:9200
+
+# For production:
+# OPENSEARCH_HOST=your-opensearch-cluster:9200
+```
+
+### Required Files
+- **XSLT Stylesheet**: `public/assets2/solr.sef.json` - Compiled Saxon-JS stylesheet for XML transformation
+
+### Database Relationships
+The command expects these model relationships:
+```typescript
+// Dataset model must have:
+@hasOne(() => XmlCache, { foreignKey: 'dataset_id' })
+public xmlCache: HasOne<typeof XmlCache>
+```
+
+## Error Handling
+
+The command handles various error scenarios gracefully:
+
+### Common Errors and Solutions
+
+| Error | Cause | Solution |
+|-------|-------|----------|
+| `XSLT transformation failed` | Invalid XML or missing stylesheet | Check XML structure and stylesheet path |
+| `OpenSearch connection error` | Service unavailable | Verify OpenSearch is running and accessible |
+| `JSON parse error` | Malformed transformation result | Check XSLT stylesheet output format |
+| `Missing xmlCache relationship` | Data integrity issue | Ensure xmlCache exists for dataset |
+
+### Error Logging
+```bash
+# Typical error log entry
+An error occurred while indexing dataset with publish_id 231.
+Error: XSLT transformation failed: Invalid XML structure at line 15
+```
+
+## Performance Considerations
+
+### Batch Processing
+- Processes datasets sequentially to avoid overwhelming OpenSearch
+- Each dataset is committed individually for reliability
+- Failed indexing of one dataset doesn't stop processing others
+
+### Resource Usage
+- **Memory**: XML/JSON transformations require temporary memory
+- **Network**: OpenSearch API calls for each dataset
+- **CPU**: XSLT transformations are CPU-intensive
+
+### Optimization Tips
+```bash
+# Index only recently modified datasets (run regularly)
+node ace index:datasets
+
+# Index specific datasets when needed
+node ace index:datasets --publish_id 231
+
+# Consider running during off-peak hours for large batches
+```
+
+## Integration with Other Systems
+
+### Search Functionality
+The indexed documents power:
+- **Dataset Search**: Full-text search across metadata
+- **Faceted Browsing**: Filter by authors, keywords, dates
+- **Geographic Search**: Spatial query capabilities
+- **Auto-complete**: Suggest dataset titles and keywords
+
+### Related Commands
+- [`update:datacite`](update-datacite.md) - Often run after indexing to sync DOI metadata
+- **Database migrations** - May require re-indexing after schema changes
+
+### API Integration
+The indexed data is consumed by:
+- **Search API**: `/api/search` endpoints
+- **Browse API**: `/api/datasets` with filtering
+- **Recommendations**: Related dataset suggestions
+
+## Monitoring and Maintenance
+
+### Regular Tasks
+```bash
+# Daily indexing (recommended cron job)
+0 2 * * * cd /path/to/project && node ace index:datasets
+
+# Weekly full re-index (if needed)
+0 3 * * 0 cd /path/to/project && node ace index:datasets --force
+```
+
+### Health Checks
+- Monitor OpenSearch cluster health
+- Check for failed indexing operations in logs
+- Verify search functionality is working
+- Compare dataset counts between database and index
+
+### Troubleshooting
+```bash
+# Check specific dataset indexing
+node ace index:datasets --publish_id 231
+
+# Verify OpenSearch connectivity
+curl -X GET "localhost:9200/_cluster/health"
+
+# Check index statistics
+curl -X GET "localhost:9200/tethys-records/_stats"
+```
+
+## Best Practices
+
+1. **Regular Scheduling**: Run the command regularly (daily) to keep the search index current
+2. **Monitor Logs**: Watch for transformation errors or OpenSearch issues  
+3. **Backup Strategy**: Include OpenSearch indices in backup procedures
+4. **Resource Management**: Monitor OpenSearch cluster resources during bulk operations
+5. **Testing**: Verify search functionality after major indexing operations
+6. **Coordination**: Run indexing before DataCite updates when both are needed

docs/commands/update-datacite.md

@@ -0,0 +1,216 @@
+# DataCite Update Command
+
+AdonisJS Ace command for updating DataCite DOI records for published datasets.
+
+## Overview
+
+The `update:datacite` command synchronizes your local dataset metadata with DataCite DOI records. It intelligently compares modification dates to only update records when necessary, reducing unnecessary API calls and maintaining data consistency.
+
+## Command Syntax
+
+```bash
+node ace update:datacite [options]
+```
+
+## Options
+
+| Flag | Alias | Description |
+|------|-------|-------------|
+| `--publish_id <number>` | `-p` | Update a specific dataset by publish_id |
+| `--force` | `-f` | Force update all records regardless of modification date |
+| `--dry-run` | `-d` | Preview what would be updated without making changes |
+| `--stats` | `-s` | Show detailed statistics for datasets that need updating |
+
+## Usage Examples
+
+### Basic Operations
+
+```bash
+# Update all datasets that have been modified since their DOI was last updated
+node ace update:datacite
+
+# Update a specific dataset
+node ace update:datacite --publish_id 231
+node ace update:datacite -p 231
+
+# Force update all datasets with DOIs (ignores modification dates)
+node ace update:datacite --force
+```
+
+### Preview and Analysis
+
+```bash
+# Preview what would be updated (dry run)
+node ace update:datacite --dry-run
+
+# Show detailed statistics for datasets that need updating
+node ace update:datacite --stats
+
+# Show stats for a specific dataset
+node ace update:datacite --stats --publish_id 231
+```
+
+### Combined Options
+
+```bash
+# Dry run for a specific dataset
+node ace update:datacite --dry-run --publish_id 231
+
+# Show stats for all datasets (including up-to-date ones)
+node ace update:datacite --stats --force
+```
+
+## Command Modes
+
+### 1. **Normal Mode** (Default)
+Updates DataCite records for datasets that have been modified since their DOI was last updated.
+
+**Example Output:**
+```
+Using DataCite API: https://api.test.datacite.org
+Found 50 datasets to process
+Dataset 231: Successfully updated DataCite record
+Dataset 245: Up to date, skipping
+Dataset 267: Successfully updated DataCite record
+DataCite update completed. Updated: 15, Skipped: 35, Errors: 0
+```
+
+### 2. **Dry Run Mode** (`--dry-run`)
+Shows what would be updated without making any changes to DataCite.
+
+**Use Case:** Preview updates before running the actual command.
+
+**Example Output:**
+```
+Dataset 231: Would update DataCite record (dry run)
+Dataset 267: Would update DataCite record (dry run)
+Dataset 245: Up to date, skipping
+DataCite update completed. Updated: 2, Skipped: 1, Errors: 0
+```
+
+### 3. **Stats Mode** (`--stats`)
+Shows detailed information for each dataset that needs updating, including why it needs updating.
+
+**Use Case:** Debug synchronization issues, monitor dataset/DOI status, generate reports.
+
+**Example Output:**
+```
+┌─ Dataset 231 ─────────────────────────────────────────────────────────
+│ DOI Value:           10.21388/tethys.231
+│ DOI Status (DB):     findable
+│ DOI State (DataCite): findable
+│ Dataset Modified:    2024-09-15T10:30:00.000Z
+│ DOI Modified:        2024-09-10T08:15:00.000Z
+│ Needs Update:        YES - Dataset newer than DOI
+└───────────────────────────────────────────────────────────────────────
+
+┌─ Dataset 267 ─────────────────────────────────────────────────────────
+│ DOI Value:           10.21388/tethys.267
+│ DOI Status (DB):     findable
+│ DOI State (DataCite): findable
+│ Dataset Modified:    2024-09-18T14:20:00.000Z
+│ DOI Modified:        2024-09-16T12:45:00.000Z
+│ Needs Update:        YES - Dataset newer than DOI
+└───────────────────────────────────────────────────────────────────────
+
+DataCite Stats Summary: 2 datasets need updating, 48 are up to date
+```
+
+## Update Logic
+
+The command uses intelligent update detection:
+
+1. **Compares modification dates**: Dataset `server_date_modified` vs DOI last modification date from DataCite
+2. **Validates data integrity**: Checks for missing or future dates
+3. **Handles API failures gracefully**: Updates anyway if DataCite info can't be retrieved
+4. **Uses dual API approach**: DataCite REST API (primary) with MDS API fallback
+
+### When Updates Happen
+
+| Condition | Action | Reason |
+|-----------|--------|--------|
+| Dataset modified > DOI modified | ✅ Update | Dataset has newer changes |
+| Dataset modified ≤ DOI modified | ❌ Skip | DOI is up to date |
+| Dataset date in future | ❌ Skip | Invalid data, needs investigation |
+| Dataset date missing | ✅ Update | Can't determine staleness |
+| DataCite API error | ✅ Update | Better safe than sorry |
+| `--force` flag used | ✅ Update | Override all logic |
+
+## Environment Configuration
+
+Required environment variables:
+
+```bash
+# DataCite Credentials
+DATACITE_USERNAME=your_username
+DATACITE_PASSWORD=your_password
+
+# API Endpoints (environment-specific)
+DATACITE_API_URL=https://api.test.datacite.org          # Test environment
+DATACITE_SERVICE_URL=https://mds.test.datacite.org      # Test MDS
+
+DATACITE_API_URL=https://api.datacite.org               # Production
+DATACITE_SERVICE_URL=https://mds.datacite.org           # Production MDS
+
+# Project Configuration
+DATACITE_PREFIX=10.21388                                # Your DOI prefix
+BASE_DOMAIN=tethys.at                                   # Your domain
+```
+
+## Error Handling
+
+The command handles various error scenarios:
+
+- **Invalid modification dates**: Logs errors but continues processing other datasets
+- **DataCite API failures**: Falls back to MDS API, then to safe update
+- **Missing DOI identifiers**: Skips datasets without DOI identifiers
+- **Network issues**: Continues with next dataset after logging error
+
+## Integration
+
+The command integrates with:
+
+- **Dataset Model**: Uses `server_date_modified` for change detection
+- **DatasetIdentifier Model**: Reads DOI values and status
+- **OpenSearch Index**: Updates search index after DataCite update
+- **DoiClient**: Handles all DataCite API interactions
+
+## Common Workflows
+
+### Daily Maintenance
+```bash
+# Update any datasets modified today
+node ace update:datacite
+```
+
+### Pre-Deployment Check
+```bash
+# Check what would be updated before deployment
+node ace update:datacite --dry-run
+```
+
+### Debugging Sync Issues
+```bash
+# Investigate why specific dataset isn't syncing
+node ace update:datacite --stats --publish_id 231
+```
+
+### Full Resync
+```bash
+# Force update all DOI records (use with caution)
+node ace update:datacite --force
+```
+
+### Monitoring Report
+```bash
+# Generate sync status report
+node ace update:datacite --stats > datacite-sync-report.txt
+```
+
+## Best Practices
+
+1. **Regular Updates**: Run daily or after bulk dataset modifications
+2. **Test First**: Use `--dry-run` or `--stats` before bulk operations
+3. **Monitor Logs**: Check for data integrity warnings
+4. **Environment Separation**: Use correct API URLs for test vs production
+5. **Rate Limiting**: The command handles DataCite rate limits automatically

freshclam.conf

@@ -1,229 +1,47 @@
 ##
-## Example config file for freshclam
+## Container-optimized freshclam configuration
-## Please read the freshclam.conf(5) manual before editing this file.
 ##
 
-
+# Database directory
-# Comment or remove the line below.
-
-# Path to the database directory.
-# WARNING: It must match clamd.conf's directive!
-# Default: hardcoded (depends on installation options)
 DatabaseDirectory /var/lib/clamav
 
-# Path to the log file (make sure it has proper permissions)
+# Log to stdout for container logging
-# Default: disabled
 # UpdateLogFile /dev/stdout
 
-# Maximum size of the log file.
+# Basic logging settings
-# Value of 0 disables the limit.
-# You may use 'M' or 'm' for megabytes (1M = 1m = 1048576 bytes)
-# and 'K' or 'k' for kilobytes (1K = 1k = 1024 bytes).
-# in bytes just don't use modifiers. If LogFileMaxSize is enabled,
-# log rotation (the LogRotate option) will always be enabled.
-# Default: 1M
-#LogFileMaxSize 2M
-
-# Log time with each message.
-# Default: no
 LogTime yes
-
-# Enable verbose logging.
-# Default: no
 LogVerbose yes
-
-# Use system logger (can work together with UpdateLogFile).
-# Default: no
 LogSyslog no
 
-# Specify the type of syslog messages - please refer to 'man syslog'
+# PID file location
-# for facility names.
-# Default: LOG_LOCAL6
-#LogFacility LOG_MAIL
-
-# Enable log rotation. Always enabled when LogFileMaxSize is enabled.
-# Default: no
-#LogRotate yes
-
-# This option allows you to save the process identifier of the daemon
-# Default: disabled
-#PidFile /var/run/freshclam.pid
 PidFile /var/run/clamav/freshclam.pid
 
-# By default when started freshclam drops privileges and switches to the
+# Database owner
-# "clamav" user. This directive allows you to change the database owner.
-# Default: clamav (may depend on installation options)
 DatabaseOwner node
 
-# Use DNS to verify virus database version. Freshclam uses DNS TXT records
+# Mirror settings for Austria
-# to verify database and software versions. With this directive you can change
-# the database verification domain.
-# WARNING: Do not touch it unless you're configuring freshclam to use your
-# own database verification domain.
-# Default: current.cvd.clamav.net
-#DNSDatabaseInfo current.cvd.clamav.net
-
-# Uncomment the following line and replace XY with your country
-# code. See http://www.iana.org/cctld/cctld-whois.htm for the full list.
-# You can use db.XY.ipv6.clamav.net for IPv6 connections.
 DatabaseMirror db.at.clamav.net
-
-# database.clamav.net is a round-robin record which points to our most
-# reliable mirrors. It's used as a fall back in case db.XY.clamav.net is
-# not working. DO NOT TOUCH the following line unless you know what you
-# are doing.
 DatabaseMirror database.clamav.net
 
-# How many attempts to make before giving up.
-# Default: 3 (per mirror)
-#MaxAttempts 5
-
 # With this option you can control scripted updates. It's highly recommended
 # to keep it enabled.
 # Default: yes
-#ScriptedUpdates yes
+# Update settings
-
+ScriptedUpdates yes
-# By default freshclam will keep the local databases (.cld) uncompressed to
-# make their handling faster. With this option you can enable the compression;
-# the change will take effect with the next database update.
-# Default: no
-#CompressLocalDatabase no
-
-# With this option you can provide custom sources (http:// or file://) for
-# database files. This option can be used multiple times.
-# Default: no custom URLs
-#DatabaseCustomURL http://myserver.com/mysigs.ndb
-#DatabaseCustomURL file:///mnt/nfs/local.hdb
-
-# This option allows you to easily point freshclam to private mirrors.
-# If PrivateMirror is set, freshclam does not attempt to use DNS
-# to determine whether its databases are out-of-date, instead it will
-# use the If-Modified-Since request or directly check the headers of the
-# remote database files. For each database, freshclam first attempts
-# to download the CLD file. If that fails, it tries to download the
-# CVD file. This option overrides DatabaseMirror, DNSDatabaseInfo
-# and ScriptedUpdates. It can be used multiple times to provide
-# fall-back mirrors.
-# Default: disabled
-#PrivateMirror mirror1.mynetwork.com
-#PrivateMirror mirror2.mynetwork.com
 
 # Number of database checks per day.
 # Default: 12 (every two hours)
-#Checks 24
+Checks 12
 
-# Proxy settings
+# Don't fork (good for containers)
-# Default: disabled
-#HTTPProxyServer myproxy.com
-#HTTPProxyPort 1234
-#HTTPProxyUsername myusername
-#HTTPProxyPassword mypass
-
-# If your servers are behind a firewall/proxy which applies User-Agent
-# filtering you can use this option to force the use of a different
-# User-Agent header.
-# Default: clamav/version_number
-#HTTPUserAgent SomeUserAgentIdString
-
-# Use aaa.bbb.ccc.ddd as client address for downloading databases. Useful for
-# multi-homed systems.
-# Default: Use OS'es default outgoing IP address.
-#LocalIPAddress aaa.bbb.ccc.ddd
-
-# Send the RELOAD command to clamd.
-# Default: no
-#NotifyClamd /path/to/clamd.conf
-
-# Run command after successful database update.
-# Default: disabled
-#OnUpdateExecute command
-
-# Run command when database update process fails.
-# Default: disabled
-#OnErrorExecute command
-
-# Run command when freshclam reports outdated version.
-# In the command string %v will be replaced by the new version number.
-# Default: disabled
-#OnOutdatedExecute command
-
-# Don't fork into background.
-# Default: no
 Foreground no
 
-# Enable debug messages in libclamav.
+# Connection timeouts
-# Default: no
+ConnectTimeout 60
-#Debug yes
+ReceiveTimeout 60
 
-# Timeout in seconds when connecting to database server.
+# Test databases before using them
-# Default: 30
+TestDatabases yes
-#ConnectTimeout 60
 
-# Timeout in seconds when reading from database server.
+# Enable bytecode signatures
-# Default: 30
+Bytecode yes
-#ReceiveTimeout 60
-
-# With this option enabled, freshclam will attempt to load new
-# databases into memory to make sure they are properly handled
-# by libclamav before replacing the old ones.
-# Default: yes
-#TestDatabases yes
-
-# When enabled freshclam will submit statistics to the ClamAV Project about
-# the latest virus detections in your environment. The ClamAV maintainers
-# will then use this data to determine what types of malware are the most
-# detected in the field and in what geographic area they are.
-# Freshclam will connect to clamd in order to get recent statistics.
-# Default: no
-#SubmitDetectionStats /path/to/clamd.conf
-
-# Country of origin of malware/detection statistics (for statistical
-# purposes only). The statistics collector at ClamAV.net will look up
-# your IP address to determine the geographical origin of the malware
-# reported by your installation. If this installation is mainly used to
-# scan data which comes from a different location, please enable this
-# option and enter a two-letter code (see http://www.iana.org/domains/root/db/)
-# of the country of origin.
-# Default: disabled
-#DetectionStatsCountry country-code
-
-# This option enables support for our "Personal Statistics" service.
-# When this option is enabled, the information on malware detected by
-# your clamd installation is made available to you through our website.
-# To get your HostID, log on http://www.stats.clamav.net and add a new
-# host to your host list. Once you have the HostID, uncomment this option
-# and paste the HostID here. As soon as your freshclam starts submitting
-# information to our stats collecting service, you will be able to view
-# the statistics of this clamd installation by logging into
-# http://www.stats.clamav.net with the same credentials you used to
-# generate the HostID. For more information refer to:
-# http://www.clamav.net/documentation.html#cctts
-# This feature requires SubmitDetectionStats to be enabled.
-# Default: disabled
-#DetectionStatsHostID unique-id
-
-# This option enables support for Google Safe Browsing. When activated for
-# the first time, freshclam will download a new database file (safebrowsing.cvd)
-# which will be automatically loaded by clamd and clamscan during the next
-# reload, provided that the heuristic phishing detection is turned on. This
-# database includes information about websites that may be phishing sites or
-# possible sources of malware. When using this option, it's mandatory to run
-# freshclam at least every 30 minutes.
-# Freshclam uses the ClamAV's mirror infrastructure to distribute the
-# database and its updates but all the contents are provided under Google's
-# terms of use. See http://www.google.com/transparencyreport/safebrowsing
-# and http://www.clamav.net/documentation.html#safebrowsing
-# for more information.
-# Default: disabled
-#SafeBrowsing yes
-
-# This option enables downloading of bytecode.cvd, which includes additional
-# detection mechanisms and improvements to the ClamAV engine.
-# Default: enabled
-#Bytecode yes
-
-# Download an additional 3rd party signature database distributed through
-# the ClamAV mirrors.
-# This option can be used multiple times.
-#ExtraDatabase dbname1
-#ExtraDatabase dbname2

package.json

@@ -77,7 +77,7 @@
   "dependencies": {
     "@adonisjs/auth": "^9.2.4",
     "@adonisjs/bodyparser": "^10.0.1",
-    "@adonisjs/core": "^6.17.0",
+    "@adonisjs/core": "6.17.2",
     "@adonisjs/cors": "^2.2.1",
     "@adonisjs/drive": "^3.2.0",
     "@adonisjs/inertia": "^2.1.3",
@@ -97,7 +97,6 @@
     "@phc/format": "^1.0.0",
     "@poppinss/manager": "^5.0.2",
     "@vinejs/vine": "^3.0.0",
-    "argon2": "^0.43.0",
     "axios": "^1.7.9",
     "bcrypt": "^5.1.1",
     "bcryptjs": "^2.4.3",

providers/rule_provider.ts

@@ -0,0 +1,34 @@
+import { ApplicationService } from '@adonisjs/core/types';
+
+export default class RuleProvider {
+    constructor(protected app: ApplicationService) {}
+
+    public register() {
+        // Register your own bindings
+    }
+
+    public async boot() {
+        // IoC container is ready
+        // await import("../src/rules/index.js");
+
+        await import('#start/rules/unique');
+        await import('#start/rules/translated_language');
+        await import('#start/rules/unique_person');
+        // () => import('#start/rules/file_length'),
+        // () => import('#start/rules/file_scan'),
+        // () => import('#start/rules/allowed_extensions_mimetypes'),
+        await import('#start/rules/dependent_array_min_length');
+        await import('#start/rules/referenceValidation');
+        await import('#start/rules/valid_mimetype');
+        await import('#start/rules/array_contains_types');
+        await import('#start/rules/orcid');
+    }
+
+    public async ready() {
+        // App is ready
+    }
+
+    public async shutdown() {
+        // Cleanup, since app is going down
+    }
+}

providers/vinejs_provider.ts

@@ -6,17 +6,16 @@
 import type { ApplicationService } from '@adonisjs/core/types';
 import vine, { symbols, BaseLiteralType, Vine } from '@vinejs/vine';
 import type { FieldContext, FieldOptions } from '@vinejs/vine/types';
-// import type { MultipartFile, FileValidationOptions } from '@adonisjs/bodyparser/types';
 import type { MultipartFile } from '@adonisjs/core/bodyparser';
 import type { FileValidationOptions } from '@adonisjs/core/types/bodyparser';
 import { Request, RequestValidator } from '@adonisjs/core/http';
 import MimeType from '#models/mime_type';
 
-
 /**
  * Validation options accepted by the "file" rule
  */
 export type FileRuleValidationOptions = Partial<FileValidationOptions> | ((field: FieldContext) => Partial<FileValidationOptions>);
+
 /**
  * Extend VineJS
  */
@@ -25,6 +24,7 @@ declare module '@vinejs/vine' {
         myfile(options?: FileRuleValidationOptions): VineMultipartFile;
     }
 }
+
 /**
  * Extend HTTP request class
  */
@@ -36,19 +36,54 @@ declare module '@adonisjs/core/http' {
  * Checks if the value is an instance of multipart file
  * from bodyparser.
  */
-export function isBodyParserFile(file: MultipartFile | unknown): boolean {
+export function isBodyParserFile(file: MultipartFile | unknown): file is MultipartFile {
     return !!(file && typeof file === 'object' && 'isMultipartFile' in file);
 }
-export async function getEnabledExtensions() {
-    const enabledExtensions = await MimeType.query().select('file_extension').where('enabled', true).exec();
-    const extensions = enabledExtensions
-        .map((extension) => {
-            return extension.file_extension.split('|');
-        })
-        .flat();
 
-    return extensions;
+/**
+ * Cache for enabled extensions to reduce database queries
+ */
+let extensionsCache: string[] | null = null;
+let cacheTimestamp = 0;
+const CACHE_DURATION = 5 * 60 * 1000; // 5 minutes
+
+/**
+ * Get enabled extensions with caching
+ */
+export async function getEnabledExtensions(): Promise<string[]> {
+    const now = Date.now();
+
+    if (extensionsCache && now - cacheTimestamp < CACHE_DURATION) {
+        return extensionsCache;
+    }
+
+    try {
+        const enabledExtensions = await MimeType.query().select('file_extension').where('enabled', true).exec();
+
+        const extensions = enabledExtensions
+            .map((extension) => extension.file_extension.split('|'))
+            .flat()
+            .map((ext) => ext.toLowerCase().trim())
+            .filter((ext) => ext.length > 0);
+
+        extensionsCache = [...new Set(extensions)]; // Remove duplicates
+        cacheTimestamp = now;
+
+        return extensionsCache;
+    } catch (error) {
+        console.error('Error fetching enabled extensions:', error);
+        return extensionsCache || [];
+    }
 }
+
+/**
+ * Clear extensions cache
+ */
+export function clearExtensionsCache(): void {
+    extensionsCache = null;
+    cacheTimestamp = 0;
+}
+
 /**
  * VineJS validation rule that validates the file to be an
  * instance of BodyParser MultipartFile class.
@@ -65,6 +100,7 @@ const isMultipartFile = vine.createRule(async (file: MultipartFile | unknown, op
     // At this point, you can use type assertion to explicitly tell TypeScript that file is of type MultipartFile
     const validatedFile = file as MultipartFile;
     const validationOptions = typeof options === 'function' ? options(field) : options;
+    
     /**
      * Set size when it's defined in the options and missing
      * on the file instance
@@ -72,30 +108,29 @@ const isMultipartFile = vine.createRule(async (file: MultipartFile | unknown, op
     if (validatedFile.sizeLimit === undefined && validationOptions.size) {
         validatedFile.sizeLimit = validationOptions.size;
     }
+
     /**
      * Set extensions when it's defined in the options and missing
      * on the file instance
      */
-    // if (validatedFile.allowedExtensions === undefined && validationOptions.extnames) {
+    if (validatedFile.allowedExtensions === undefined) {
-    //     validatedFile.allowedExtensions = validationOptions.extnames;
+        if (validationOptions.extnames !== undefined) {
-    // }
+            validatedFile.allowedExtensions = validationOptions.extnames;
-    if (validatedFile.allowedExtensions === undefined && validationOptions.extnames !== undefined) {
+        } else {
-        validatedFile.allowedExtensions = validationOptions.extnames; // await getEnabledExtensions();
+            validatedFile.allowedExtensions = await getEnabledExtensions();
-    } else if (validatedFile.allowedExtensions === undefined && validationOptions.extnames === undefined) {
+        }
-        validatedFile.allowedExtensions = await getEnabledExtensions();
     }
-    /**
+
-     * wieder löschen
-     * Set extensions when it's defined in the options and missing
-     * on the file instance
-     */
-    //  if (file.clientNameSizeLimit === undefined && validationOptions.clientNameSizeLimit) {
-    //     file.clientNameSizeLimit = validationOptions.clientNameSizeLimit;
-    // }
     /**
      * Validate file
      */
-    validatedFile.validate();
+    try {
+        validatedFile.validate();
+    } catch (error) {
+        field.report(`File validation failed: ${error.message}`, 'file.validation_error', field, validationOptions);
+        return;
+    }
+
     /**
      * Report errors
      */
@@ -107,36 +142,37 @@ const isMultipartFile = vine.createRule(async (file: MultipartFile | unknown, op
 const MULTIPART_FILE: typeof symbols.SUBTYPE = symbols.SUBTYPE;
 
 export class VineMultipartFile extends BaseLiteralType<MultipartFile, MultipartFile, MultipartFile> {
-        
     [MULTIPART_FILE]: string;
-    // constructor(validationOptions?: FileRuleValidationOptions, options?: FieldOptions) {
+    public validationOptions?: FileRuleValidationOptions;
-    //     super(options, [isMultipartFile(validationOptions || {})]);
-    //     this.validationOptions = validationOptions;
-    //     this.#private = true;
-    // }
-
-    // clone(): this {
-    //     return new VineMultipartFile(this.validationOptions, this.cloneOptions()) as this;
-    // }
-    // #private;
-    // constructor(validationOptions?: FileRuleValidationOptions, options?: FieldOptions, validations?: Validation<any>[]);
-    // clone(): this;
-
-    public validationOptions;
     // extnames: (18) ['gpkg', 'htm', 'html', 'csv', 'txt', 'asc', 'c', 'cc', 'h', 'srt', 'tiff', 'pdf', 'png', 'zip', 'jpg', 'jpeg', 'jpe', 'xlsx']
     // size: '512mb'
 
-    // public constructor(validationOptions?: FileRuleValidationOptions, options?: FieldOptions, validations?: Validation<any>[]) {
     public constructor(validationOptions?: FileRuleValidationOptions, options?: FieldOptions) {
-        // super(options, validations);
         super(options, [isMultipartFile(validationOptions || {})]);
         this.validationOptions = validationOptions;
     }
 
     public clone(): any {
-        // return new VineMultipartFile(this.validationOptions, this.cloneOptions(), this.cloneValidations());
         return new VineMultipartFile(this.validationOptions, this.cloneOptions());
     }
+
+    /**
+     * Set maximum file size
+     */
+    public maxSize(size: string | number): this {
+        const newOptions = { ...this.validationOptions, size };
+        return new VineMultipartFile(newOptions, this.cloneOptions()) as this;
+    }
+
+    /**
+     * Set allowed extensions
+     */
+    public extensions(extnames: string[]): this {
+        const newOptions = { ...this.validationOptions, extnames };
+        return new VineMultipartFile(newOptions, this.cloneOptions()) as this;
+    }
+
+  
 }
 
 export default class VinejsProvider {
@@ -155,13 +191,8 @@ export default class VinejsProvider {
     /**
      * The container bindings have booted
      */
-
     boot(): void {
-        //   VineString.macro('translatedLanguage', function (this: VineString, options: Options) {
+        Vine.macro('myfile', function (this: Vine, options?: FileRuleValidationOptions) {
-        //     return this.use(translatedLanguageRule(options));
-        // });
-
-        Vine.macro('myfile', function (this: Vine, options) {
             return new VineMultipartFile(options);
         });
 
@@ -175,6 +206,41 @@ export default class VinejsProvider {
             }
             return new RequestValidator(this.ctx).validateUsing(...args);
         });
+
+        // Ensure MIME validation macros are loaded
+        this.loadMimeValidationMacros();
+        this.loadFileScanMacros();
+        this.loadFileLengthMacros();
+    }
+
+    /**
+     * Load MIME validation macros - called during boot to ensure they're available
+     */
+    private async loadMimeValidationMacros(): Promise<void> {
+        try {
+            // Dynamically import the MIME validation rule to ensure macros are registered
+            await import('#start/rules/allowed_extensions_mimetypes');
+        } catch (error) {
+            console.warn('Could not load MIME validation macros:', error);
+        }
+    }
+
+    private async loadFileScanMacros(): Promise<void> {
+        try {
+            // Dynamically import the MIME validation rule to ensure macros are registered
+            await import('#start/rules/file_scan');
+        } catch (error) {
+            console.warn('Could not load MIME validation macros:', error);
+        }
+    }
+
+    private async loadFileLengthMacros(): Promise<void> {
+        try {
+            // Dynamically import the MIME validation rule to ensure macros are registered
+            await import('#start/rules/file_length');
+        } catch (error) {
+            console.warn('Could not load MIME validation macros:', error);
+        }
     }
 
     /**
@@ -190,5 +256,7 @@ export default class VinejsProvider {
     /**
      * Preparing to shutdown the app
      */
-    async shutdown() {}
+    async shutdown() {
+        clearExtensionsCache();
+    }
 }

public/assets2/solr.xslt

@@ -111,7 +111,14 @@
         <!--5 server_date_modified -->
         <xsl:if test="ServerDateModified/@UnixTimestamp != ''">            
             <xsl:text>"server_date_modified": "</xsl:text>             
-            <xsl:value-of select="/ServerDateModified/@UnixTimestamp" />    
+            <xsl:value-of select="ServerDateModified/@UnixTimestamp" />    
+            <xsl:text>",</xsl:text>         
+        </xsl:if>
+        
+        <!--5 embargo_date -->
+        <xsl:if test="EmbargoDate/@UnixTimestamp != ''">            
+            <xsl:text>"embargo_date": "</xsl:text>             
+            <xsl:value-of select="EmbargoDate/@UnixTimestamp" />    
             <xsl:text>",</xsl:text>         
         </xsl:if>
         
@@ -200,7 +207,8 @@
         
         <!--17 +18 uncontrolled subject (swd) -->    
         <xsl:variable name="subjects">
-            <xsl:for-each select="Subject[@Type = 'Uncontrolled']">
+            <!-- <xsl:for-each select="Subject[@Type = 'Uncontrolled']"> -->
+            <xsl:for-each select="Subject[@Type = 'Uncontrolled' or @Type = 'Geoera']">
                 <xsl:text>"</xsl:text>
                 <xsl:value-of select="fn:escapeQuotes(@Value)"/>
                 <xsl:text>"</xsl:text>

readme.md

@@ -11,6 +11,8 @@ Welcome to the Tethys Research Repository Backend System! This is the backend co
 -   [Configuration](#configuration)
 -   [Database](#database)
 -   [API Documentation](#api-documentation)
+-   [Commands](#commands)
+-   [Documentation](#documentation)
 -   [Contributing](#contributing)
 -   [License](#license)
 
@@ -29,5 +31,175 @@ Before you begin, ensure you have met the following requirements:
 1. Clone this repository:
 
     ```bash
-    git clone https://gitea.geologie.ac.at/geolba/tethys.backend.git
+    git clone git clone https://gitea.geologie.ac.at/geolba/tethys.backend.git
+    cd tethys-backend
     ```
+
+2. Install dependencies:
+
+    ```bash
+    npm install
+    ```
+
+3. Configure environment variables (see [Configuration](#configuration))
+
+4. Run database migrations:
+
+    ```bash
+    node ace migration:run
+    ```
+
+5. Start the development server:
+
+    ```bash
+    npm run dev
+    ```
+
+## Usage
+
+The Tethys Backend provides RESTful APIs for managing research datasets, user authentication, DOI registration, and search functionality.
+
+## Configuration
+
+Copy the `.env.example` file to `.env` and configure the following variables:
+
+### Database Configuration
+```bash
+DB_CONNECTION=pg
+DB_HOST=localhost
+DB_PORT=5432
+DB_USER=your_username
+DB_PASSWORD=your_password
+DB_DATABASE=tethys_db
+```
+
+### DataCite Configuration
+```bash
+# DataCite Credentials
+DATACITE_USERNAME=your_datacite_username
+DATACITE_PASSWORD=your_datacite_password
+DATACITE_PREFIX=10.21388
+
+# Environment-specific API endpoints
+DATACITE_API_URL=https://api.test.datacite.org      # Test environment
+DATACITE_SERVICE_URL=https://mds.test.datacite.org  # Test MDS
+
+# For production:
+# DATACITE_API_URL=https://api.datacite.org
+# DATACITE_SERVICE_URL=https://mds.datacite.org
+```
+
+### OpenSearch Configuration
+```bash
+OPENSEARCH_HOST=localhost:9200
+```
+
+### Application Configuration
+```bash
+BASE_DOMAIN=tethys.at
+APP_KEY=your_app_key
+```
+
+## Database
+
+The system uses PostgreSQL with Lucid ORM. Key models include:
+
+- **Dataset**: Research dataset metadata
+- **DatasetIdentifier**: DOI and other identifiers for datasets
+- **User**: User management and authentication
+- **XmlCache**: Cached XML metadata
+
+Run migrations and seeders:
+
+```bash
+# Run migrations
+node ace migration:run
+
+# Run seeders (if available)
+node ace db:seed
+```
+
+## API Documentation
+
+API endpoints are available for:
+
+- Dataset management (`/api/datasets`)
+- User authentication (`/api/auth`)
+- DOI registration (`/api/doi`)
+- Search functionality (`/api/search`)
+
+*Detailed API documentation can be found in the `/docs/api` directory.*
+
+## Commands
+
+The system includes several Ace commands for maintenance and data management:
+
+### Dataset Indexing
+```bash
+# Index all published datasets to OpenSearch
+node ace index:datasets
+
+# Index a specific dataset
+node ace index:datasets --publish_id 123
+```
+
+### DataCite DOI Management
+```bash
+# Update DataCite records for modified datasets
+node ace update:datacite
+
+# Show detailed statistics for datasets needing updates
+node ace update:datacite --stats
+
+# Preview what would be updated (dry run)
+node ace update:datacite --dry-run
+
+# Force update all DOI records
+node ace update:datacite --force
+
+# Update a specific dataset
+node ace update:datacite --publish_id 123
+```
+
+*For detailed command documentation, see the [Commands Documentation](docs/commands/)*
+
+## Documentation
+
+Comprehensive documentation is available in the `/docs` directory:
+
+- **[Commands Documentation](docs/commands/)** - Detailed guides for Ace commands
+  - [DataCite Update Command](docs/commands/update-datacite.md) - DOI synchronization and management
+  - [Dataset Indexing Command](docs/commands/index-datasets.md) - Search index management
+- **[API Documentation](docs/api/)** - REST API endpoints and usage
+- **[Deployment Guide](docs/deployment/)** - Production deployment instructions
+- **[Configuration Guide](docs/configuration/)** - Environment setup and configuration options
+
+## Contributing
+
+1. Fork the repository
+2. Create a feature branch (`git checkout -b feature/amazing-feature`)
+3. Commit your changes (`git commit -m 'Add some amazing feature'`)
+4. Push to the branch (`git push origin feature/amazing-feature`)
+5. Open a Pull Request
+
+### Development Guidelines
+
+- Follow the existing code style and conventions
+- Write tests for new features
+- Update documentation for any API changes
+- Ensure all commands and migrations work properly
+
+### Testing Commands
+
+```bash
+# Run tests
+npm test
+
+# Test specific commands
+node ace update:datacite --dry-run --publish_id 123
+node ace index:datasets --publish_id 123
+```
+
+## License
+
+This project is licensed under the [MIT License](LICENSE).

resources/js/Components/BaseButton.vue

@@ -1,5 +1,5 @@
-<script setup>
+<script lang="ts" setup>
-import { computed } from 'vue';
+import { computed, PropType } from 'vue';
 import { Link } from '@inertiajs/vue3';
 // import { Link } from '@inertiajs/inertia-vue3';
 import { getButtonColor } from '@/colors';
@@ -30,8 +30,8 @@ const props = defineProps({
         type: String,
         default: null,
     },
-    color: {
+     color: {
-        type: String,
+        type: String as PropType<'white' | 'contrast' | 'light' | 'success' | 'danger' | 'warning' | 'info' | 'modern'>,
         default: 'white',
     },
     as: {
@@ -45,11 +45,18 @@ const props = defineProps({
     roundedFull: Boolean,
 });
 
+const emit = defineEmits(['click']);
+
 const is = computed(() => {
     if (props.as) {
         return props.as;
     }
 
+    // If disabled, always render as button or span to prevent navigation
+    if (props.disabled) {
+        return props.routeName || props.href ? 'span' : 'button';
+    }
+
     if (props.routeName) {
         return Link;
     }
@@ -69,47 +76,105 @@ const computedType = computed(() => {
     return null;
 });
 
+// Only provide href/routeName when not disabled
+const computedHref = computed(() => {
+    if (props.disabled) return null;
+    return props.routeName || props.href;
+});
+
+// Only provide target when not disabled and has href
+const computedTarget = computed(() => {
+    if (props.disabled || !props.href) return null;
+    return props.target;
+});
+
+// Only provide disabled attribute for actual button elements
+const computedDisabled = computed(() => {
+    if (is.value === 'button') {
+        return props.disabled;
+    }
+    return null;
+});
+
 const labelClass = computed(() => (props.small && props.icon ? 'px-1' : 'px-2'));
 
 const componentClass = computed(() => {
     const base = [
         'inline-flex',
-        'cursor-pointer',
         'justify-center',
         'items-center',
         'whitespace-nowrap',
         'focus:outline-none',
         'transition-colors',
-        'focus:ring-2',
         'duration-150',
         'border',
         props.roundedFull ? 'rounded-full' : 'rounded',
-        props.active ? 'ring ring-black dark:ring-white' : 'ring-blue-700',
-        getButtonColor(props.color, props.outline, !props.disabled),
     ];
 
+    // Only add focus ring styles when not disabled
+    if (!props.disabled) {
+        base.push('focus:ring-2');
+        base.push(props.active ? 'ring ring-black dark:ring-white' : 'ring-blue-700');
+    }
+
+    // Add button colors
+     // Add button colors - handle both string and array returns
+    // const buttonColors = getButtonColor(props.color, props.outline, !props.disabled);
+    base.push(getButtonColor(props.color, props.outline, !props.disabled));
+    //  if (Array.isArray(buttonColors)) {
+    //     base.push(...buttonColors);
+    // } else {
+    //     base.push(buttonColors);
+    // }
+
+    // Add size classes
     if (props.small) {
         base.push('text-sm', props.roundedFull ? 'px-3 py-1' : 'p-1');
     } else {
         base.push('py-2', props.roundedFull ? 'px-6' : 'px-3');
     }
 
+    // Add disabled/enabled specific classes
     if (props.disabled) {
-        base.push('cursor-not-allowed', props.outline ? 'opacity-50' : 'opacity-70');
+        base.push(
+            'cursor-not-allowed',
+            'opacity-60',
+            'pointer-events-none', // This prevents all interactions
+        );
+    } else {
+        base.push('cursor-pointer');
+        // Add hover effects only when not disabled
+        if (is.value === 'button' || is.value === 'a' || is.value === Link) {
+            base.push('hover:opacity-80');
+        }
     }
 
     return base;
 });
+
+// Handle click events with disabled check
+const handleClick = (event) => {
+    if (props.disabled) {
+        event.preventDefault();
+        event.stopPropagation();
+        return;
+    }
+    emit('click', event);
+};
 </script>
 
 <template>
     <component
         :is="is"
         :class="componentClass"
-        :href="routeName ? routeName : href"
+        :href="computedHref"
+        :to="props.disabled ? null : props.routeName"
         :type="computedType"
-        :target="target"
+        :target="computedTarget"
-        :disabled="disabled"
+        :disabled="computedDisabled"
+        :tabindex="props.disabled ? -1 : null"
+        :aria-disabled="props.disabled ? 'true' : null"
+        @click="handleClick"
     >
         <BaseIcon v-if="icon" :path="icon" />
         <span v-if="label" :class="labelClass">{{ label }}</span>

resources/js/Components/FormCheckRadio.vue

@@ -1,5 +1,5 @@
 <script setup lang="ts">
-import { computed } from 'vue';
+import { computed, watch, ref } from 'vue';
 
 interface Props {
     name: string;
@@ -13,32 +13,138 @@ const props = defineProps<Props>();
 
 const emit = defineEmits<{ (e: 'update:modelValue', value: Props['modelValue']): void }>();
 
+// const computedValue = computed({
+//     get: () => props.modelValue,
+//     set: (value) => {
+//         emit('update:modelValue', props.type === 'radio' ? [value] : value);
+//     },
+// });
 const computedValue = computed({
-    get: () => props.modelValue,
+    get: () => {
-    set: (value) => {
+        if (props.type === 'radio') {
-        emit('update:modelValue', props.type === 'radio' ? [value] : value);
+            // For radio buttons, return boolean indicating if this option is selected
+            if (Array.isArray(props.modelValue)) {
+                return props.modelValue;
+            }
+            return [props.modelValue];
+        } else {
+            // For checkboxes, return boolean indicating if this option is included
+            if (Array.isArray(props.modelValue)) {
+                return props.modelValue.includes(props.inputValue);
+            }
+            return props.modelValue == props.inputValue;
+        }
     },
+    set: (value: boolean) => {
+        if (props.type === 'radio') {
+            // When radio is selected, emit the new value as array
+            emit('update:modelValue', [value]);
+        } else {
+            // Handle checkboxes
+            let updatedValue = Array.isArray(props.modelValue) ? [...props.modelValue] : [];
+            if (value) {
+                if (!updatedValue.includes(props.inputValue)) {
+                    updatedValue.push(props.inputValue);
+                }
+            } else {
+                updatedValue = updatedValue.filter(item => item != props.inputValue);
+            }
+            emit('update:modelValue', updatedValue);
+        }
+    
+    }
 });
 
 const inputType = computed(() => (props.type === 'radio' ? 'radio' : 'checkbox'));
 
 // Define isChecked for radio inputs: it's true when the current modelValue equals the inputValue
-const isChecked = computed(() => {
+// const isChecked = computed(() => {
-    if (Array.isArray(computedValue.value) && computedValue.value.length > 0) {
+//     if (Array.isArray(computedValue.value) && computedValue.value.length > 0) {
-        return props.type === 'radio' 
+//         return props.type === 'radio' 
-            ? computedValue.value[0] === props.inputValue
+//             ? computedValue.value[0] === props.inputValue
-            : computedValue.value.includes(props.inputValue);
+//             : computedValue.value.includes(props.inputValue);
+//     }
+//     return computedValue.value === props.inputValue;
+// });
+// const isChecked = computed(() => {
+//     return computedValue.value[0] === props.inputValue;
+// });
+// Fix the isChecked computation with proper type handling
+// const isChecked = computed(() => {
+//     if (props.type === 'radio') {
+//         // Use loose equality to handle string/number conversion
+//         return computedValue.value == props.inputValue;
+//     }
+//     return computedValue.value === true;
+// });
+
+// const isChecked = computed(() => {
+//     if (props.type === 'radio') {
+//         if (Array.isArray(props.modelValue)) {
+//             return props.modelValue.length > 0 && props.modelValue[0] == props.inputValue;
+//         }
+//         return props.modelValue == props.inputValue;
+//     }
+    
+//     // For checkboxes
+//     if (Array.isArray(props.modelValue)) {
+//         return props.modelValue.includes(props.inputValue);
+//     }
+//     return props.modelValue == props.inputValue;
+// });
+// Use a ref for isChecked and update it with a watcher
+const isChecked = ref(false);
+// Calculate initial isChecked value
+const calculateIsChecked = () => {
+    if (props.type === 'radio') {
+        if (Array.isArray(props.modelValue)) {
+            return props.modelValue.length > 0 && props.modelValue[0] == props.inputValue;
+        }
+        return props.modelValue == props.inputValue;
     }
-    return computedValue.value === props.inputValue;
+    
-});
+    // For checkboxes
+    if (Array.isArray(props.modelValue)) {
+        return props.modelValue.includes(props.inputValue);
+    }
+    return props.modelValue == props.inputValue;
+};
+
+// Set initial value
+isChecked.value = calculateIsChecked();
+
+// Watch for changes in modelValue and recalculate isChecked
+watch(
+    () => props.modelValue,
+    (newValue) => {
+        console.log('modelValue changed:', {
+            newValue,
+            inputValue: props.inputValue,
+            type: props.type
+        });
+        isChecked.value = calculateIsChecked();
+    },
+    { immediate: true, deep: true }
+);
+
+// Also watch inputValue in case it changes
+watch(
+    () => props.inputValue,
+    () => {
+        isChecked.value = calculateIsChecked();
+    }
+);
 </script>
 
 <template>
-    <label v-if="type === 'radio'" :class="[type]"
+     <label v-if="type === 'radio'" :class="[type]"
         class="mr-6 mb-3 last:mr-0 inline-flex items-center cursor-pointer relative">
-        <input v-model="computedValue" :type="inputType" :name="name" :value="inputValue"
+        <input 
-            class="absolute left-0 opacity-0 -z-1 focus:outline-none focus:ring-0"
+            v-model="computedValue" 
-            :checked="isChecked" />
+            :type="inputType" 
+            :name="name" 
+            :value="inputValue"
+            class="absolute left-0 opacity-0 -z-1 focus:outline-none focus:ring-0" />
         <span class="check border transition-colors duration-200 dark:bg-slate-800 block w-5 h-5 rounded-full" :class="{
             'border-gray-700': !isChecked,
             'bg-radio-checked bg-no-repeat bg-center bg-lime-600 border-lime-600 border-4': isChecked

resources/js/Components/FormCheckRadioGroup.vue

@@ -38,32 +38,82 @@ const props = defineProps({
     },
 });
 const emit = defineEmits(['update:modelValue']);
-const computedValue = computed({
+// const computedValue = computed({
-    // get: () => props.modelValue,
+//     // get: () => props.modelValue,
-    get: () => {
+//     get: () => {
-        // const ids = props.modelValue.map((obj) => obj.id);
+//         // const ids = props.modelValue.map((obj) => obj.id);
-        // return ids;
+//         // return ids;
-        if (Array.isArray(props.modelValue)) {
+//         if (Array.isArray(props.modelValue)) {
-            if (props.modelValue.every((item) => typeof item === 'number')) {
+//             if (props.modelValue.every((item) => typeof item === 'number')) {
-                return props.modelValue;
+//                 return props.modelValue;
-            } else if (props.modelValue.every((item) => hasIdAttribute(item))) {
+//             } else if (props.modelValue.every((item) => hasIdAttribute(item))) {
-                const ids = props.modelValue.map((obj) => obj.id);
+//                 const ids = props.modelValue.map((obj) => obj.id);
-                return ids;
+//                 return ids;
-            }
+//             }
-            return props.modelValue;
+//             return props.modelValue;
-        }
+//         }
-        // return props.modelValue;
+//         // return props.modelValue;
-    },
+//     },
-    set: (value) => {
+//     set: (value) => {
-        emit('update:modelValue', value);
+//         emit('update:modelValue', value);
-    },
+//     },
-});
+// });
 
 // Define a type guard to check if an object has an 'id' attribute
 // function hasIdAttribute(obj: any): obj is { id: any } {
 //   return typeof obj === 'object' && 'id' in obj;
 // }
 
+const computedValue = computed({
+    get: () => {
+        if (!props.modelValue) return props.modelValue;
+        
+        if (Array.isArray(props.modelValue)) {
+            // Handle empty array
+            if (props.modelValue.length === 0) return [];
+            
+            // If all items are objects with id property
+            if (props.modelValue.every((item) => hasIdAttribute(item))) {
+                return props.modelValue.map((obj) => {
+                    // Ensure we return the correct type based on the options keys
+                    const id = obj.id;
+                    // Check if options keys are numbers or strings
+                    const optionKeys = Object.keys(props.options);
+                    if (optionKeys.length > 0) {
+                        // If option keys are numeric strings, return number
+                        if (optionKeys.every(key => !isNaN(Number(key)))) {
+                            return Number(id);
+                        }
+                    }
+                    return String(id);
+                });
+            }
+            
+            // If all items are numbers
+            if (props.modelValue.every((item) => typeof item === 'number')) {
+                return props.modelValue;
+            }
+            
+            // If all items are strings that represent numbers
+            if (props.modelValue.every((item) => typeof item === 'string' && !isNaN(Number(item)))) {
+                // Convert to numbers if options keys are numeric
+                const optionKeys = Object.keys(props.options);
+                if (optionKeys.length > 0 && optionKeys.every(key => !isNaN(Number(key)))) {
+                    return props.modelValue.map(item => Number(item));
+                }
+                return props.modelValue;
+            }
+            
+            // Return as-is for other cases
+            return props.modelValue;
+        }
+        
+        return props.modelValue;
+    },
+    set: (value) => {
+        emit('update:modelValue', value);
+    },
+});
 const hasIdAttribute = (obj: any): obj is { id: any } => {
     return typeof obj === 'object' && 'id' in obj;
 };
@@ -110,7 +160,7 @@ const inputElClass = computed(() => {
         </div>
         <!-- <FormCheckRadio v-for="(value, key) in options" :key="key" v-model="computedValue" :type="type"
             :name="name" :input-value="key" :label="value" :class="componentClass" /> -->
-             <FormCheckRadio v-for="(value, key) in options" :key="key" v-model="computedValue" :type="type"
+             <FormCheckRadio v-for="(value, key) in options" key="`${name}-${key}-${JSON.stringify(computedValue)}`"  v-model="computedValue" :type="type"
             :name="name" :input-value="isNaN(Number(key)) ? key : Number(key)" :label="value" :class="componentClass" />
     </div>
 </template>

resources/js/Components/Map/MapOptions.ts

@@ -1,7 +1,11 @@
-import type { LatLngBoundsExpression } from 'leaflet/src/geo/LatLngBounds';
+// import type { LatLngBoundsExpression } from 'leaflet/src/geo/LatLngBounds';
-import type { LatLngExpression } from 'leaflet/src/geo/LatLng';
+// import type { LatLngExpression } from 'leaflet/src/geo/LatLng';
-import type { Layer } from 'leaflet/src/layer/Layer';
+// import type { Layer } from 'leaflet/src/layer/Layer';
-import type { CRS } from 'leaflet/src/geo/crs/CRS';
+// import type { CRS } from 'leaflet/src/geo/crs/CRS';
+import type { LatLngBoundsExpression } from 'leaflet';
+import type { LatLngExpression } from 'leaflet';
+import type { Layer } from 'leaflet';
+import type { CRS } from 'leaflet';
 
 export interface MapOptions {
     preferCanvas?: boolean | undefined;

resources/js/Components/Map/SearchMap.vue

@@ -8,7 +8,6 @@ import { svg } from 'leaflet/src/layer/vector/SVG';
 import axios from 'axios';
 import { LatLngBoundsExpression } from 'leaflet/src/geo/LatLngBounds';
 import { tileLayerWMS } from 'leaflet/src/layer/tile/TileLayer.WMS';
-// import { TileLayer } from 'leaflet/src/layer/tile/TileLayer';
 import { Attribution } from 'leaflet/src/control/Control.Attribution';
 import DrawControlComponent from '@/Components/Map/draw.component.vue';
 import ZoomControlComponent from '@/Components/Map/zoom.component.vue';
@@ -17,14 +16,7 @@ import { LayerGroup } from 'leaflet/src/layer/LayerGroup';
 import { OpensearchDocument } from '@/Dataset';
 
 Map.include({
-    // @namespace Map; @method getRenderer(layer: Path): Renderer
-    // Returns the instance of `Renderer` that should be used to render the given
-    // `Path`. It will ensure that the `renderer` options of the map and paths
-    // are respected, and that the renderers do exist on the map.
     getRenderer: function (layer) {
-        // @namespace Path; @option renderer: Renderer
-        // Use this specific instance of `Renderer` for this path. Takes
-        // precedence over the map's [default renderer](#map-renderer).
         var renderer = layer.options.renderer || this._getPaneRenderer(layer.options.pane) || this.options.renderer || this._renderer;
 
         if (!renderer) {
@@ -51,21 +43,18 @@ Map.include({
     },
 
     _createRenderer: function (options) {
-        // @namespace Map; @option preferCanvas: Boolean = false
-        // Whether `Path`s should be rendered on a `Canvas` renderer.
-        // By default, all `Path`s are rendered in a `SVG` renderer.
         return (this.options.preferCanvas && canvas(options)) || svg(options);
     },
 });
+
 const DEFAULT_BASE_LAYER_NAME = 'BaseLayer';
 const DEFAULT_BASE_LAYER_ATTRIBUTION = '&copy; <a target="_blank" href="http://osm.org/copyright">OpenStreetMap</a> contributors';
 const OPENSEARCH_HOST = 'https://catalog.geosphere.at';
-// const OPENSEARCH_HOST = `${process.env.OPENSEARCH_HOST}`;
+
-// const OPENSEARCH_HOST = `http://${process.env.OPENSEARCH_PUBLIC_HOST}`;
 let map: Map;
 
 const props = defineProps({
-    dheckable: Boolean,
+    checkable: Boolean,
     datasets: {
         type: Array<OpensearchDocument>,
         default: () => [],
@@ -89,10 +78,7 @@ const items = computed({
     get() {
         return props.datasets;
     },
-    // setter
     set(value) {
-        // Note: we are using destructuring assignment syntax here.
-
         props.datasets.length = 0;
         props.datasets.push(...value);
     },
@@ -103,15 +89,13 @@ const fitBounds: LatLngBoundsExpression = [
     [49.0390742051, 16.9796667823],
 ];
 
-// const mapId = 'map';
 const drawControl: Ref<DrawControlComponent | null> = ref(null);
 const southWest = ref(null);
 const northEast = ref(null);
 const mapService = MapService();
+const isLoading = ref(false);
 
 const filterLayerGroup = new LayerGroup();
-// Replace with your actual data
-// const datasets: Ref<OpensearchDocument[]> = ref([]);
 
 onMounted(() => {
     initMap();
@@ -122,7 +106,6 @@ onUnmounted(() => {
 });
 
 const initMap = async () => {
-    // init leaflet map
     map = new Map('map', props.mapOptions);
     mapService.setMap(props.mapId, map);
     map.scrollWheelZoom.disable();
@@ -140,11 +123,6 @@ const initMap = async () => {
         layers: 'OSM-WMS',
     });
 
-    // let baseAt = new TileLayer('https://{s}.wien.gv.at/basemap/bmapgrau/normal/google3857/{z}/{y}/{x}.png', {
-    //     subdomains: ['maps', 'maps1', 'maps2', 'maps3', 'maps4'],
-    //     attribution: DEFAULT_BASE_LAYER_ATTRIBUTION,
-    // });
-
     let layerOptions = {
         label: DEFAULT_BASE_LAYER_NAME,
         visible: true,
@@ -153,62 +131,15 @@ const initMap = async () => {
     layerOptions.layer.addTo(map);
 
     map.on('Draw.Event.CREATED', handleDrawEventCreated);
-
-    // // const query = {
-    // // 	query: {
-    // // 		term: {
-    // // 			id: "103"
-    // // 		}
-    // // 	}
-    // // };
-    // // to do : call extra method:
-    // const query = {
-    // 	// q: 'id:103'
-    // 	// q: 'author:"Iglseder, Christoph" OR title:"Datensatz"',
-    // 	// q: 'author:"Iglseder"',
-    // 	q: '*',
-    // 	_source: 'author,bbox_xmin,bbox_xmax,bbox_ymin,bbox_ymax,abstract,title',
-    // 	size: 1000
-    // 	// qf:"title^3 author^2 subject^1",
-    // }
-    // try {
-    // 	let response = await axios({
-    // 		method: 'GET',
-    // 		url: OPEN_SEARCH_HOST + '/tethys-records/_search',
-    // 		headers: { 'Content-Type': 'application/json' },
-    // 		params: query
-    // 	});
-    // 	// Loop through the hits in the response
-    // 	response.data.hits.hits.forEach(hit => {
-    // 		// Get the geo_location attribute
-    // 		// var geo_location = hit._source.geo_location;
-    // 		let xMin = hit._source.bbox_xmin;
-    // 		let xMax = hit._source.bbox_xmax;
-    // 		let yMin = hit._source.bbox_ymin;
-    // 		let yMax = hit._source.bbox_ymax;
-    // 		var bbox: LatLngBoundsExpression = [[yMin, xMin], [yMax, xMax]];
-    // 		// Parse the WKT string to get the bounding box coordinates
-    // 		// var bbox = wktToBbox(geo_location);
-
-    // 		// // Add the bounding box to the map as a rectangle
-    // 		new Rectangle(bbox, { color: "#ff7800", weight: 1 }).addTo(map);
-    // 		// console.log(hit._source);
-    // 	});
-    // } catch (error) {
-    // 	console.error(error);
-    // }
 };
 
 const handleDrawEventCreated = async (event) => {
+    isLoading.value = true;
     filterLayerGroup.clearLayers();
     items.value = [];
 
     let layer = event.layer;
     let bounds = layer.getBounds();
-    // coverage.x_min = bounds.getSouthWest().lng;
-    // coverage.y_min = bounds.getSouthWest().lat;
-    // coverage.x_max = bounds.getNorthEast().lng;
-    // coverage.y_max = bounds.getNorthEast().lat;
 
     try {
         let response = await axios({
@@ -225,7 +156,6 @@ const handleDrawEventCreated = async (event) => {
                         filter: {
                             geo_shape: {
                                 geo_location: {
-                                    // replace 'location' with your geo-point field name
                                     shape: {
                                         type: 'envelope',
                                         coordinates: [
@@ -237,16 +167,12 @@ const handleDrawEventCreated = async (event) => {
                                 },
                             },
                         },
-                        // _source: 'author,bbox_xmin,bbox_xmax,bbox_ymin,bbox_ymax,abstract,title',
-                        // "size": 1000
                     },
                 },
             },
         });
-        // Loop through the hits in the response
+
         response.data.hits.hits.forEach((hit) => {
-            // Get the geo_location attribute
-            // var geo_location = hit._source.geo_location;
             let xMin = hit._source.bbox_xmin;
             let xMax = hit._source.bbox_xmax;
             let yMin = hit._source.bbox_ymin;
@@ -255,46 +181,255 @@ const handleDrawEventCreated = async (event) => {
                 [yMin, xMin],
                 [yMax, xMax],
             ];
-            // Parse the WKT string to get the bounding box coordinates
-            // var bbox = wktToBbox(geo_location);
 
-            // // Add the bounding box to the map as a rectangle
+            let rect = new Rectangle(bbox, {
-            let rect = new Rectangle(bbox, { color: '#ff7800', weight: 1 });
+                color: '#65DC21',
+                weight: 2,
+                fillColor: '#65DC21',
+                fillOpacity: 0.2,
+                className: 'animated-rectangle',
+            });
             filterLayerGroup.addLayer(rect);
-            // add to result list
             items.value.push(hit._source);
         });
     } catch (error) {
         console.error(error);
+    } finally {
+        isLoading.value = false;
     }
 };
 </script>
 
 <template>
     <SectionMain>
-            <div id="map" class="map-container mt-6 mb-6 rounded-2xl py-12 px-6 text-center dark:bg-slate-900 bg-white">
+        <div class="map-container-wrapper">
+            <!-- Loading Overlay -->
+            <div v-if="isLoading" class="loading-overlay">
+                <div class="loading-spinner"></div>
+                <p class="loading-text">Searching datasets...</p>
+            </div>
+
+            <!-- Map Instructions Banner -->
+            <div class="map-instructions">
+                <svg class="instruction-icon" viewBox="0 0 24 24" fill="none" stroke="currentColor" stroke-width="2">
+                    <circle cx="12" cy="12" r="10" />
+                    <path d="M12 16v-4M12 8h.01" />
+                </svg>
+                <p class="instruction-text">
+                    <strong>Tip:</strong> Use the drawing tool to select an area on the map and discover datasets
+                </p>
+            </div>
+
+            <div id="map" class="map-container">
                 <ZoomControlComponent ref="zoomControl" :mapId="mapId"></ZoomControlComponent>
-                <DrawControlComponent ref="drawControl" :preserve="false" :mapId="mapId" :southWest="southWest"
+                <DrawControlComponent ref="drawControl" :preserve="false" :mapId="mapId" :southWest="southWest" :northEast="northEast">
-                    :northEast="northEast">
                 </DrawControlComponent>
             </div>
+        </div>
     </SectionMain>
 </template>
 
-
+<style scoped>
-<style scoped lang="css">
+.map-container-wrapper {
-/* .leaflet-container {
+    position: relative;
-    height: 600px;
+    border-radius: 1rem;
-    width: 100%;
+    overflow: hidden;
-    background-color: transparent;
+    background: white;
-    outline-offset: 1px;
+    box-shadow:
-} */
+        0 4px 6px -1px rgba(0, 0, 0, 0.1),
-.leaflet-container {
+        0 2px 4px -1px rgba(0, 0, 0, 0.06);
-    height: 600px;
-    width: 100%;
 }
 
-.leaflet-container .leaflet-pane {
+.dark .map-container-wrapper {
-    z-index: 30!important;
+    background: #1f2937;
+}
+
+/* Map Instructions Banner */
+.map-instructions {
+    display: flex;
+    align-items: center;
+    gap: 0.75rem;
+    padding: 1rem 1.5rem;
+    background: linear-gradient(135deg, rgba(101, 220, 33, 0.1) 0%, rgba(53, 124, 6, 0.1) 100%);
+    border-bottom: 2px solid #e5e7eb;
+}
+
+.dark .map-instructions {
+    background: linear-gradient(135deg, rgba(101, 220, 33, 0.2) 0%, rgba(53, 124, 6, 0.2) 100%);
+    border-bottom-color: #374151;
+}
+
+.instruction-icon {
+    width: 1.5rem;
+    height: 1.5rem;
+    color: #65dc21;
+    flex-shrink: 0;
+}
+
+.instruction-text {
+    font-size: 0.875rem;
+    color: #4b5563;
+    margin: 0;
+}
+
+.dark .instruction-text {
+    color: #d1d5db;
+}
+
+.instruction-text strong {
+    color: #65dc21;
+    font-weight: 600;
+}
+
+/* Loading Overlay */
+.loading-overlay {
+    position: absolute;
+    top: 0;
+    left: 0;
+    right: 0;
+    bottom: 0;
+    background: rgba(255, 255, 255, 0.95);
+    display: flex;
+    flex-direction: column;
+    align-items: center;
+    justify-content: center;
+    z-index: 1000;
+    backdrop-filter: blur(4px);
+}
+
+.dark .loading-overlay {
+    background: rgba(31, 41, 55, 0.95);
+}
+
+.loading-spinner {
+    width: 3rem;
+    height: 3rem;
+    border: 4px solid #e5e7eb;
+    border-top-color: #65dc21;
+    border-radius: 50%;
+    animation: spin 1s linear infinite;
+}
+
+.dark .loading-spinner {
+    border-color: #374151;
+    border-top-color: #65dc21;
+}
+
+@keyframes spin {
+    to {
+        transform: rotate(360deg);
+    }
+}
+
+.loading-text {
+    margin-top: 1rem;
+    font-size: 0.875rem;
+    font-weight: 600;
+    color: #65dc21;
+}
+
+/* Map Container */
+.map-container {
+    position: relative;
+    height: 600px;
+    width: 100%;
+    background: #f9fafb;
+}
+
+.dark .map-container {
+    background: #111827;
+}
+
+/* Leaflet Overrides */
+:deep(.leaflet-container) {
+    height: 600px;
+    width: 100%;
+    background: transparent;
+    font-family: inherit;
+}
+
+:deep(.leaflet-container .leaflet-pane) {
+    z-index: 30 !important;
+}
+
+/* Enhanced Rectangle Styling */
+:deep(.animated-rectangle) {
+    animation: pulseRectangle 2s ease-in-out infinite;
+}
+
+@keyframes pulseRectangle {
+    0%,
+    100% {
+        opacity: 0.6;
+    }
+    50% {
+        opacity: 1;
+    }
+}
+
+/* Control Enhancements */
+:deep(.leaflet-control) {
+    border-radius: 0.5rem;
+    box-shadow:
+        0 4px 6px -1px rgba(0, 0, 0, 0.1),
+        0 2px 4px -1px rgba(0, 0, 0, 0.06);
+    border: none;
+}
+
+:deep(.leaflet-bar a) {
+    border-radius: 0.5rem;
+    transition: all 0.2s ease;
+}
+
+:deep(.leaflet-bar a:hover) {
+    background: #65dc21;
+    color: white;
+}
+
+:deep(.leaflet-draw-toolbar a) {
+    background: white;
+    transition: all 0.2s ease;
+}
+
+.dark :deep(.leaflet-draw-toolbar a) {
+    background: #374151;
+    color: #d1d5db;
+}
+
+:deep(.leaflet-draw-toolbar a:hover) {
+    background: #65dc21;
+}
+
+/* Popup Enhancements */
+:deep(.leaflet-popup-content-wrapper) {
+    border-radius: 0.75rem;
+    box-shadow:
+        0 10px 15px -3px rgba(0, 0, 0, 0.1),
+        0 4px 6px -2px rgba(0, 0, 0, 0.05);
+}
+
+:deep(.leaflet-popup-tip) {
+    box-shadow: 0 2px 4px rgba(0, 0, 0, 0.1);
+}
+
+/* Responsive Design */
+@media (max-width: 768px) {
+    .map-container {
+        height: 400px;
+    }
+
+    .map-instructions {
+        padding: 0.75rem 1rem;
+    }
+
+    .instruction-text {
+        font-size: 0.8125rem;
+    }
+}
+
+@media (max-width: 640px) {
+    .map-container {
+        height: 350px;
+    }
 }
 </style>

resources/js/Components/Map/draw.component.vue

@@ -1,14 +1,29 @@
 <template>
-    <div ref="drawControl" class="gba-control-draw btn-group-vertical map-control">
+    <div class="draw-control-container">
-        <!-- <button type="button" class="button is-light is-small" (click)="locateUser()" [ngClass]="isToggled ? 'is-primary': 'is-active'">
+        <button
-      <fa-icon [icon]="faSearchLocation"></fa-icon>
+            ref="drawButton"
-    </button> -->
+            class="draw-button"
-        <!--  -->
+            :class="{ 'is-active': enabled }"
-        <button ref="inputDraw"
+            type="button"
-            class="inline-flex cursor-pointer justify-center items-center whitespace-nowrap focus:outline-none transition-colors duration-150 border rounded ring-blue-700 text-black border-teal-50 hover:bg-gray-200 text-sm p-1"
+            @click.stop.prevent="toggleDraw"
-            type="button" :class="[_enabled ? 'cursor-not-allowed bg-cyan-200' : 'bg-teal-50 is-active']"
+            :aria-label="enabled ? 'Stop drawing' : 'Start drawing'"
-            @click.prevent="toggleDraw">
+            :aria-pressed="enabled"
-            <BaseIcon v-if="mdiDrawPen" :path="mdiDrawPen" />
+        >
+            <!-- Icon changes based on state -->
+            <!-- <BaseIcon 
+                v-if="enabled" 
+                :path="mdiClose" 
+                :size="20" 
+            /> -->
+            <BaseIcon               
+                :path="mdiVectorRectangle" 
+                :size="20" 
+            />
+            
+            <!-- Status indicator -->
+            <!-- <span class="draw-status-badge" :class="{ 'is-active': enabled }">
+                {{ enabled ? 'Active' : 'Draw' }}
+            </span> -->
         </button>
     </div>
 </template>
@@ -17,16 +32,14 @@
 import { Component, Vue, Prop } from 'vue-facing-decorator';
 
 import BaseIcon from '@/Components/BaseIcon.vue';
-import { mdiDrawPen } from '@mdi/js';
+import { mdiVectorRectangle, mdiClose } from '@mdi/js';
 import { MapService } from '@/Stores/map.service';
-import { Map } from 'leaflet/src/map/index';
+import { Map } from 'leaflet';
-// import { LayerGroup } from 'leaflet/src/layer/LayerGroup';
-// import { LatLngBounds, Rectangle } from 'leaflet';
 import { on, off, preventDefault } from 'leaflet/src/dom/DomEvent';
-import { Rectangle } from 'leaflet/src/layer/vector/Rectangle';
+
-import { LatLngBounds } from 'leaflet/src/geo/LatLngBounds';
+import { Rectangle } from 'leaflet';
+import { LatLngBounds } from 'leaflet';
 import { LatLng } from 'leaflet';
-import { LeafletMouseEvent } from 'leaflet';
 
 @Component({
     name: 'draw-control',
@@ -34,19 +47,19 @@ import { LeafletMouseEvent } from 'leaflet';
         BaseIcon,
     },
 })
-export default class DrawControlComponent extends Vue {
+export class DrawControlComponent extends Vue {
     public TYPE = 'rectangle';
-    mdiDrawPen = mdiDrawPen;
+    mdiVectorRectangle = mdiVectorRectangle;
-    // private featuresLayer;
+    mdiClose = mdiClose;
 
     options = {
         shapeOptions: {
             stroke: true,
-            color: '#22C55E',
+            color: '#65DC21',
             weight: 4,
             opacity: 0.5,
             fill: true,
-            fillColor: '#22C55E', //same as color by default
+            fillColor: '#65DC21',
             fillOpacity: 0.2,
             clickable: true,
         },
@@ -56,7 +69,6 @@ export default class DrawControlComponent extends Vue {
     };
 
     @Prop() public mapId: string;
-    // @Prop() public map: Map;
     @Prop public southWest: LatLng;
     @Prop public northEast: LatLng;
     @Prop({
@@ -65,13 +77,17 @@ export default class DrawControlComponent extends Vue {
     public preserve: boolean;
 
     mapService = MapService();
-    public _enabled: boolean;
+    private _enabled: boolean;
     private _map: Map;
     private _isDrawing: boolean = false;
     private _startLatLng: LatLng;
     private _mapDraggable: boolean;
     private _shape: Rectangle | undefined;
 
+    get enabled() {
+        return this._enabled;
+    }
+
     enable() {
         if (this._enabled) {
             return this;
@@ -93,49 +109,35 @@ export default class DrawControlComponent extends Vue {
         return this;
     }
 
-    enabled() {
+    // enabled() {
-        return !!this._enabled;
+    //     return !!this._enabled;
-    }
+    // }
-
-    // @Ref('inputDraw') private _inputDraw: HTMLElement;
 
     private addHooks() {
-        // L.Draw.Feature.prototype.addHooks.call(this);
         this._map = this.mapService.getMap(this.mapId);
         if (this._map) {
             this._mapDraggable = this._map.dragging.enabled();
             if (this._mapDraggable) {
                 this._map.dragging.disable();
             }
-            //TODO refactor: move cursor to styles
+            this._map.getContainer().style.cursor = 'crosshair';
-            // this._map.domElement.style.cursor = 'crosshair';
-            this._map._container.style.cursor = 'crosshair';
-            // this._tooltip.updateContent({text: this._initialLabelText});
 
             this._map
                 .on('mousedown', this._onMouseDown, this)
                 .on('mousemove', this._onMouseMove, this)
                 .on('touchstart', this._onMouseDown, this)
                 .on('touchmove', this._onMouseMove, this);          
-            // we should prevent default, otherwise default behavior (scrolling) will fire,
+          
-            // and that will cause document.touchend to fire and will stop the drawing
-            // (circle, rectangle) in touch mode.
-            // (update): we have to send passive now to prevent scroll, because by default it is {passive: true} now, which means,
-            // handler can't event.preventDefault
-            // check the news https://developers.google.com/web/updates/2016/06/passive-event-listeners
-            // document.addEventListener('touchstart', preventDefault, { passive: false });
         }
     }
 
     private removeHooks() {
-        // L.Draw.Feature.prototype.removeHooks.call(this);
         if (this._map) {
             if (this._mapDraggable) {
                 this._map.dragging.enable();
             }
 
-            //TODO refactor: move cursor to styles
+            this._map.getContainer().style.cursor = '';
-            this._map._container.style.cursor = '';
 
             this._map
                 .off('mousedown', this._onMouseDown, this)
@@ -146,46 +148,36 @@ export default class DrawControlComponent extends Vue {
             off(document, 'mouseup', this._onMouseUp, this);
             off(document, 'touchend', this._onMouseUp, this);
 
-            // document.removeEventListener('touchstart', preventDefault);
-
-            // If the box element doesn't exist they must not have moved the mouse, so don't need to destroy/return
             if (this._shape && this.preserve == false) {
                 this._map.removeLayer(this._shape);
-                // delete this._shape;
                 this._shape = undefined;
             }
         }
         this._isDrawing = false;
     }
 
-    private _onMouseDown(e: LeafletMouseEvent) {
+    // private _onMouseDown(e: LeafletMouseEvent) {
+    private _onMouseDown(e: any) {
         this._isDrawing = true;
         this._startLatLng = e.latlng;
 
-        // DomEvent.on(document, 'mouseup', this._onMouseUp, this)
-        //     .on(document, 'touchend', this._onMouseUp, this)
-        //     .preventDefault(e.originalEvent);
         on(document, 'mouseup', this._onMouseUp, this);
         on(document, 'touchend', this._onMouseUp, this);
         preventDefault(e.originalEvent);
     }
-
+    // private _onMouseMove(e: LeafletMouseEvent) {
-    private _onMouseMove(e: LeafletMouseEvent) {
+    private _onMouseMove(e: any) {
         var latlng = e.latlng;
 
-        // this._tooltip.updatePosition(latlng);
         if (this._isDrawing) {
-            // this._tooltip.updateContent(this._getTooltipText());
             this._drawShape(latlng);
         }
     }
-
     private _onMouseUp() {
         if (this._shape) {
             this._fireCreatedEvent(this._shape);
         }
 
-        // this.removeHooks();
         this.disable();
         if (this.options.repeatMode) {
             this.enable();
@@ -194,14 +186,12 @@ export default class DrawControlComponent extends Vue {
 
     private _fireCreatedEvent(shape: Rectangle) {
         var rectangle = new Rectangle(shape.getBounds(), this.options.shapeOptions);
-        // L.Draw.SimpleShape.prototype._fireCreatedEvent.call(this, rectangle);
         this._map.fire('Draw.Event.CREATED', { layer: rectangle, type: this.TYPE });
     }
 
     public removeShape() {
         if (this._shape) {
             this._map.removeLayer(this._shape);
-            // delete this._shape;
             this._shape = undefined;
         }
     }
@@ -210,7 +200,6 @@ export default class DrawControlComponent extends Vue {
         if (!this._shape) {
             const bounds = new LatLngBounds(southWest, northEast);
             this._shape = new Rectangle(bounds, this.options.shapeOptions);
-            // this._map.addLayer(this._shape);
             this._map = this.mapService.getMap(this.mapId);
             this._shape.addTo(this._map);
         } else {
@@ -218,12 +207,10 @@ export default class DrawControlComponent extends Vue {
         }
     }
 
-    // from Draw Rectangle
     private _drawShape(latlng: LatLng) {
         if (!this._shape) {
             const bounds = new LatLngBounds(this._startLatLng, latlng);
             this._shape = new Rectangle(bounds, this.options.shapeOptions);
-            // this._map.addLayer(this._shape);
             this._shape.addTo(this._map);
         } else {
             this._shape.setBounds(new LatLngBounds(this._startLatLng, latlng));
@@ -237,44 +224,336 @@ export default class DrawControlComponent extends Vue {
             this.enable();
         }
     }
-
-    // private enable() {
-    //     //if (this.map.mapTool) this.map.mapTool.on('editable:drawing:start', this.disable.bind(this));
-    //     // dom.addClass(this.map.container, 'measure-enabled');
-    //     //this.fireAndForward('showmeasure');
-    //     this._startMarker(this.southWest, this.options);
-    // }
-
-    // private disable() {
-    //     //if (this.map.mapTool) this.map.mapTool.off('editable:drawing:start', this.disable.bind(this));
-    //     // dom.removeClass(this.map.container, 'measure-enabled');
-    //     // this.featuresLayer.clearLayers();
-    //     // //this.fireAndForward('hidemeasure');
-    //     // if (this._drawingEditor) {
-    //     //     this._drawingEditor.cancelDrawing();
-    //     // }
-    // }
 }
+export default DrawControlComponent;
 </script>
 
-<style lang="css">
+<style scoped>
-.gba-control-draw {
+.draw-control-container {
+    position: absolute;
+    left: 1rem;
+    top: 8rem;
+    z-index: 1000;
     -webkit-user-select: none;
     -moz-user-select: none;
     -ms-user-select: none;
     user-select: none;
-    cursor: pointer;
-    border-radius: 4px;
-    position: absolute;
-    left: 10px;
-    top: 100px;
-    z-index: 40;
 }
 
-.btn-group-vertical button {
+.draw-button {
-    display: block;
+    display: flex;
+    align-items: center;
+    gap: 0;
+    padding: 0.625rem;
+    background: white;
+    border: 2px solid #e5e7eb;
+    border-radius: 0.75rem;
+    color: #374151;
+    cursor: pointer;
+    transition: all 0.3s cubic-bezier(0.4, 0, 0.2, 1);
+    box-shadow: 0 4px 6px -1px rgba(0, 0, 0, 0.1), 0 2px 4px -1px rgba(0, 0, 0, 0.06);
+    outline: none;
+    font-size: 0.875rem;
+    font-weight: 600;
+    position: relative;
+    overflow: visible;
+    width: 2.5rem;
+    height: 2.5rem;
+    justify-content: center;
+}
 
-    margin-left: 0;
+.dark .draw-button {
-    margin-top: 0.5em;
+    background: #1f2937;
+    border-color: #374151;
+    color: #d1d5db;
+    box-shadow: 0 4px 6px -1px rgba(0, 0, 0, 0.3);
+}
+
+/* Inactive state hover */
+.draw-button:not(.is-active):hover {
+    background: #f9fafb;
+    border-color: #65DC21;
+    color: #357C06;
+    transform: translateY(-2px);
+    /* box-shadow: 0 10px 15px -3px rgba(0, 0, 0, 0.1), 0 4px 6px -2px rgba(0, 0, 0, 0.05); */
+    width: auto;
+    padding: 0.625rem 1rem;
+    gap: 0.5rem;
+}
+
+.dark .draw-button:not(.is-active):hover {
+    background: #111827;
+    border-color: #65DC21;
+    color: #65DC21;
+}
+
+/* Active state */
+.draw-button.is-active {
+    background: linear-gradient(135deg, #65DC21 0%, #357C06 100%);
+    border-color: #357C06;
+    color: white;
+    box-shadow: 0 10px 15px -3px rgba(101, 220, 33, 0.4), 0 4px 6px -2px rgba(101, 220, 33, 0.2);
+    width: auto;
+    padding: 0.625rem 1rem;
+    gap: 0.5rem;
+}
+
+.dark .draw-button.is-active {
+    box-shadow: 0 10px 15px -3px rgba(101, 220, 33, 0.5), 0 4px 6px -2px rgba(101, 220, 33, 0.3);
+}
+
+/* Active state hover */
+.draw-button.is-active:hover {
+    background: linear-gradient(135deg, #429E04 0%, #295B09 100%);
+    transform: translateY(-2px);
+    box-shadow: 0 20px 25px -5px rgba(101, 220, 33, 0.4), 0 10px 10px -5px rgba(101, 220, 33, 0.2);
+}
+
+/* Active state press */
+.draw-button:active {
+    transform: translateY(0) scale(0.98);
+}
+
+/* Focus state */
+.draw-button:focus-visible {
+    outline: 3px solid rgba(101, 220, 33, 0.5);
+    outline-offset: 2px;
+}
+
+/* Icon styling */
+.draw-button :deep(svg) {
+    width: 1.25rem;
+    height: 1.25rem;
+    transition: transform 0.3s ease;
+}
+
+/* .draw-button.is-active :deep(svg) {
+    transform: rotate(90deg);
+} */
+
+/* Status badge */
+.draw-status-badge {
+    font-size: 0.75rem;
+    font-weight: 700;
+    text-transform: uppercase;
+    letter-spacing: 0.05em;
+    transition: all 0.3s ease;
+    max-width: 0;
+    opacity: 0;
+    overflow: hidden;
+    white-space: nowrap;
+}
+
+/* Show badge on hover when inactive */
+.draw-button:not(.is-active):hover .draw-status-badge {
+    max-width: 100px;
+    opacity: 1;
+}
+
+/* Show badge when active */
+.draw-button.is-active .draw-status-badge {
+    max-width: 100px;
+    opacity: 1;
+}
+
+/* Pulse animation for active state */
+.draw-button.is-active::before {
+    content: '';
+    position: absolute;
+    top: 50%;
+    left: 50%;
+    width: 100%;
+    height: 100%;
+    background: rgba(255, 255, 255, 0.3);
+    border-radius: 0.75rem;
+    transform: translate(-50%, -50%) scale(0);
+    animation: pulse 2s ease-out infinite;
+    pointer-events: none;
+}
+
+/* @keyframes pulse {
+    0% {
+        transform: translate(-50%, -50%) scale(0);
+        opacity: 1;
+    }
+    100% {
+        transform: translate(-50%, -50%) scale(1.5);
+        opacity: 0;
+    }
+} */
+
+/* Glow effect for active state */
+.draw-button.is-active::after {
+    content: '';
+    position: absolute;
+    top: -2px;
+    left: -2px;
+    right: -2px;
+    bottom: -2px;
+    background: linear-gradient(135deg, #65DC21, #357C06);
+    border-radius: 0.75rem;
+    opacity: 0;
+    z-index: -1;
+    transition: opacity 0.3s ease;
+    filter: blur(8px);
+}
+
+.draw-button.is-active:hover::after {
+    opacity: 0.6;
+}
+
+/* Inactive state indicator */
+.draw-button:not(.is-active) .draw-status-badge {
+    color: #6b7280;
+}
+
+.dark .draw-button:not(.is-active) .draw-status-badge {
+    color: #9ca3af;
+}
+
+.draw-button:not(.is-active):hover .draw-status-badge {
+    color: #357C06;
+}
+
+.dark .draw-button:not(.is-active):hover .draw-status-badge {
+    color: #65DC21;
+}
+
+/* Active state indicator */
+.draw-button.is-active .draw-status-badge {
+    color: white;
+    text-shadow: 0 1px 2px rgba(0, 0, 0, 0.2);
+}
+
+/* Tooltip on hover */
+.draw-button:hover::after {
+    content: attr(aria-label);
+    position: absolute;
+    bottom: calc(100% + 0.5rem);
+    left: 50%;
+    transform: translateX(-50%);
+    background: #1f2937;
+    color: white;
+    padding: 0.375rem 0.75rem;
+    border-radius: 0.375rem;
+    font-size: 0.75rem;
+    white-space: nowrap;
+    opacity: 0;
+    pointer-events: none;
+    transition: opacity 0.2s ease;
+    z-index: 1001;
+    animation: fadeInTooltip 0.2s ease 0.5s forwards;
+}
+
+/* @keyframes fadeInTooltip {
+    from {
+        opacity: 0;
+        transform: translateX(-50%) translateY(4px);
+    }
+    to {
+        opacity: 1;
+        transform: translateX(-50%) translateY(0);
+    }
+} */
+
+/* Ripple effect on click */
+.draw-button::before {
+    content: '';
+    position: absolute;
+    top: 50%;
+    left: 50%;
+    width: 0;
+    height: 0;
+    border-radius: 50%;
+    background: rgba(255, 255, 255, 0.3);
+    transform: translate(-50%, -50%);
+    transition: width 0.6s, height 0.6s;
+}
+
+.draw-button:active::before {
+    width: 300px;
+    height: 300px;
+}
+
+/* Responsive design */
+@media (max-width: 768px) {
+    .draw-control-container {
+        right: 0.75rem;
+        top: 0.75rem;
+    }
+    
+    .draw-button {
+        width: 2.25rem;
+        height: 2.25rem;
+        padding: 0.5rem;
+        font-size: 0.8125rem;
+    }
+    
+    .draw-button:not(.is-active):hover,
+    .draw-button.is-active {
+        padding: 0.5rem 0.875rem;
+    }
+    
+    .draw-button :deep(svg) {
+        width: 1.125rem;
+        height: 1.125rem;
+    }
+    
+    .draw-status-badge {
+        font-size: 0.6875rem;
+    }
+    
+    /* Hide tooltip on mobile */
+    .draw-button:hover::after {
+        display: none;
+    }
+}
+
+/* @media (max-width: 640px) {
+    .draw-control-container {
+        right: 0.5rem;
+        top: 0.5rem;
+    }
+    
+    .draw-button {
+        width: 2rem;
+        height: 2rem;
+        padding: 0.5rem;
+    }
+    
+    .draw-button:not(.is-active):hover,
+    .draw-button.is-active {
+        padding: 0.5rem 0.75rem;
+    }
+    
+    .draw-button :deep(svg) {
+        width: 1rem;
+        height: 1rem;
+    }
+} */
+
+/* Accessibility: reduce motion */
+@media (prefers-reduced-motion: reduce) {
+    .draw-button,
+    .draw-button :deep(svg),
+    .draw-status-badge {
+        transition: none;
+    }
+    
+    .draw-button.is-active::before,
+    .draw-button.is-active::after {
+        animation: none;
+    }
+}
+</style>
+
+<style>
+/* Global styles for draw mode */
+.leaflet-container.draw-mode-active {
+    cursor: crosshair !important;
+}
+
+.leaflet-container.draw-mode-active * {
+    cursor: crosshair !important;
 }
 </style>

resources/js/Components/Map/map.component.vue

@@ -1,21 +1,72 @@
 <template>
-    <div style="position: relative">
+    <div class="relative w-full">
-        <!-- <Map className="h-36" :center="state.center" :zoom="state.zoom"> // map component content </Map> -->
+        <!-- Map Container -->
-        <div :id="mapId" class="rounded">
+        <div 
-            <div class="dark:bg-slate-900 bg-slate flex flex-col">
+            :id="mapId" 
+            class="relative h-[600px] w-full bg-gray-50 dark:bg-gray-900 rounded-xl overflow-hidden"
+        >
+            <div class="relative w-full h-full">
                 <ZoomControlComponent ref="zoom" :mapId="mapId" />
                 <DrawControlComponent ref="draw" :mapId="mapId" :southWest="southWest" :northEast="northEast" />
             </div>
         </div>
-        <div class="gba-control-validate btn-group-vertical">
+        
+        <!-- Validate Button -->
+        <div class="absolute left-4 top-44 z-[1000] select-none">
             <button
-                class="min-w-27 inline-flex cursor-pointer justify-center items-center whitespace-nowrap focus:outline-none transition-colors duration-150 border rounded ring-blue-700 text-black text-sm p-1"
+                class="group flex items-center justify-center relative overflow-visible outline-none font-semibold text-sm transition-all duration-300 ease-in-out
+                       w-10 h-10 rounded-xl border-2 shadow-md
+                       focus-visible:outline focus-visible:outline-3 focus-visible:outline-offset-2"
+                :class="[
+                    validBoundingBox 
+                        ? 'bg-gradient-to-br from-lime-500 to-lime-700 border-lime-700 text-white shadow-lime-500/40 cursor-default gap-2 w-auto px-4 focus-visible:outline-lime-500/50' 
+                        : 'bg-white dark:bg-gray-800 border-red-500 text-red-600 dark:text-red-400 gap-0 hover:bg-red-50 dark:hover:bg-gray-900 hover:border-red-500 hover:text-red-700 dark:hover:text-red-300 hover:-translate-y-0.5 hover:shadow-lg hover:shadow-red-500/30 hover:w-auto hover:px-4 hover:gap-2 focus-visible:outline-red-500/50'
+                ]"
                 type="button"
                 @click.stop.prevent="validateBoundingBox"
-                :class="[validBoundingBox ? 'cursor-not-allowed bg-green-500 is-active' : 'bg-red-500 ']"
+                :aria-label="validBoundingBox ? 'Bounding box is valid' : 'Validate bounding box'"
             >
-                <!-- <BaseIcon v-if="mdiMapCheckOutline" :path="mdiMapCheckOutline" /> -->
+                <!-- Icon -->
-                {{ label }}
+                <BaseIcon 
+                    v-if="mdiMapCheckOutline" 
+                    :path="mdiMapCheckOutline" 
+                    :size="20"
+                    :class="[
+                        'transition-transform duration-300',
+                        validBoundingBox && 'animate-[checkPulse_2s_ease-in-out_infinite]'
+                    ]"
+                />
+                
+                <!-- Status badge -->
+                <span 
+                    class="text-xs font-bold uppercase tracking-wider whitespace-nowrap transition-all duration-300 overflow-hidden"
+                    :class="[
+                        validBoundingBox 
+                            ? 'max-w-[100px] opacity-100 text-white drop-shadow' 
+                            : 'max-w-0 opacity-0 group-hover:max-w-[100px] group-hover:opacity-100'
+                    ]"
+                >
+                    {{ label }}
+                </span>
+
+                <!-- Pulse animation for valid state -->
+                <span 
+                    v-if="validBoundingBox"
+                    class="absolute top-1/2 left-1/2 w-full h-full bg-white/30 rounded-xl -translate-x-1/2 -translate-y-1/2 animate-[pulse_2s_ease-out_infinite] pointer-events-none"
+                ></span>
+
+                <!-- Ripple effect on click -->
+                <span 
+                    class="absolute top-1/2 left-1/2 w-0 h-0 rounded-full bg-white/30 -translate-x-1/2 -translate-y-1/2 transition-all duration-[600ms] active:w-[300px] active:h-[300px]"
+                ></span>
+
+                <!-- Tooltip -->
+                <span 
+                    v-if="!validBoundingBox"
+                    class="absolute left-[calc(100%+0.5rem)] top-1/2 -translate-y-1/2 px-3 py-1.5 bg-gray-800 text-white text-xs rounded-md whitespace-nowrap opacity-0 pointer-events-none transition-opacity duration-200 z-[1001] group-hover:opacity-100 group-hover:animate-[fadeInTooltip_0.2s_ease_0.5s_forwards]"
+                >
+                    Click to validate
+                </span>
             </button>
         </div>
     </div>
@@ -27,8 +78,7 @@ import { Component, Vue, Prop, Ref } from 'vue-facing-decorator';
 import { Map } from 'leaflet/src/map/index';
 import { Control } from 'leaflet/src/control/Control';
 import { LatLngBoundsExpression, LatLngBounds } from 'leaflet/src/geo/LatLngBounds';
-// import { toLatLng } from 'leaflet/src/geo/LatLng';
+import { LatLng } from 'leaflet';
-import { LatLng } from 'leaflet'; //'leaflet/src/geo/LatLng';
 import { tileLayerWMS } from 'leaflet/src/layer/tile/TileLayer.WMS';
 import { Attribution } from 'leaflet/src/control/Control.Attribution';
 import { mdiMapCheckOutline } from '@mdi/js';
@@ -37,22 +87,15 @@ import BaseIcon from '@/Components/BaseIcon.vue';
 import { MapOptions } from './MapOptions';
 import { LayerOptions, LayerMap } from './LayerOptions';
 import { MapService } from '@/Stores/map.service';
-import ZoomControlComponent from './zoom.component.vue';
+import { ZoomControlComponent } from './zoom.component.vue';
-import DrawControlComponent from './draw.component.vue';
+import { DrawControlComponent } from './draw.component.vue';
 import { Coverage } from '@/Dataset';
 import { canvas } from 'leaflet/src/layer/vector/Canvas';
 import { svg } from 'leaflet/src/layer/vector/SVG';
 import Notification from '@/utils/toast';
 
 Map.include({
-    // @namespace Map; @method getRenderer(layer: Path): Renderer
-    // Returns the instance of `Renderer` that should be used to render the given
-    // `Path`. It will ensure that the `renderer` options of the map and paths
-    // are respected, and that the renderers do exist on the map.
     getRenderer: function (layer) {
-        // @namespace Path; @option renderer: Renderer
-        // Use this specific instance of `Renderer` for this path. Takes
-        // precedence over the map's [default renderer](#map-renderer).
         var renderer = layer.options.renderer || this._getPaneRenderer(layer.options.pane) || this.options.renderer || this._renderer;
 
         if (!renderer) {
@@ -79,15 +122,11 @@ Map.include({
     },
 
     _createRenderer: function (options) {
-        // @namespace Map; @option preferCanvas: Boolean = false
-        // Whether `Path`s should be rendered on a `Canvas` renderer.
-        // By default, all `Path`s are rendered in a `SVG` renderer.
         return (this.options.preferCanvas && canvas(options)) || svg(options);
     },
 });
 
 const DEFAULT_BASE_LAYER_NAME = 'BaseLayer';
-// const DEFAULT_BASE_LAYER_URL = 'https://{s}.tile.openstreetmap.org/{z}/{x}/{y}.png';
 const DEFAULT_BASE_LAYER_ATTRIBUTION = '&copy; <a target="_blank" href="http://osm.org/copyright">OpenStreetMap</a> contributors';
 
 @Component({
@@ -98,33 +137,19 @@ const DEFAULT_BASE_LAYER_ATTRIBUTION = '&copy; <a target="_blank" href="http://o
         BaseIcon,
     },
 })
-export default class MapComponent extends Vue {
+export class MapComponent extends Vue {
-    /**
-     * A map with the given ID is created inside this component.
-     * This ID can be used the get the map instance over the map cache service.
-     */
     @Prop()
     public mapId: string;
 
-    /**
-     * The corresponding leaflet map options (see: https://leafletjs.com/reference-1.3.4.html#map-option)
-     */
     @Prop()
     public mapOptions: MapOptions;
 
     @Prop()
     public coverage: Coverage;
 
-    // markerService: MarkerService
-    /**
-     * Bounds for the map
-     */
     @Prop({ default: null })
     public fitBounds: LatLngBoundsExpression;
 
-    /**
-     * Describes the the zoom control options (see: https://leafletjs.com/reference-1.3.4.html#control-zoom)
-     */
     @Prop()
     public zoomControlOptions: Control.ZoomOptions;
 
@@ -132,7 +157,7 @@ export default class MapComponent extends Vue {
     public baseMaps: LayerMap;
 
     get label(): string {
-        return this.validBoundingBox ? '  valid' : 'invalid';
+        return this.validBoundingBox ? 'Valid' : 'Invalid';
     }
 
     get validBoundingBox(): boolean {
@@ -144,35 +169,31 @@ export default class MapComponent extends Vue {
 
         let isBoundValid = true;
         if (isValidNumber) {
-            let _southWest: LatLng = new LatLng(this.coverage.y_min, this.coverage.x_min);
+            let _southWest: LatLng = new LatLng(this.coverage.y_min!, this.coverage.x_min!);
-            let _northEast: LatLng = new LatLng(this.coverage.y_max, this.coverage.x_max);
+            let _northEast: LatLng = new LatLng(this.coverage.y_max!, this.coverage.x_max!);
             const bounds = new LatLngBounds(this.southWest, this.northEast);
             if (!bounds.isValid() || !(_southWest.lat < _northEast.lat && _southWest.lng < _northEast.lng)) {
-                // this.draw.removeShape();
-                // Notification.showTemporary('Bounds are not valid.');
                 isBoundValid = false;
             }
         }
         return isValidNumber && isBoundValid;
     }
 
-    @Ref('zoom') private zoom: ZoomControlComponent;
+    @Ref('zoom') 
-    @Ref('draw') private draw: DrawControlComponent;
+    private zoom: ZoomControlComponent;
+    
+    @Ref('draw') 
+    private draw: DrawControlComponent;
 
-    // services:
     mapService = MapService();
 
     mdiMapCheckOutline = mdiMapCheckOutline;
     southWest: LatLng;
     northEast: LatLng;
 
-    /**
-     * Informs when initialization is done with map id.
-     */
     public onMapInitializedEvent: EventEmitter<string> = new EventEmitter<string>();
 
     public map!: Map;
-    // protected drawnItems!: FeatureGroup<any>;
 
     validateBoundingBox() {
         if (this.validBoundingBox == false) {
@@ -182,53 +203,22 @@ export default class MapComponent extends Vue {
         }
         this.map.control && this.map.control.disable();
         var _this = this;
-        // // _this.locationErrors.length = 0;
-        // this.drawnItems.clearLayers();
-        // //var xmin = document.getElementById("xmin").value;
-        // var xmin = (<HTMLInputElement>document.getElementById("xmin")).value;
-        // // var ymin = document.getElementById("ymin").value;
-        // var ymin = (<HTMLInputElement>document.getElementById("ymin")).value;
-        // //var xmax = document.getElementById("xmax").value;
-        // var xmax = (<HTMLInputElement>document.getElementById("xmax")).value;
-        // //var ymax = document.getElementById("ymax").value;
-        // var ymax = (<HTMLInputElement>document.getElementById("ymax")).value;
-        // var bounds = [[ymin, xmin], [ymax, xmax]];
  
-        // let _southWest: LatLng;
+        let _southWest: LatLng = new LatLng(this.coverage.y_min!, this.coverage.x_min!);
-        // let _northEast: LatLng;
+        let _northEast: LatLng = new LatLng(this.coverage.y_max!, this.coverage.x_max!);
-        // if (this.coverage.x_min && this.coverage.y_min) {
+ 
-        let _southWest: LatLng = new LatLng(this.coverage.y_min, this.coverage.x_min);
-        // }
-        // if (this.coverage.x_max && this.coverage.y_max) {
-        let _northEast: LatLng = new LatLng(this.coverage.y_max, this.coverage.x_max);
-        // }
         const bounds = new LatLngBounds(this.southWest, this.northEast);
         if (!bounds.isValid() || !(_southWest.lat < _northEast.lat && _southWest.lng < _northEast.lng)) {
             this.draw.removeShape();
             Notification.showTemporary('Bounds are not valid.');
         } else {
-            // this.draw.drawShape(_southWest, _northEast);
             try {
                 this.draw.drawShape(_southWest, _northEast);
                 _this.map.fitBounds(bounds);
 
-                // var boundingBox = L.rectangle(bounds, { color: "#005F6A", weight: 1 });
+                Notification.showSuccess('Valid bounding box');
-                // // this.geolocation.xmin = xmin;
-                // // this.geolocation.ymin = ymin;
-                // // this.geolocation.xmax = xmax;
-                // // this.geolocation.ymax = ymax;
-
-                // _this.drawnItems.addLayer(boundingBox);
-                // _this.map.fitBounds(bounds);
-                // this.options.message = "valid bounding box";
-                // this.$toast.success("valid bounding box", this.options);
-                Notification.showSuccess('valid bounding box');
             } catch (err) {
-                // this.options.message = e.message;
-                // // _this.errors.push(e);
-                // this.$toast.error(e.message, this.options);
                 Notification.showTemporary('An error occurred while drawing bounding box');
-                // generatingCodes.value = false;
                 throw err;
             }
         }
@@ -242,16 +232,11 @@ export default class MapComponent extends Vue {
         this.map.off('zoomend zoomlevelschange');
     }
 
-    // @Emit(this.onMapInitializedEvent)
     protected initMap(): void {
-        // let map: Map = (this.map = this.mapService.getMap(this.mapId));
-
         let map: Map = (this.map = new Map(this.mapId, this.mapOptions));
         this.mapService.setMap(this.mapId, map);
         map.scrollWheelZoom.disable();
 
-        // return this.mapId;
-        //    this.$emit("onMapInitializedEvent", this.mapId);
         this.onMapInitializedEvent.emit(this.mapId);
         this.addBaseMap();
 
@@ -260,45 +245,28 @@ export default class MapComponent extends Vue {
 
         map.on(
             'Draw.Event.CREATED',
-            function (event) {
+            (event: any) => {
-                // drawnItems.clearLayers();
-                // var type = event.type;
                 var layer = event.layer;
-
-                // if (type === "rectancle") {
-                // layer.bindPopup("A popup!" + layer.getBounds().toBBoxString());
                 var bounds = layer.getBounds();
                 this.coverage.x_min = bounds.getSouthWest().lng;
                 this.coverage.y_min = bounds.getSouthWest().lat;
-                // console.log(this.geolocation.xmin);
                 this.coverage.x_max = bounds.getNorthEast().lng;
                 this.coverage.y_max = bounds.getNorthEast().lat;
-                // }
-
-                // drawnItems.addLayer(layer);
             },
-            this,
         );
 
-        // Initialise the FeatureGroup to store editable layers
-        // let drawnItems = (this.drawnItems = new FeatureGroup());
-        // map.addLayer(drawnItems);
-
         this.map.on('zoomend zoomlevelschange', this.zoom.updateDisabled, this.zoom);
 
-        // if (this.fitBounds) {
-        //     this.map.fitBounds(this.fitBounds);
-        // }
         if (this.coverage.x_min && this.coverage.y_min) {
-            this.southWest = new LatLng(this.coverage.y_min, this.coverage.x_min);
+            this.southWest = new LatLng(this.coverage.y_min!, this.coverage.x_min!);
         } else {
             this.southWest = new LatLng(46.5, 9.9);
         }
         if (this.coverage.x_max && this.coverage.y_max) {
-            this.northEast = new LatLng(this.coverage.y_max, this.coverage.x_max);
+            this.northEast = new LatLng(this.coverage.y_max!, this.coverage.x_max!);
         } else {
             this.northEast = new LatLng(48.9, 16.9);
-        } // this.northEast = toLatLng(48.9, 16.9);
+        }
         const bounds = new LatLngBounds(this.southWest, this.northEast);
         map.fitBounds(bounds);
 
@@ -318,10 +286,6 @@ export default class MapComponent extends Vue {
     private addBaseMap(layerOptions?: LayerOptions): void {
         if (this.map) {
             if (!this.baseMaps || this.baseMaps.size === 0) {
-                // let bmapgrau = tileLayer('https://{s}.wien.gv.at/basemap/bmapgrau/normal/google3857/{z}/{y}/{x}.png', {
-                //         subdomains: ['maps', 'maps1', 'maps2', 'maps3', 'maps4'],
-                //         attribution: 'Datenquelle: <a href="http://www.basemap.at/">basemap.at</a>',
-                // });
                 let osmGgray = tileLayerWMS('https://ows.terrestris.de/osm-gray/service', {
                     format: 'image/png',
                     attribution: DEFAULT_BASE_LAYER_ATTRIBUTION,
@@ -337,45 +301,61 @@ export default class MapComponent extends Vue {
         }
     }
 }
+export default MapComponent;
 </script>
 
-<style scoped lang="css">
+<style scoped>
-/* .leaflet-container {
+/* Leaflet container - only what can't be done with Tailwind */
+:deep(.leaflet-container) {
     height: 600px;
     width: 100%;
-    background-color: transparent;
+    background: transparent;
-    outline-offset: 1px;
-} */
-.leaflet-container {
-    height: 600px;
-    width: 100%;
-    background: none;
 }
 
-.gba-control-validate {
+:deep(.leaflet-container .leaflet-pane) {
-    -webkit-user-select: none;
+    z-index: 30 !important;
-    -moz-user-select: none;
-    -ms-user-select: none;
-    user-select: none;
-    cursor: pointer;
-    border-radius: 4px;
-    position: absolute;
-    left: 10px;
-    top: 150px;
-    z-index: 999;
 }
 
-.btn-group-vertical button {
+/* Custom animations */
-    display: block;
+@keyframes checkPulse {
-
+    0%, 100% {
-    margin-left: 0;
+        transform: scale(1);
-    margin-top: 0.5em;
+    }
+    50% {
+        transform: scale(1.1);
+    }
 }
 
-.leaflet-container .leaflet-pane {
+@keyframes pulse {
-    z-index: 30!important;
+    0% {
+        transform: translate(-50%, -50%) scale(0);
+        opacity: 1;
+    }
+    100% {
+        transform: translate(-50%, -50%) scale(1.5);
+        opacity: 0;
+    }
+}
+
+@keyframes fadeInTooltip {
+    from {
+        opacity: 0;
+    }
+    to {
+        opacity: 1;
+    }
+}
+
+/* Responsive adjustments */
+@media (max-width: 768px) {
+    :deep(.leaflet-container) {
+        height: 100%;
+    }
+}
+
+@media (max-width: 640px) {
+    :deep(.leaflet-container) {
+        height: 100%;
+    }
 }
-/* .leaflet-pane  {
-    z-index: 30;
-} */
 </style>

resources/js/Components/Map/zoom.component.vue

@@ -1,21 +1,27 @@
 <template>
-    <div class="gba-control-zoom btn-group-vertical">
+    <div class="zoom-control-container">
         <button
             ref="inputPlus"
-            class="disabled:bg-gray-200 inline-flex cursor-pointer justify-center items-center whitespace-nowrap focus:outline-none transition-colors duration-150 border rounded ring-blue-700 bg-teal-50 text-black border-teal-50 text-sm p-1"
+            class="zoom-button zoom-button-plus"
             type="button"
             @click.stop.prevent="zoomIn"
+            :disabled="isZoomInDisabled"
+            aria-label="Zoom in"
         >
-            <BaseIcon v-if="mdiPlus" :path="mdiPlus" />
+            <BaseIcon v-if="mdiPlus" :path="mdiPlus" :size="20" />
         </button>
 
+        <div class="zoom-separator"></div>
+
         <button
             ref="inputMinus"
-            class="disabled:bg-gray-200 inline-flex cursor-pointer justify-center items-center whitespace-nowrap focus:outline-none transition-colors duration-150 border rounded ring-blue-700 bg-teal-50 text-black border-teal-50 text-sm p-1"
+            class="zoom-button zoom-button-minus"
             type="button"
             @click.stop.prevent="zoomOut"
+            :disabled="isZoomOutDisabled"
+            aria-label="Zoom out"
         >
-            <BaseIcon v-if="mdiMinus" :path="mdiMinus" />
+            <BaseIcon v-if="mdiMinus" :path="mdiMinus" :size="20" />
         </button>
     </div>
 </template>
@@ -26,6 +32,7 @@ import { MapService } from '@/Stores/map.service';
 
 import BaseIcon from '@/Components/BaseIcon.vue';
 import { mdiPlus, mdiMinus } from '@mdi/js';
+import { Map } from 'leaflet';
 
 @Component({
     name: 'zoom-control',
@@ -33,7 +40,7 @@ import { mdiPlus, mdiMinus } from '@mdi/js';
         BaseIcon,
     },
 })
-export default class ZoomControlComponent extends Vue {
+export class ZoomControlComponent extends Vue {
     mdiPlus = mdiPlus;
     mdiMinus = mdiMinus;
 
@@ -46,16 +53,23 @@ export default class ZoomControlComponent extends Vue {
     @Ref('inputMinus') inputMinus: HTMLButtonElement;
 
     mapService = MapService();
-    map;
+    map: Map | null = null;
+    isZoomInDisabled = false;
+    isZoomOutDisabled = false;
 
-    // mounted() {
+    mounted() {
-    //     let map = (this.map = this.mapService.getMap(this.mapId));
+        let map = (this.map = this.mapService.getMap(this.mapId));
-    //     map.on('zoomend zoomlevelschange', this.updateDisabled, this);
+        if (map) {
-    // }
+            map.on('zoomend zoomlevelschange', this.updateDisabled, this);
+            this.updateDisabled();
+        }
+    }
 
-    // unmounted() {
+    unmounted() {
-    //     this.map.off('zoomend zoomlevelschange');
+        if (this.map) {
-    // }
+            this.map.off('zoomend zoomlevelschange', this.updateDisabled, this);
+        }
+    }
 
     public zoomIn() {
         let map = this.mapService.getMap(this.mapId);
@@ -69,44 +83,266 @@ export default class ZoomControlComponent extends Vue {
 
     public updateDisabled() {
         let map = this.mapService.getMap(this.mapId);
-        // let className = 'leaflet-disabled';
+        if (!map) return;
 
-        this.inputPlus.disabled = false;
+        this.isZoomInDisabled = map.getZoom() >= map.getMaxZoom();
-        this.inputPlus.setAttribute('aria-disabled', 'false');
+        this.isZoomOutDisabled = map.getZoom() <= map.getMinZoom();
 
-        this.inputMinus.disabled = false;
+        if (this.inputPlus) {
-        this.inputMinus.setAttribute('aria-disabled', 'false');
+            this.inputPlus.disabled = this.isZoomInDisabled;
-
+            this.inputPlus.setAttribute('aria-disabled', this.isZoomInDisabled.toString());
-        if (map.getZoom() === map.getMinZoom()) {
-            this.inputMinus.disabled = true;
-            this.inputMinus.setAttribute('aria-disabled', 'true');
         }
-        if (map.getZoom() === map.getMaxZoom()) {
+
-            this.inputPlus.disabled = true;
+        if (this.inputMinus) {
-            this.inputPlus.setAttribute('aria-disabled', 'true');
+            this.inputMinus.disabled = this.isZoomOutDisabled;
+            this.inputMinus.setAttribute('aria-disabled', this.isZoomOutDisabled.toString());
         }
     }
 }
+export default ZoomControlComponent;
 </script>
 
-<style lang="css">
+<style scoped>
-.gba-control-zoom {
+.zoom-control-container {
+    position: absolute;
+    left: 1rem;
+    top: 1rem;
+    z-index: 1000;
+    display: flex;
+    flex-direction: column;
+    gap: 0;
+    background: white;
+    border-radius: 0.75rem;
+    box-shadow:
+        0 4px 6px -1px rgba(0, 0, 0, 0.1),
+        0 2px 4px -1px rgba(0, 0, 0, 0.06);
+    overflow: hidden;
     -webkit-user-select: none;
     -moz-user-select: none;
     -ms-user-select: none;
     user-select: none;
-    cursor: pointer;
+    transition: box-shadow 0.2s ease;
-    border-radius: 4px;
-    position: absolute;
-    left: 10px;
-    top: 10px;
-    z-index: 40;
 }
 
-.btn-group-vertical button {
+.zoom-control-container:hover {
-    display: block;
+    box-shadow:
+        0 10px 15px -3px rgba(0, 0, 0, 0.1),
+        0 4px 6px -2px rgba(0, 0, 0, 0.05);
+}
 
-    margin-left: 0;
+.dark .zoom-control-container {
-    margin-top: 0.5em;
+    background: #1f2937;
+    box-shadow: 0 4px 6px -1px rgba(0, 0, 0, 0.3);
+}
+
+.dark .zoom-control-container:hover {
+    box-shadow: 0 10px 15px -3px rgba(0, 0, 0, 0.5);
+}
+
+.zoom-button {
+    display: flex;
+    align-items: center;
+    justify-content: center;
+    width: 2.5rem;
+    height: 2.5rem;
+    padding: 0;
+    background: white;
+    border: none;
+    color: #374151;
+    cursor: pointer;
+    transition: all 0.2s ease;
+    position: relative;
+    outline: none;
+}
+
+.dark .zoom-button {
+    background: #1f2937;
+    color: #d1d5db;
+}
+
+.zoom-button:hover:not(:disabled) {
+    background: #65dc21;
+    color: white;
+    transform: scale(1.05);
+}
+
+.dark .zoom-button:hover:not(:disabled) {
+    background: #65dc21;
+}
+
+.zoom-button:active:not(:disabled) {
+    transform: scale(0.95);
+}
+
+.zoom-button:disabled {
+    cursor: not-allowed;
+    opacity: 0.4;
+    background: #f3f4f6;
+    color: #9ca3af;
+}
+
+.dark .zoom-button:disabled {
+    background: #111827;
+    color: #4b5563;
+}
+
+.zoom-button:focus-visible {
+    outline: 2px solid #65dc21;
+    outline-offset: -2px;
+}
+
+/* Icon sizing */
+.zoom-button :deep(svg) {
+    width: 1.25rem;
+    height: 1.25rem;
+}
+
+/* Separator between buttons */
+.zoom-separator {
+    height: 1px;
+    background: #e5e7eb;
+}
+
+.dark .zoom-separator {
+    background: #374151;
+}
+
+/* Hover effect for the plus button */
+.zoom-button-plus::after {
+    content: '';
+    position: absolute;
+    top: 0;
+    left: 0;
+    right: 0;
+    bottom: 0;
+    background: linear-gradient(135deg, rgba(101, 220, 33, 0.1) 0%, rgba(53, 124, 6, 0.1) 100%);
+    opacity: 0;
+    transition: opacity 0.2s ease;
+    pointer-events: none;
+}
+
+.zoom-button-plus:hover:not(:disabled)::after {
+    opacity: 1;
+}
+
+/* Hover effect for the minus button */
+.zoom-button-minus::after {
+    content: '';
+    position: absolute;
+    top: 0;
+    left: 0;
+    right: 0;
+    bottom: 0;
+    background: linear-gradient(135deg, rgba(101, 220, 33, 0.1) 0%, rgba(53, 124, 6, 0.1) 100%);
+    opacity: 0;
+    transition: opacity 0.2s ease;
+    pointer-events: none;
+}
+
+.zoom-button-minus:hover:not(:disabled)::after {
+    opacity: 1;
+}
+
+/* Responsive design */
+@media (max-width: 768px) {
+    .zoom-control-container {
+        left: 0.75rem;
+        top: 0.75rem;
+    }
+
+    .zoom-button {
+        width: 2.25rem;
+        height: 2.25rem;
+    }
+
+    .zoom-button :deep(svg) {
+        width: 1.125rem;
+        height: 1.125rem;
+    }
+}
+
+@media (max-width: 640px) {
+    .zoom-control-container {
+        left: 0.5rem;
+        top: 0.5rem;
+    }
+
+    .zoom-button {
+        width: 2rem;
+        height: 2rem;
+    }
+
+    .zoom-button :deep(svg) {
+        width: 1rem;
+        height: 1rem;
+    }
+}
+
+/* Animation for button press */
+@keyframes buttonPress {
+    0% {
+        transform: scale(1);
+    }
+    50% {
+        transform: scale(0.95);
+    }
+    100% {
+        transform: scale(1);
+    }
+}
+
+.zoom-button:active:not(:disabled) {
+    animation: buttonPress 0.2s ease;
+}
+
+/* Tooltip-like effect on hover (optional) */
+.zoom-button-plus:hover:not(:disabled)::before {
+    content: 'Zoom In';
+    position: absolute;
+    left: calc(100% + 0.5rem);
+    top: 50%;
+    transform: translateY(-50%);
+    background: #1f2937;
+    color: white;
+    padding: 0.25rem 0.5rem;
+    border-radius: 0.25rem;
+    font-size: 0.75rem;
+    white-space: nowrap;
+    opacity: 0;
+    animation: fadeIn 0.2s ease 0.5s forwards;
+    pointer-events: none;
+    z-index: 1001;
+}
+
+.zoom-button-minus:hover:not(:disabled)::before {
+    content: 'Zoom Out';
+    position: absolute;
+    left: calc(100% + 0.5rem);
+    top: 50%;
+    transform: translateY(-50%);
+    background: #1f2937;
+    color: white;
+    padding: 0.25rem 0.5rem;
+    border-radius: 0.25rem;
+    font-size: 0.75rem;
+    white-space: nowrap;
+    opacity: 0;
+    animation: fadeIn 0.2s ease 0.5s forwards;
+    pointer-events: none;
+    z-index: 1001;
+}
+
+@keyframes fadeIn {
+    to {
+        opacity: 1;
+    }
+}
+
+/* Hide tooltips on mobile */
+@media (max-width: 768px) {
+    .zoom-button-plus:hover:not(:disabled)::before,
+    .zoom-button-minus:hover:not(:disabled)::before {
+        display: none;
+    }
 }
 </style>

resources/js/Components/TablePersons.vue

@@ -1,273 +1,571 @@
 <script setup lang="ts">
-import { computed, ref } from 'vue';
+import { computed, ref, watch } from 'vue';
-// import { MainService } from '@/Stores/main';
-// import { StyleService } from '@/Stores/style.service';
 import { mdiTrashCan } from '@mdi/js';
-import { mdiDragVariant } from '@mdi/js';
+import { mdiDragVariant, mdiChevronLeft, mdiChevronRight } from '@mdi/js';
+import { mdiAccount, mdiDomain } from '@mdi/js';
 import BaseIcon from '@/Components/BaseIcon.vue';
-// import CardBoxModal from '@/Components/CardBoxModal.vue';
-// import TableCheckboxCell from '@/Components/TableCheckboxCell.vue';
-// import BaseLevel from '@/Components/BaseLevel.vue';
-import BaseButtons from '@/Components/BaseButtons.vue';
 import BaseButton from '@/Components/BaseButton.vue';
-// import UserAvatar from '@/Components/UserAvatar.vue';
-// import Person from 'App/Models/Person';
 import { Person } from '@/Dataset';
 import Draggable from 'vuedraggable';
 import FormControl from '@/Components/FormControl.vue';
 
-const props = defineProps({
+interface Props {
-    checkable: Boolean,
+    checkable?: boolean;
-    persons: {
+    persons?: Person[];
-        type: Array<Person>,
+    relation: string;
-        default: () => [],
+    contributortypes?: Record<string, string>;
-    },
+    errors?: Record<string, string[]>;
-    relation: {
+    isLoading?: boolean;
-        type: String,
+    canDelete?: boolean;
-        required: true,
+    canEdit?: boolean;
-    },
+    canReorder?: boolean;
-    contributortypes: {
+}
-        type: Object,
+
-        default: () => ({}),
+const props = withDefaults(defineProps<Props>(), {
-    },
+    checkable: false,
-    errors: {
+    persons: () => [],
-        type: Object,
+    contributortypes: () => ({}),
-        default: () => ({}),
+    errors: () => ({}),
-    },
+    isLoading: false,
+    canDelete: true,
+    canEdit: true,
+    canReorder: true,
 });
 
-// const styleService = StyleService();
+const emit = defineEmits<{
-// const mainService = MainService();
+    'update:persons': [value: Person[]];
-// const items = computed(() => props.persons);
+    'remove-person': [index: number, person: Person];
+    'person-updated': [index: number, person: Person];
+    'reorder': [oldIndex: number, newIndex: number];
+}>();
 
+// Local state
+const perPage = ref(5);
+const currentPage = ref(0);
+const dragEnabled = ref(props.canReorder);
+
+// Name type options
+const nameTypeOptions = {
+    'Personal': 'Personal',
+    'Organizational': 'Org'
+};
+
+// Computed properties
 const items = computed({
     get() {
         return props.persons;
     },
-    // setter
     set(value) {
-        // Note: we are using destructuring assignment syntax here.
-
         props.persons.length = 0;
         props.persons.push(...value);
     },
 });
 
-// const isModalActive = ref(false);
+const itemsPaginated = computed(() => {
-// const isModalDangerActive = ref(false);
+    const start = perPage.value * currentPage.value;
-const perPage = ref(5);
+    const end = perPage.value * (currentPage.value + 1);
-const currentPage = ref(0);
+    return items.value.slice(start, end);
-// const checkedRows = ref([]);
-
-const itemsPaginated = computed({
-    get() {
-        return items.value.slice(perPage.value * currentPage.value, perPage.value * (currentPage.value + 1));
-    },
-    // setter
-    set(value) {
-        // Note: we are using destructuring assignment syntax here.
-
-        props.persons.length = 0;
-        props.persons.push(...value);
-    },
 });
 
 const numPages = computed(() => Math.ceil(items.value.length / perPage.value));
-
 const currentPageHuman = computed(() => currentPage.value + 1);
+const hasMultiplePages = computed(() => numPages.value > 1);
+const showContributorTypes = computed(() => Object.keys(props.contributortypes).length > 0);
 
 const pagesList = computed(() => {
-    const pagesList: Array<number> = [];
+    const pages: number[] = [];
+    const maxVisible = 10;
 
-    for (let i = 0; i < numPages.value; i++) {
+    if (numPages.value <= maxVisible) {
-        pagesList.push(i);
+        for (let i = 0; i < numPages.value; i++) {
+            pages.push(i);
+        }
+    } else {
+        // Smart pagination with ellipsis
+        if (currentPage.value <= 2) {
+            for (let i = 0; i < 4; i++) pages.push(i);
+            pages.push(-1); // Ellipsis marker
+            pages.push(numPages.value - 1);
+        } else if (currentPage.value >= numPages.value - 3) {
+            pages.push(0);
+            pages.push(-1);
+            for (let i = numPages.value - 4; i < numPages.value; i++) {
+                pages.push(i);
+            }
+        } else {
+            pages.push(0);
+            pages.push(-1);
+            for (let i = currentPage.value - 1; i <= currentPage.value + 1; i++) {
+                pages.push(i);
+            }
+            pages.push(-1);
+            pages.push(numPages.value - 1);
+        }
     }
 
-    return pagesList;
+    return pages;
 });
 
-const removeAuthor = (key: number) => {
+// Methods
-    items.value.splice(key, 1);
+const removeAuthor = (index: number) => {
+    const actualIndex = perPage.value * currentPage.value + index;
+    const person = items.value[actualIndex];
+
+    const displayName = person.name_type === 'Organizational' 
+        ? person.last_name || person.email 
+        : `${person.first_name || ''} ${person.last_name || person.email}`.trim();
+
+    if (confirm(`Are you sure you want to remove ${displayName}?`)) {
+        items.value.splice(actualIndex, 1);
+        emit('remove-person', actualIndex, person);
+
+        if (itemsPaginated.value.length === 0 && currentPage.value > 0) {
+            currentPage.value--;
+        }
+    }
 };
 
-// const remove = (arr, cb) => {
+const updatePerson = (index: number, field: keyof Person, value: any) => {
-// 	const newArr = [];
+    const actualIndex = perPage.value * currentPage.value + index;
+    const person = items.value[actualIndex];
     
-// 	arr.forEach((item) => {
+    // Handle name_type change - clear first_name if switching to Organizational
-// 		if (!cb(item)) {
+    if (field === 'name_type' && value === 'Organizational') {
-// 			newArr.push(item);
+        person.first_name = '';
-// 		}
+    }
-// 	});
     
-// 	return newArr;
+    (person as any)[field] = value;
-// };
+    emit('person-updated', actualIndex, person);
+};
 
-// const checked = (isChecked, client) => {
+const goToPage = (page: number) => {
-// 	if (isChecked) {
+    if (page >= 0 && page < numPages.value) {
-// 		checkedRows.value.push(client);
+        currentPage.value = page;
-// 	} else {
+    }
-// 		checkedRows.value = remove(checkedRows.value, (row) => row.id === client.id);
+};
-// 	}
+
-// };
+const getFieldError = (index: number, field: string): string => {
+    const actualIndex = perPage.value * currentPage.value + index;
+    const errorKey = `${props.relation}.${actualIndex}.${field}`;
+    return props.errors[errorKey]?.join(', ') || '';
+};
+
+const handleDragEnd = (evt: any) => {
+    if (evt.oldIndex !== evt.newIndex) {
+        emit('reorder', evt.oldIndex, evt.newIndex);
+    }
+};
+
+// Watchers
+watch(
+    () => props.persons.length,
+    () => {
+        if (currentPage.value >= numPages.value && numPages.value > 0) {
+            currentPage.value = numPages.value - 1;
+        }
+    },
+);
+
+// Pagination helper
+const perPageOptions = [
+    { value: 5, label: '5 per page' },
+    { value: 10, label: '10 per page' },
+    { value: 20, label: '20 per page' },
+    { value: 50, label: '50 per page' },
+];
 </script>
 
 <template>
-    <!-- <CardBoxModal v-model="isModalActive" title="Sample modal">
+    <div class="card">
-		<p>Lorem ipsum dolor sit amet <b>adipiscing elit</b></p>
+        <!-- Table Controls -->
-		<p>This is sample modal</p>
+        <div v-if="hasMultiplePages" class="flex justify-between items-center px-4 py-2.5 border-b border-gray-200 dark:border-slate-700 bg-gray-50 dark:bg-slate-800/50">
-	</CardBoxModal>
+            <div class="flex items-center gap-2">
+                <span class="text-xs text-gray-600 dark:text-gray-400">
+                    {{ currentPage * perPage + 1 }}-{{ Math.min((currentPage + 1) * perPage, items.length) }} of {{ items.length }}
+                </span>
+            </div>
+            <select
+                v-model="perPage"
+                @change="currentPage = 0"
+                class="px-2 py-1 text-xs border rounded dark:bg-slate-800 dark:border-slate-600 focus:ring-2 focus:ring-blue-500 focus:border-transparent"
+            >
+                <option v-for="option in perPageOptions" :key="option.value" :value="option.value">
+                    {{ option.label }}
+                </option>
+            </select>
+        </div>
 
-	<CardBoxModal v-model="isModalDangerActive" large-title="Please confirm" button="danger" has-cancel>
+        <!-- Table -->
-		<p>Lorem ipsum dolor sit amet <b>adipiscing elit</b></p>
+        <div class="overflow-x-auto">
-		<p>This is sample modal</p>
+            <table class="w-full table-compact">
-	</CardBoxModal> -->
+                <thead>
+                    <tr class="bg-gray-50 dark:bg-slate-800/50 border-b border-gray-200 dark:border-slate-700">
+                        <th v-if="canReorder" class="w-8 px-2 py-2" />
+                        <th scope="col" class="text-left px-2 py-2 text-xs font-semibold text-gray-600 dark:text-gray-300 w-10">#</th>
+                        <th class="text-left px-2 py-2 text-[10px] font-semibold text-gray-600 dark:text-gray-300 w-40">Type</th>
+                        <th class="text-left px-2 py-2 text-xs font-semibold text-gray-600 dark:text-gray-300 min-w-[120px]">First Name</th>
+                        <th class="text-left px-2 py-2 text-xs font-semibold text-gray-600 dark:text-gray-300 min-w-[160px]">Last Name / Org</th>
+                        <th class="text-left px-2 py-2 text-xs font-semibold text-gray-600 dark:text-gray-300 min-w-[140px]">ORCID</th>
+                        <th class="text-left px-2 py-2 text-xs font-semibold text-gray-600 dark:text-gray-300 min-w-[160px]">Email</th>
+                        <th v-if="showContributorTypes" scope="col" class="text-left px-2 py-2 text-xs font-semibold text-gray-600 dark:text-gray-300 w-32">Role</th>
+                        <th v-if="canDelete" class="w-16 px-2 py-2 text-xs font-semibold text-gray-600 dark:text-gray-300">Actions</th>
+                    </tr>
+                </thead>
 
-    <!-- <div v-if="checkedRows.length" class="p-3 bg-gray-100/50 dark:bg-slate-800">
+                <!-- Draggable tbody for non-paginated view -->
-		<span v-for="checkedRow in checkedRows" :key="checkedRow.id"
+                <draggable
-			class="inline-block px-2 py-1 rounded-sm mr-2 text-sm bg-gray-100 dark:bg-slate-700">
+                    v-if="canReorder && !hasMultiplePages"
-			{{ checkedRow.name }}
+                    tag="tbody"
-		</span>
+                    v-model="items"
-	</div> -->
+                    item-key="id"
+                    :disabled="!dragEnabled || isLoading"
+                    @end="handleDragEnd"
+                    handle=".drag-handle"
+                >
+                    <template #item="{ index, element }">
+                        <tr class="border-b border-gray-100 dark:border-slate-800 hover:bg-blue-50 dark:hover:bg-slate-800/70 transition-colors">
+                            <td v-if="canReorder" class="px-2 py-2">
+                                <div class="drag-handle cursor-move text-gray-400 hover:text-gray-600 dark:hover:text-gray-300">
+                                    <BaseIcon :path="mdiDragVariant" :size="18" />
+                                </div>
+                            </td>
+                            <td class="px-2 py-2 text-xs text-gray-600 dark:text-gray-400">{{ index + 1 }}</td>
 
-    <table>
+                            <!-- Name Type Selector -->
-        <thead>
+                            <td class="px-2 py-2">
-            <tr>
+                                <div class="flex items-center gap-1.5">
-                <!-- <th v-if="checkable" /> -->
+                                    <BaseIcon 
-                <th />
+                                        :path="element.name_type === 'Organizational' ? mdiDomain : mdiAccount" 
-                <th scope="col">Sort</th>
+                                        :size="16"
-                <th scope="col">Id</th>
+                                        :class="element.name_type === 'Organizational' ? 'text-purple-500' : 'text-blue-500'"
-                <!-- <th class="hidden lg:table-cell"></th> -->
+                                        :title="element.name_type"
-                <th>First Name</th>
+                                    />
-                <th>Last Name</th>
+                                    <FormControl
-                <th>Email</th>
+                                        required
-                <th scope="col" v-if="Object.keys(contributortypes).length">
+                                        v-model="element.name_type"
-                    <span>Type</span>
+                                        type="select"
-                </th>
+                                        :options="nameTypeOptions"
+                                        :is-read-only="element.status == true"
+                                        class="text-[8px] compact-select-mini flex-1"
+                                    />
+                                </div>
+                                <div class="text-red-500 text-[8px] mt-0.5" v-if="errors && Array.isArray(errors[`${relation}.${index}.name_type`])">
+                                    {{ errors[`${relation}.${index}.name_type`][0] }}
+                                </div>
+                            </td>
 
-                <!-- <th>Name Type</th> -->
+                            <!-- First Name - Only shown for Personal type -->
-                <!-- <th>Progress</th> -->
+                            <td class="px-2 py-2">
-                <!-- <th>Created</th> -->
+                                <FormControl
-                <th />
+                                    v-if="element.name_type !== 'Organizational'"
-            </tr>
+                                    required
-        </thead>
+                                    v-model="element.first_name"
-        <!-- <tbody> -->
+                                    type="text"
-        <!-- <tr v-for="(client, index) in itemsPaginated" :key="client.id"> -->
+                                    :is-read-only="element.status == true"
-        <draggable id="galliwasery" tag="tbody" v-model="items" item-key="id">
+                                    placeholder="First name"
-            <template #item="{ index, element }">
+                                    class="text-xs compact-input"
-                <tr>
+                                />
-                    <td class="drag-icon">
+                                <span v-else class="text-gray-400 text-xs italic">—</span>
-                        <BaseIcon :path="mdiDragVariant" />
+                                <div class="text-red-500 text-xs mt-0.5" v-if="errors && Array.isArray(errors[`${relation}.${index}.first_name`])">
-                    </td>
+                                    {{ errors[`${relation}.${index}.first_name`][0] }}
-                    <td scope="row">{{ index + 1 }}</td>
+                                </div>
-                    <td data-label="Id">{{ element.id }}</td>
+                            </td>
-                    <!-- <TableCheckboxCell v-if="checkable" @checked="checked($event, client)" /> -->
+
-                    <!-- <td v-if="element.name" class="border-b-0 lg:w-6 before:hidden hidden lg:table-cell">
+                            <!-- Last Name / Organization Name -->
-                        <UserAvatar :username="element.name" class="w-24 h-24 mx-auto lg:w-6 lg:h-6" />
+                            <td class="px-2 py-2">
-                    </td> -->
+                                <FormControl
-                    <td data-label="First Name">
+                                    required
-                        <!-- {{ element.first_name }} -->
+                                    v-model="element.last_name"
-                        <FormControl
+                                    type="text"
-                            required
+                                    :is-read-only="element.status == true"
-                            v-model="element.first_name"
+                                    :placeholder="element.name_type === 'Organizational' ? 'Organization' : 'Last name'"
-                            type="text"  :is-read-only="element.status==true"                 
+                                    class="text-xs compact-input"
-                            placeholder="[FIRST NAME]"
+                                />
-                        >
+                                <div class="text-red-500 text-xs mt-0.5" v-if="errors && Array.isArray(errors[`${relation}.${index}.last_name`])">
-                        <div
+                                    {{ errors[`${relation}.${index}.last_name`][0] }}
-                                class="text-red-400 text-sm"
+                                </div>
-                                v-if="errors && Array.isArray(errors[`${relation}.${index}.first_name`])"
+                            </td>
-                            >
+
-                                {{ errors[`${relation}.${index}.first_name`].join(', ') }}
+                            <!-- Orcid -->
+                            <td class="px-2 py-2">
+                                <FormControl
+                                    v-model="element.identifier_orcid"
+                                    type="text"
+                                    :is-read-only="element.status == true"
+                                    placeholder="0000-0000-0000-0000"
+                                    class="text-xs compact-input font-mono"
+                                />
+                                <div class="text-red-500 text-xs mt-0.5" v-if="errors && Array.isArray(errors[`${relation}.${index}.identifier_orcid`])">
+                                    {{ errors[`${relation}.${index}.identifier_orcid`][0] }}
+                                </div>
+                            </td>
+
+                            <!-- Email -->
+                            <td class="px-2 py-2">
+                                <FormControl
+                                    required
+                                    v-model="element.email"
+                                    type="email"
+                                    :is-read-only="element.status == true"
+                                    placeholder="email@example.com"
+                                    class="text-xs compact-input"
+                                />
+                                <div class="text-red-500 text-xs mt-0.5" v-if="errors && Array.isArray(errors[`${relation}.${index}.email`])">
+                                    {{ errors[`${relation}.${index}.email`][0] }}
+                                </div>
+                            </td>
+
+                            <!-- Contributor Type -->
+                            <td v-if="Object.keys(contributortypes).length" class="px-2 py-2">
+                                <FormControl
+                                    required
+                                    v-model="element.pivot_contributor_type"
+                                    type="select"
+                                    :options="contributortypes"
+                                    placeholder="Role"
+                                    class="text-xs compact-select"
+                                />
+                                <div
+                                    class="text-red-500 text-xs mt-0.5"
+                                    v-if="errors && Array.isArray(errors[`${relation}.${index}.pivot_contributor_type`])"
+                                >
+                                    {{ errors[`${relation}.${index}.pivot_contributor_type`][0] }}
+                                </div>
+                            </td>
+
+                            <!-- Actions -->
+                            <td class="px-2 py-2 whitespace-nowrap">
+                                <BaseButton 
+                                    color="danger" 
+                                    :icon="mdiTrashCan" 
+                                    small 
+                                    @click.prevent="removeAuthor(index)"
+                                    class="compact-button"
+                                />
+                            </td>
+                        </tr>
+                    </template>
+                </draggable>
+
+                <!-- Non-draggable tbody for paginated view -->
+                <tbody v-else>
+                    <tr
+                        v-for="(element, index) in itemsPaginated"
+                        :key="element.id || index"
+                        class="border-b border-gray-100 dark:border-slate-800 hover:bg-blue-50 dark:hover:bg-slate-800/70 transition-colors"
+                    >
+                        <td   v-if="canReorder" class="px-2 py-2 text-gray-400">
+                            <BaseIcon :path="mdiDragVariant" :size="18" />
+                        </td>
+                        <td class="px-2 py-2 text-xs text-gray-600 dark:text-gray-400">{{ currentPage * perPage + index + 1 }}</td>
+
+                        <!-- Name Type Selector -->
+                        <td class="px-2 py-2">
+                            <BaseIcon 
+                                        :path="element.name_type === 'Organizational' ? mdiDomain : mdiAccount" 
+                                        :size="16"
+                                        :class="element.name_type === 'Organizational' ? 'text-purple-500' : 'text-blue-500'"
+                                        :title="element.name_type"
+                                    />
+                            <FormControl
+                                required
+                                :model-value="element.name_type"                              
+                                @update:model-value="updatePerson(index, 'name_type', $event)"
+                                type="select"
+                                :options="nameTypeOptions"
+                                :is-read-only="element.status || !canEdit"
+                                class="text-xs compact-select"
+                                :error="getFieldError(index, 'name_type')"
+                            />
+                            <div v-if="getFieldError(index, 'name_type')" class="text-red-500 text-xs mt-0.5">
+                                {{ getFieldError(index, 'name_type') }}
                             </div>
-                        </FormControl>
+                        </td>
-                    </td>
+
-                    <td data-label="Last Name">                       
+                        <!-- First Name -->
-                        <FormControl
+                        <td class="px-2 py-2">
-                            required
+                            <FormControl
-                            v-model="element.last_name"
+                                v-if="element.name_type !== 'Organizational'"
-                            type="text"  :is-read-only="element.status==true"                 
+                                required
-                            placeholder="[LAST NAME]"
+                                :model-value="element.first_name"
-                        >
+                                @update:model-value="updatePerson(index, 'first_name', $event)"
-                        <div
+                                type="text"
-                                class="text-red-400 text-sm"
+                                :is-read-only="element.status || !canEdit"
-                                v-if="errors && Array.isArray(errors[`${relation}.${index}.last_name`])"
+                                placeholder="First name"
-                            >
+                                class="text-xs compact-input"
-                                {{ errors[`${relation}.${index}.last_name`].join(', ') }}
+                                :error="getFieldError(index, 'first_name')"
+                            />
+                            <span v-else class="text-gray-400 text-xs italic">—</span>
+                            <div v-if="getFieldError(index, 'first_name')" class="text-red-500 text-xs mt-0.5">
+                                {{ getFieldError(index, 'first_name') }}
                             </div>
-                        </FormControl>
+                        </td>
-                    </td>
+
-                    <td data-label="Email">                      
+                        <!-- Last Name / Organization -->
-                        <FormControl
+                        <td class="px-2 py-2">
-                            required
+                            <FormControl
-                            v-model="element.email"
+                                required
-                            type="text"  :is-read-only="element.status==true"                 
+                                :model-value="element.last_name"
-                            placeholder="[EMAIL]"
+                                @update:model-value="updatePerson(index, 'last_name', $event)"
-                        >
+                                type="text"
-                        <div
+                                :is-read-only="element.status || !canEdit"
-                                class="text-red-400 text-sm"
+                                :placeholder="element.name_type === 'Organizational' ? 'Organization' : 'Last name'"
-                                v-if="errors && Array.isArray(errors[`${relation}.${index}.email`])"
+                                class="text-xs compact-input"
-                            >
+                                :error="getFieldError(index, 'last_name')"
-                                {{ errors[`${relation}.${index}.email`].join(', ') }}
+                            />
+                            <div v-if="getFieldError(index, 'last_name')" class="text-red-500 text-xs mt-0.5">
+                                {{ getFieldError(index, 'last_name') }}
                             </div>
-                        </FormControl>
+                        </td>
-                    </td>
+
-                    <td v-if="Object.keys(contributortypes).length">
+                        <!-- Orcid -->
-                        <!-- <select type="text" v-model="element.pivot.contributor_type">
+                        <td class="px-2 py-2">
-                            <option v-for="(option, i) in contributortypes" :value="option" :key="i">
+                            <FormControl
-                                {{ option }}
+                                :model-value="element.identifier_orcid"
-                            </option>
+                                @update:model-value="updatePerson(index, 'identifier_orcid', $event)"
-                        </select> -->
+                                type="text"
-                        <FormControl
+                                :is-read-only="element.status || !canEdit"
-                            required
+                                placeholder="0000-0000-0000-0000"
-                            v-model="element.pivot_contributor_type"
+                                class="text-xs compact-input font-mono"
-                            type="select"
+                                :error="getFieldError(index, 'identifier_orcid')"
-                            :options="contributortypes" 
+                            />
-                            placeholder="[relation type]"
+                            <div v-if="getFieldError(index, 'identifier_orcid')" class="text-red-500 text-xs mt-0.5">
-                        >
+                                {{ getFieldError(index, 'identifier_orcid') }}
-                            <div
-                                class="text-red-400 text-sm"
-                                v-if="errors && Array.isArray(errors[`${relation}.${index}.pivot_contributor_type`])"
-                            >
-                                {{ errors[`${relation}.${index}.pivot_contributor_type`].join(', ') }}
                             </div>
-                        </FormControl>
+                        </td>
-                    </td>
+
-                    <!-- <td data-label="Name Type">
+                        <!-- Email -->
-                    {{ client.name_type }}
+                        <td class="px-2 py-2">
-                </td> -->
+                            <FormControl
-                    <!-- <td data-label="Orcid">
+                                required
-                    {{ client.identifier_orcid }}
+                                :model-value="element.email"
-                </td> -->
+                                @update:model-value="updatePerson(index, 'email', $event)"
-                    <!-- <td data-label="Progress" class="lg:w-32">
+                                type="email"
-					<progress class="flex w-2/5 self-center lg:w-full" max="100" v-bind:value="client.progress">
+                                :is-read-only="element.status || !canEdit"
-						{{ client.progress }}
+                                placeholder="email@example.com"
-					</progress>
+                                class="text-xs compact-input"
-				</td> -->
+                                :error="getFieldError(index, 'email')"
-                    <td class="before:hidden lg:w-1 whitespace-nowrap">
+                            />
-                        <BaseButtons type="justify-start lg:justify-end" no-wrap>
+                            <div v-if="getFieldError(index, 'email')" class="text-red-500 text-xs mt-0.5">
-                            <!-- <BaseButton color="info" :icon="mdiEye" small @click="isModalActive = true" /> -->
+                                {{ getFieldError(index, 'email') }}
-                            <BaseButton color="danger" :icon="mdiTrashCan" small @click.prevent="removeAuthor(index)" />
+                            </div>
-                        </BaseButtons>
+                        </td>
-                    </td>
+
-                </tr>
+                        <!-- Contributor Type -->
-            </template>
+                        <td v-if="showContributorTypes" class="px-2 py-2">
-        </draggable>
+                            <FormControl
-        <!-- </tbody> -->
+                                required
-    </table>
+                                :model-value="element.pivot_contributor_type"
-    <!-- :class="[ pagesList.length > 1 ? 'block' : 'hidden']" -->
+                                @update:model-value="updatePerson(index, 'pivot_contributor_type', $event)"
-    <div class="p-3 lg:px-6 border-t border-gray-100 dark:border-slate-800">
+                                type="select"
-        <!-- <BaseLevel>
+                                :options="contributortypes"
-            <BaseButtons>
+                                :is-read-only="element.status || !canEdit"
+                                placeholder="Role"
+                                class="text-xs compact-select"
+                                :error="getFieldError(index, 'pivot_contributor_type')"
+                            />
+                            <div v-if="getFieldError(index, 'pivot_contributor_type')" class="text-red-500 text-xs mt-0.5">
+                                {{ getFieldError(index, 'pivot_contributor_type') }}
+                            </div>
+                        </td>
+
+                        <!-- Actions -->
+                        <td v-if="canDelete" class="px-2 py-2 whitespace-nowrap">
+                            <BaseButton
+                                color="danger"
+                                :icon="mdiTrashCan"
+                                small
+                                @click="removeAuthor(index)"
+                                :disabled="element.status || !canEdit"
+                                title="Remove person"
+                                class="compact-button"
+                            />
+                        </td>
+                    </tr>
+
+                    <!-- Empty State -->
+                    <!-- <tr v-if="items.length === 0">
+                        <td :colspan="showContributorTypes ? 9 : 8" class="text-center py-12 text-gray-400">
+                            <div class="flex flex-col items-center gap-2">
+                                <BaseIcon :path="mdiBookOpenPageVariant" :size="32" class="text-gray-300" />
+                                <span class="text-sm">No persons added yet</span>
+                            </div>
+                        </td>
+                    </tr>
+                </tbody>-if="canDelete" class="p-3">
+                            <BaseButtons type="justify-start lg:justify-end" no-wrap>
+                                <BaseButton
+                                    color="danger"
+                                    :icon="mdiTrashCan"
+                                    small
+                                    @click="removeAuthor(index)"
+                                    :disabled="element.status || !canEdit"
+                                    title="Remove person"
+                                />
+                            </BaseButtons>
+                        </td>
+                    </tr>
+
+                   
+                    <tr v-if="items.length === 0">
+                        <td :colspan="showContributorTypes ? 10 : 9" class="text-center p-8 text-gray-500">
+                            No persons added yet
+                        </td>
+                    </tr> -->
+                </tbody>
+            </table>
+        </div>
+
+        <!-- Pagination -->
+        <div v-if="hasMultiplePages" class="flex justify-between items-center p-3 border-t border-gray-200 dark:border-slate-700">
+            <div class="flex gap-1">
+                <BaseButton :disabled="currentPage === 0" @click="goToPage(currentPage - 1)" :icon="mdiChevronLeft" small outline />
+
+                <template v-for="(page, i) in pagesList" :key="i">
+                    <span v-if="page === -1" class="px-3 py-1">...</span>
+                    <BaseButton
+                        v-else
+                        @click="goToPage(page)"
+                        :label="String(page + 1)"
+                        :color="page === currentPage ? 'info' : 'whiteDark'"
+                        small
+                        :outline="page !== currentPage"
+                    />
+                </template>
+
                 <BaseButton
-                    v-for="page in pagesList"
+                    :disabled="currentPage >= numPages - 1"
-                    :key="page"
+                    @click="goToPage(currentPage + 1)"
-                    :active="page === currentPage"
+                    :icon="mdiChevronRight"
-                    :label="page + 1"
                     small
-                    :outline="styleService.darkMode"
+                    outline
-                    @click="currentPage = page"
                 />
-            </BaseButtons>
+            </div>
-            <small>Page {{ currentPageHuman }} of {{ numPages }}</small>
+
-        </BaseLevel> -->
+            <span class="text-sm text-gray-600 dark:text-gray-400">
+                Page {{ currentPageHuman }} of {{ numPages }}
+            </span>
+        </div>
     </div>
 </template>
+
+<style lang="postcss" scoped>
+.drag-handle {
+    transition: color 0.2s;
+}
+
+.card {
+    @apply bg-white dark:bg-slate-900 rounded-lg shadow-sm;
+}
+
+@media (max-width: 768px) {
+    table {
+        font-size: 0.875rem;
+    }
+
+    th,
+    td {
+        padding: 0.5rem !important;
+    }
+}
+</style>

resources/js/Components/UnsavedChangesWarning.vue

@@ -0,0 +1,287 @@
+<template>
+    <Transition
+        enter-active-class="transition ease-out duration-300"
+        enter-from-class="opacity-0 transform -translate-y-2"
+        enter-to-class="opacity-100 transform translate-y-0"
+        leave-active-class="transition ease-in duration-200"
+        leave-from-class="opacity-100 transform translate-y-0"
+        leave-to-class="opacity-0 transform -translate-y-2"
+    >
+        <div v-if="show" class="mb-4 p-4 bg-amber-50 border border-amber-200 rounded-lg shadow-sm" role="alert" aria-live="polite">
+            <div class="flex items-start">
+                <div class="flex-shrink-0">
+                    <WarningTriangleIcon class="h-5 w-5 text-amber-500" aria-hidden="true" />
+                </div>
+
+                <div class="ml-3 flex-1">
+                    <h3 class="text-sm font-medium text-amber-800">
+                        {{ title }}
+                    </h3>
+                    <div class="mt-1 text-sm text-amber-700">
+                        <p>{{ message }}</p>
+
+                        <!-- Optional detailed list of changes -->
+                        <div v-if="showDetails && changesSummary.length > 0" class="mt-2">
+                            <button
+                                type="button"
+                                @click.stop="toggleDetails"
+                                class="text-amber-800 underline hover:text-amber-900 focus:outline-none focus:ring-2 focus:ring-amber-500 focus:ring-offset-2 focus:ring-offset-amber-50 rounded"
+                            >
+                                {{ detailsVisible ? 'Hide details' : 'Show details' }}
+                            </button>
+
+                            <Transition
+                                enter-active-class="transition ease-out duration-200"
+                                enter-from-class="opacity-0 max-h-0"
+                                enter-to-class="opacity-100 max-h-40"
+                                leave-active-class="transition ease-in duration-150"
+                                leave-from-class="opacity-100 max-h-40"
+                                leave-to-class="opacity-0 max-h-0"
+                            >
+                                <div v-if="detailsVisible" class="mt-2 overflow-hidden">
+                                    <ul class="text-xs text-amber-600 space-y-1">
+                                        <li v-for="change in changesSummary" :key="change" class="flex items-center">
+                                            <div class="w-1 h-1 bg-amber-400 rounded-full mr-2"></div>
+                                            {{ change }}
+                                        </li>
+                                    </ul>
+                                </div>
+                            </Transition>
+                        </div>
+                    </div>
+                </div>
+
+                <!-- Action buttons -->
+                <div v-if="showActions" class="ml-4 flex-shrink-0 flex space-x-2">
+                    <button
+                        v-if="onSave"
+                        type="button"
+                        @click.stop="handleSave"
+                        :disabled="isSaving"
+                        class="bg-amber-100 text-amber-800 px-3 py-1 rounded text-sm font-medium hover:bg-amber-200 focus:outline-none focus:ring-2 focus:ring-amber-500 focus:ring-offset-2 focus:ring-offset-amber-50 disabled:opacity-50 disabled:cursor-not-allowed transition-colors"
+                    >
+                        <span v-if="!isSaving">Save Now</span>
+                        <span v-else class="flex items-center">
+                            <LoadingSpinner class="w-3 h-3 mr-1" />
+                            Saving...
+                        </span>
+                    </button>
+
+                    <button
+                        v-if="onDismiss"
+                        type="button"
+                        @click="handleDismiss"
+                        class="text-amber-600 hover:text-amber-700 focus:outline-none focus:ring-2 focus:ring-amber-500 focus:ring-offset-2 focus:ring-offset-amber-50 rounded p-1"
+                        :title="dismissLabel"
+                    >
+                        <XMarkIcon class="h-4 w-4" aria-hidden="true" />
+                        <span class="sr-only">{{ dismissLabel }}</span>
+                    </button>
+                </div>
+            </div>
+
+            <!-- Progress indicator for auto-save -->
+            <div v-if="showAutoSaveProgress && autoSaveCountdown > 0" class="mt-3">
+                <div class="flex items-center justify-between text-xs text-amber-600">
+                    <span>Auto-save in {{ autoSaveCountdown }}s</span>
+                    <button @click="cancelAutoSave" class="underline hover:text-amber-700">Cancel</button>
+                </div>
+                <div class="mt-1 w-full bg-amber-200 rounded-full h-1">
+                    <div
+                        class="bg-amber-500 h-1 rounded-full transition-all duration-1000 ease-linear"
+                        :style="{ width: `${((initialCountdown - autoSaveCountdown) / initialCountdown) * 100}%` }"
+                    ></div>
+                </div>
+            </div>
+        </div>
+    </Transition>
+</template>
+
+<script setup lang="ts">
+import { ref, computed, onMounted, onUnmounted, watch, defineComponent } from 'vue';
+
+// Icons - you can replace these with your preferred icon library
+const WarningTriangleIcon = defineComponent({
+    template: `
+    <svg viewBox="0 0 20 20" fill="currentColor">
+      <path fill-rule="evenodd" d="M8.257 3.099c.765-1.36 2.722-1.36 3.486 0l5.58 9.92c.75 1.334-.213 2.98-1.742 2.98H4.42c-1.53 0-2.493-1.646-1.743-2.98l5.58-9.92zM11 13a1 1 0 11-2 0 1 1 0 012 0zm-1-8a1 1 0 00-1 1v3a1 1 0 002 0V6a1 1 0 00-1-1z" clip-rule="evenodd" />
+    </svg>
+  `,
+});
+
+const XMarkIcon = defineComponent({
+    template: `
+    <svg viewBox="0 0 20 20" fill="currentColor">
+      <path d="M6.28 5.22a.75.75 0 00-1.06 1.06L8.94 10l-3.72 3.72a.75.75 0 101.06 1.06L10 11.06l3.72 3.72a.75.75 0 101.06-1.06L11.06 10l3.72-3.72a.75.75 0 00-1.06-1.06L10 8.94 6.28 5.22z" />
+    </svg>
+  `,
+});
+
+const LoadingSpinner = defineComponent({
+    template: `
+    <svg class="animate-spin" fill="none" viewBox="0 0 24 24">
+      <circle class="opacity-25" cx="12" cy="12" r="10" stroke="currentColor" stroke-width="4"></circle>
+      <path class="opacity-75" fill="currentColor" d="M4 12a8 8 0 018-8V0C5.373 0 0 5.373 0 12h4zm2 5.291A7.962 7.962 0 014 12H0c0 3.042 1.135 5.824 3 7.938l3-2.647z"></path>
+    </svg>
+  `,
+});
+
+interface Props {
+    // Control visibility
+    show?: boolean;
+
+    // Content
+    title?: string;
+    message?: string;
+    changesSummary?: string[];
+
+    // Behavior
+    showDetails?: boolean;
+    showActions?: boolean;
+    showAutoSaveProgress?: boolean;
+    autoSaveDelay?: number; // seconds
+
+    // Callbacks
+    onSave?: () => Promise<void> | void;
+    onDismiss?: () => void;
+    onAutoSave?: () => Promise<void> | void;
+
+    // Labels
+    dismissLabel?: string;
+}
+
+const props = withDefaults(defineProps<Props>(), {
+    show: true,
+    title: 'You have unsaved changes',
+    message: 'Your changes will be lost if you leave this page without saving.',
+    changesSummary: () => [],
+    showDetails: false,
+    showActions: true,
+    showAutoSaveProgress: false,
+    autoSaveDelay: 30,
+    dismissLabel: 'Dismiss warning',
+});
+
+const emit = defineEmits<{
+    save: [];
+    dismiss: [];
+    autoSave: [];
+}>();
+
+// Local state
+const detailsVisible = ref(false);
+const isSaving = ref(false);
+const autoSaveCountdown = ref(0);
+const initialCountdown = ref(0);
+let autoSaveTimer: NodeJS.Timeout | null = null;
+let countdownTimer: NodeJS.Timeout | null = null;
+
+// Methods
+const toggleDetails = () => {
+    detailsVisible.value = !detailsVisible.value;
+};
+
+const handleSave = async () => {
+    if (isSaving.value) return;
+
+    try {
+        isSaving.value = true;
+        await props.onSave?.();
+        emit('save');
+    } catch (error) {
+        console.error('Save failed:', error);
+        // You might want to emit an error event here
+    } finally {
+        isSaving.value = false;
+    }
+};
+
+const handleDismiss = () => {
+    props.onDismiss?.();
+    emit('dismiss');
+    stopAutoSave();
+};
+
+const startAutoSave = () => {
+    if (!props.onAutoSave || autoSaveTimer) return;
+
+    autoSaveCountdown.value = props.autoSaveDelay;
+    initialCountdown.value = props.autoSaveDelay;
+
+    // Countdown timer
+    countdownTimer = setInterval(() => {
+        autoSaveCountdown.value--;
+
+        if (autoSaveCountdown.value <= 0) {
+            executeAutoSave();
+        }
+    }, 1000);
+};
+
+const executeAutoSave = async () => {
+    stopAutoSave();
+
+    try {
+        await props.onAutoSave?.();
+        emit('autoSave');
+    } catch (error) {
+        console.error('Auto-save failed:', error);
+        // Optionally restart auto-save on failure
+        if (props.show) {
+            startAutoSave();
+        }
+    }
+};
+
+const cancelAutoSave = () => {
+    stopAutoSave();
+};
+
+const stopAutoSave = () => {
+    if (autoSaveTimer) {
+        clearTimeout(autoSaveTimer);
+        autoSaveTimer = null;
+    }
+
+    if (countdownTimer) {
+        clearInterval(countdownTimer);
+        countdownTimer = null;
+    }
+
+    autoSaveCountdown.value = 0;
+};
+
+// Watchers
+watch(
+    () => props.show,
+    (newShow) => {
+        if (newShow && props.showAutoSaveProgress && props.onAutoSave) {
+            startAutoSave();
+        } else if (!newShow) {
+            stopAutoSave();
+        }
+    },
+);
+
+// Lifecycle
+onMounted(() => {
+    if (props.show && props.showAutoSaveProgress && props.onAutoSave) {
+        startAutoSave();
+    }
+});
+
+onUnmounted(() => {
+    stopAutoSave();
+});
+</script>
+
+<style scoped>
+/* Additional custom styles if needed */
+.max-h-0 {
+    max-height: 0;
+}
+
+.max-h-40 {
+    max-height: 10rem;
+}
+</style>

resources/js/Dataset.ts

@@ -132,13 +132,25 @@ export interface Description {
 
 export interface Person {
     id?: number;
-    name?: string;
+    // Name fields
+    first_name?: string;
+    last_name?: string;  // Also used for organization name
+    name?: string;       // Alternative full name field
     email: string;
     name_type?: string;
+   // Additional identifiers
     identifier_orcid?: string;
-    datasetCount?: string;
+    
+    // Status and metadata
+    status: boolean;     // true = read-only/locked, false = editable
     created_at?: string;
-    status: boolean;
+    updated_at?: string;
+    
+    // Statistics
+    datasetCount?: string;
+    
+    // Relationship data (for many-to-many relationships)
+    pivot_contributor_type?: string;  // Type of contribution (e.g., 'Author', 'Editor', 'Contributor')  
 }
 
 interface IErrorMessage {

resources/js/Layouts/LayoutAuthenticated.vue

@@ -14,11 +14,11 @@ const props = defineProps({
     showAsideMenu: {
       type: Boolean,
       default: true // Set default value to true
+    },
+    hasProgressBar: {
+      type: Boolean,
+      default: false // New prop to indicate if progress bar is shown
     }
-	// user: {
-	// 	type: Object,
-	// 	default: () => ({}),
-	// }
 });
 </script>
 
@@ -29,9 +29,18 @@ const props = defineProps({
     }">
         <div :class="{ 
             'ml-60 lg:ml-0': layoutService.isAsideMobileExpanded,
-            'xl:pl-60': props.showAsideMenu==true }"
+            'xl:pl-60': props.showAsideMenu==true,
-            class="pt-14  min-h-screen w-screen transition-position lg:w-auto bg-gray-50 dark:bg-slate-800 dark:text-slate-100">
+            'pt-14': !props.hasProgressBar,
-            <NavBar :class="{ 'ml-60 lg:ml-0': layoutService.isAsideMobileExpanded }" :showBurger="props.showAsideMenu" />
+            'pt-24': props.hasProgressBar // Increased padding when progress bar is present (pt-14 + height of progress bar)
+        }"
+            class="min-h-screen w-screen transition-position lg:w-auto bg-gray-50 dark:bg-slate-800 dark:text-slate-100">
+            <NavBar 
+                :class="{ 
+                    'ml-60 lg:ml-0': layoutService.isAsideMobileExpanded,
+                    'top-10': props.hasProgressBar // Push NavBar down when progress bar is present
+                }" 
+                :showBurger="props.showAsideMenu" 
+            />
             <!-- Conditionally render AsideMenu based on showAsideMenu prop -->
             <template v-if="showAsideMenu">
                 <AsideMenu />

resources/js/Pages/Admin/License/Index.vue

@@ -1,6 +1,6 @@
 <script lang="ts" setup>
-import { usePage } from '@inertiajs/vue3';
+import { Head, usePage } from '@inertiajs/vue3';
-import { mdiAccountKey, mdiSquareEditOutline, mdiAlertBoxOutline } from '@mdi/js';
+import { mdiLicense, mdiCheckCircle, mdiCloseCircle, mdiAlertBoxOutline } from '@mdi/js';
 import { computed, ComputedRef } from 'vue';
 import LayoutAuthenticated from '@/Layouts/LayoutAuthenticated.vue';
 import SectionMain from '@/Components/SectionMain.vue';
@@ -9,107 +9,150 @@ import BaseButton from '@/Components/BaseButton.vue';
 import CardBox from '@/Components/CardBox.vue';
 import BaseButtons from '@/Components/BaseButtons.vue';
 import NotificationBar from '@/Components/NotificationBar.vue';
-// import Pagination from '@/Components/Admin/Pagination.vue';
-// import Sort from '@/Components/Admin/Sort.vue';
 import { stardust } from '@eidellev/adonis-stardust/client';
-// import CardBoxModal from '@/Components/CardBoxModal.vue';
 
-// const isModalDangerActive = ref(false);
+interface License {
-// const deleteId = ref();
+    id: number;
+    name: string;
+    sort_order: number;
+    active: boolean;
+}
 
-defineProps({
+const props = defineProps({
     licenses: {
-        type: Object,
+        type: Array<License>,
-        default: () => ({}),
+        default: () => [],
     },
-    // filters: {
-    //     type: Object,
-    //     default: () => ({}),
-    // },
     can: {
         type: Object,
         default: () => ({}),
     },
 });
 
-const flash: ComputedRef<any> = computed(() => {
+const flash: ComputedRef<any> = computed(() => usePage().props.flash);
-    // let test = usePage();
-    // console.log(test);
-    return usePage().props.flash;
-});
 
+const licenseCount = computed(() => props.licenses.length);
 
+const getLicenseColor = (index: number) => {
+    const colors = [
+        'bg-emerald-100 text-emerald-800 dark:bg-emerald-900 dark:text-emerald-300',
+        'bg-blue-100 text-blue-800 dark:bg-blue-900 dark:text-blue-300',
+        'bg-violet-100 text-violet-800 dark:bg-violet-900 dark:text-violet-300',
+        'bg-amber-100 text-amber-800 dark:bg-amber-900 dark:text-amber-300',
+        'bg-rose-100 text-rose-800 dark:bg-rose-900 dark:text-rose-300',
+        'bg-cyan-100 text-cyan-800 dark:bg-cyan-900 dark:text-cyan-300',
+    ];
+    return colors[index % colors.length];
+};
 </script>
 
 <template>
-
     <LayoutAuthenticated>
-
         <Head title="Licenses" />
         <SectionMain>
-            <SectionTitleLineWithButton :icon="mdiAccountKey" title="Licenses" main>
+            <SectionTitleLineWithButton :icon="mdiLicense" title="Licenses" main>
-                <!-- <BaseButton
+                <div class="flex items-center gap-3">
-                    v-if="can.create"
+                    <span class="text-sm text-gray-500 dark:text-gray-400 font-medium">
-                    :route-name="stardust.route('settings.role.create')"
+                        {{ licenseCount }} {{ licenseCount === 1 ? 'license' : 'licenses' }}
-                    :icon="mdiPlus"
+                    </span>
-                    label="Add"
+                </div>
-                    color="info"
-                    rounded-full
-                    small
-                /> -->
             </SectionTitleLineWithButton>
+
             <NotificationBar v-if="flash.message" color="success" :icon="mdiAlertBoxOutline">
                 {{ flash.message }}
             </NotificationBar>
+
             <CardBox class="mb-6" has-table>
-            </CardBox>
-            <CardBox class="mb-6" has-form-data>
                 <table>
                     <thead>
                         <tr>
-                            <th>
+                            <th>Name</th>
-                                <!-- <Sort label="Name" attribute="name" /> -->
+                            <th>Sort Order</th>
-                                Name
+                            <th>Status</th>
-                            </th>
-                            <th>
-                                <!-- <Sort label="Sort Order" attribute="sort_order" /> -->
-                                Sort Order
-                            </th>
                             <th v-if="can.edit">Actions</th>
-
                         </tr>
                     </thead>
 
                     <tbody>
-                        <tr v-for="license in licenses" :key="license.id">
+                        <tr v-if="licenses.length === 0">
+                            <td colspan="4" class="text-center py-12">
+                                <div class="flex flex-col items-center justify-center text-gray-500 dark:text-gray-400">
+                                    <p class="text-lg font-medium mb-2">No licenses found</p>
+                                    <p class="text-sm">Licenses will appear here once configured</p>
+                                </div>
+                            </td>
+                        </tr>
+                        <tr
+                            v-for="(license, index) in licenses"
+                            :key="license.id"
+                            class="hover:bg-gray-50 dark:hover:bg-slate-800 transition-colors"
+                        >
                             <td data-label="Name">
-                                <!-- <Link
+                                <span
-                                    :href="stardust.route('settings.role.show', [role.id])"
+                                    class="inline-flex items-center px-3 py-1 rounded-full text-sm font-medium transition-all hover:shadow-md"
-                                    class="no-underline hover:underline text-cyan-600 dark:text-cyan-400"
+                                    :class="getLicenseColor(index)"
                                 >
                                     {{ license.name }}
-                                </Link> -->
+                                </span>
-                                {{ license.name }}
                             </td>
-                            <td data-label="Description">
+                            <td data-label="Sort Order">
-                                {{ license.sort_order }}
+                                <span
+                                    class="inline-flex items-center justify-center w-8 h-8 rounded-full bg-gray-100 dark:bg-slate-700 text-gray-700 dark:text-gray-300 font-semibold text-sm"
+                                >
+                                    {{ license.sort_order }}
+                                </span>
+                            </td>
+                            <td data-label="Status">
+                                <span
+                                    v-if="license.active"
+                                    class="inline-flex items-center gap-1 px-2.5 py-1 rounded-full text-xs font-medium bg-green-100 text-green-800 dark:bg-green-900 dark:text-green-300"
+                                >
+                                    <svg class="w-4 h-4" fill="currentColor" viewBox="0 0 20 20">
+                                        <path
+                                            fill-rule="evenodd"
+                                            d="M10 18a8 8 0 100-16 8 8 0 000 16zm3.707-9.293a1 1 0 00-1.414-1.414L9 10.586 7.707 9.293a1 1 0 00-1.414 1.414l2 2a1 1 0 001.414 0l4-4z"
+                                            clip-rule="evenodd"
+                                        />
+                                    </svg>
+                                    Active
+                                </span>
+                                <span
+                                    v-else
+                                    class="inline-flex items-center gap-1 px-2.5 py-1 rounded-full text-xs font-medium bg-gray-100 text-gray-800 dark:bg-gray-800 dark:text-gray-300"
+                                >
+                                    <svg class="w-4 h-4" fill="currentColor" viewBox="0 0 20 20">
+                                        <path
+                                            fill-rule="evenodd"
+                                            d="M10 18a8 8 0 100-16 8 8 0 000 16zM8.707 7.293a1 1 0 00-1.414 1.414L8.586 10l-1.293 1.293a1 1 0 101.414 1.414L10 11.414l1.293 1.293a1 1 0 001.414-1.414L11.414 10l1.293-1.293a1 1 0 00-1.414-1.414L10 8.586 8.707 7.293z"
+                                            clip-rule="evenodd"
+                                        />
+                                    </svg>
+                                    Inactive
+                                </span>
                             </td>
-
                             <td v-if="can.edit" class="before:hidden lg:w-1 whitespace-nowrap">
                                 <BaseButtons type="justify-start lg:justify-end" no-wrap>
-                                    <BaseButton v-if="license.active"
+                                    <BaseButton
+                                        v-if="license.active"
                                         :route-name="stardust.route('settings.license.down', [license.id])"
-                                        color="warning" :icon="mdiSquareEditOutline" label="deactivate" small />
+                                        color="warning"
-                                    <BaseButton v-else :route-name="stardust.route('settings.license.up', [license.id])"
+                                        :icon="mdiCloseCircle"
-                                        color="success" :icon="mdiSquareEditOutline" label="activate" small />
+                                        label="Deactivate"
+                                        small
+                                    />
+                                    <BaseButton
+                                        v-else
+                                        :route-name="stardust.route('settings.license.up', [license.id])"
+                                        color="success"
+                                        :icon="mdiCheckCircle"
+                                        label="Activate"
+                                        small
+                                    />
                                 </BaseButtons>
                             </td>
                         </tr>
                     </tbody>
                 </table>
-                <!-- <div class="py-4">
-					<Pagination v-bind:data="roles.meta" />
-				</div> -->
             </CardBox>
         </SectionMain>
     </LayoutAuthenticated>

resources/js/Pages/Admin/Project/Create.vue

@@ -0,0 +1,135 @@
+<script lang="ts" setup>
+import { Head, useForm } from '@inertiajs/vue3';
+import { mdiFolderPlus, mdiArrowLeftBoldOutline, mdiFormTextarea, mdiContentSave } from '@mdi/js';
+import LayoutAuthenticated from '@/Layouts/LayoutAuthenticated.vue';
+import SectionMain from '@/Components/SectionMain.vue';
+import SectionTitleLineWithButton from '@/Components/SectionTitleLineWithButton.vue';
+import CardBox from '@/Components/CardBox.vue';
+import FormField from '@/Components/FormField.vue';
+import FormControl from '@/Components/FormControl.vue';
+import BaseButton from '@/Components/BaseButton.vue';
+import BaseButtons from '@/Components/BaseButtons.vue';
+import { stardust } from '@eidellev/adonis-stardust/client';
+
+const form = useForm({
+    label: '',
+    name: '',
+    description: '',
+});
+
+const submit = async () => {
+    await form.post(stardust.route('settings.project.store'));
+};
+</script>
+
+<template>
+    <LayoutAuthenticated>
+        <Head title="Create New Project" />
+        <SectionMain>
+            <SectionTitleLineWithButton :icon="mdiFolderPlus" title="Create New Project" main>
+                <BaseButton
+                    :route-name="stardust.route('settings.project.index')"
+                    :icon="mdiArrowLeftBoldOutline"
+                    label="Back"
+                    color="white"
+                    rounded-full
+                    small
+                />
+            </SectionTitleLineWithButton>
+
+            <CardBox form @submit.prevent="submit()" class="shadow-lg">
+                <div class="grid grid-cols-1 gap-6">
+                    <FormField label="Label"  help="Lowercase letters, numbers, and hyphens only" :class="{ 'text-red-400': form.errors.label }">
+                        <FormControl
+                            v-model="form.label"                           
+                            type="text"
+                            placeholder="e.g., my-awesome-project"                           
+                            required
+                            :error="form.errors.label"
+                            class="transition-all focus:ring-2 focus:ring-blue-500"
+                        >
+                            <div class="text-red-400 text-sm mt-1" v-if="form.errors.label">
+                                {{ form.errors.label }}
+                            </div>
+                        </FormControl>
+                    </FormField>
+
+                    <FormField
+                        label="Name"
+                        help="Required. Project title shown to users"
+                        :class="{ 'text-red-400': form.errors.name }"
+                    >
+                        <FormControl
+                            v-model="form.name"
+                            type="text"
+                            placeholder="Enter a descriptive titel..."
+                            required
+                            :error="form.errors.name"
+                            class="font-mono transition-all focus:ring-2 focus:ring-blue-500"
+                        >
+                            <div class="text-red-400 text-sm mt-1" v-if="form.errors.name">
+                                {{ form.errors.name }}
+                            </div>
+                        </FormControl>
+                    </FormField>
+
+                    <FormField
+                        label="Description"
+                        help="Optional. Detailed description of the project"
+                        :class="{ 'text-red-400': form.errors.description }"
+                    >
+                        <FormControl
+                            v-model="form.description"
+                            :icon="mdiFormTextarea"
+                            name="description"
+                            type="textarea"
+                            placeholder="Describe what this project is about..."
+                            :error="form.errors.description"
+                            class="transition-all focus:ring-2 focus:ring-blue-500"
+                        >
+                            <div class="text-red-400 text-sm mt-1" v-if="form.errors.description">
+                                {{ form.errors.description }}
+                            </div>
+                        </FormControl>
+                    </FormField>
+                </div>
+
+                <template #footer>
+                    <BaseButtons class="justify-between">
+                        <BaseButton :route-name="stardust.route('settings.project.index')" label="Cancel" color="white" outline />
+                        <BaseButton
+                            type="submit"
+                            color="info"
+                            :icon="mdiContentSave"
+                            label="Create Project"
+                            :class="{ 'opacity-25': form.processing }"
+                            :disabled="form.processing"
+                            class="transition-all hover:shadow-lg"
+                        />
+                    </BaseButtons>
+                </template>
+            </CardBox>
+
+            <!-- Helper Card -->
+            <CardBox
+                class="mt-6 bg-gradient-to-br from-blue-50 to-indigo-50 dark:from-slate-800 dark:to-slate-900 border-l-4 border-blue-500"
+            >
+                <div class="flex items-start gap-4">
+                    <div class="flex-shrink-0">
+                        <div class="w-10 h-10 rounded-full bg-blue-500 dark:bg-blue-600 flex items-center justify-center">
+                            <span class="text-white text-lg">💡</span>
+                        </div>
+                    </div>
+                    <div class="flex-1">
+                        <h3 class="text-sm font-semibold text-gray-900 dark:text-white mb-2">Quick Tips</h3>
+                        <ul class="text-sm text-gray-700 dark:text-gray-300 space-y-1">
+                            <li>• <strong>Label</strong> is a technical identifier (use lowercase and hyphens) </li>
+                            <li>• <strong>Name</strong> is what users will see in the interface - short title</li>
+                            <li>• <strong>Description</strong> helps team members understand the project's purpose</li>
+                        </ul>
+                    </div>
+                </div>
+            </CardBox>
+        </SectionMain>
+    </LayoutAuthenticated>
+</template>

resources/js/Pages/Admin/Project/Edit.vue

@@ -0,0 +1,155 @@
+<script lang="ts" setup>
+import { Head, useForm } from '@inertiajs/vue3';
+import { mdiFolderEdit, mdiArrowLeftBoldOutline, mdiFormTextarea, mdiContentSave } from '@mdi/js';
+import LayoutAuthenticated from '@/Layouts/LayoutAuthenticated.vue';
+import SectionMain from '@/Components/SectionMain.vue';
+import SectionTitleLineWithButton from '@/Components/SectionTitleLineWithButton.vue';
+import CardBox from '@/Components/CardBox.vue';
+import FormField from '@/Components/FormField.vue';
+import FormControl from '@/Components/FormControl.vue';
+import BaseButton from '@/Components/BaseButton.vue';
+import BaseButtons from '@/Components/BaseButtons.vue';
+import { stardust } from '@eidellev/adonis-stardust/client';
+
+const props = defineProps({
+    project: {
+        type: Object,
+        required: true,
+    },
+});
+
+const form = useForm({
+    label: props.project.label,
+    name: props.project.name,
+    description: props.project.description,
+});
+
+const submit = async () => {
+    await form.put(stardust.route('settings.project.update', [props.project.id]));
+};
+</script>
+
+<template>
+    <LayoutAuthenticated>
+        <Head :title="`Edit ${project.label}`" />
+        <SectionMain>
+            <SectionTitleLineWithButton :icon="mdiFolderEdit" :title="`Edit: ${project.label}`" main>
+                <BaseButton
+                    :route-name="stardust.route('settings.project.index')"
+                    :icon="mdiArrowLeftBoldOutline"
+                    label="Back"
+                    color="white"
+                    rounded-full
+                    small
+                />
+            </SectionTitleLineWithButton>
+            
+            <CardBox form @submit.prevent="submit()" class="shadow-lg">
+                <div class="grid grid-cols-1 gap-6">
+                    <FormField 
+                        label="Label" 
+                        help="Lowercase letters, numbers, and hyphens only" 
+                    >
+                        <FormControl 
+                            v-model="form.label" 
+                            type="text" 
+                            help="Lowercase letters, numbers, and hyphens only"
+                            :is-read-only=true                         
+                            class="bg-gray-100 dark:bg-slate-800 cursor-not-allowed opacity-75"
+                        />
+                    </FormField>
+
+                    <FormField 
+                        label="Name" 
+                        help="Required. Project title shown to users"
+                        :class="{ 'text-red-400': form.errors.name }"
+                    >
+                        <FormControl 
+                            v-model="form.name" 
+                            type="text" 
+                            placeholder="Enter Name" 
+                            required 
+                            :error="form.errors.name"
+                            class="font-mono transition-all focus:ring-2 focus:ring-blue-500"
+                        >
+                            <div class="text-red-400 text-sm mt-1" v-if="form.errors.name">
+                                {{ form.errors.name }}
+                            </div>
+                        </FormControl>
+                    </FormField>
+
+                    <FormField
+                        label="Description"
+                        help="Optional. Detailed description of the project"
+                        :class="{ 'text-red-400': form.errors.description }"
+                    >
+                        <FormControl
+                            v-model="form.description"
+                            :icon="mdiFormTextarea"
+                            name="description"
+                            type="textarea"
+                            placeholder="Enter project description..."
+                            :error="form.errors.description"
+                            class="transition-all focus:ring-2 focus:ring-blue-500"
+                        >
+                            <div class="text-red-400 text-sm mt-1" v-if="form.errors.description">
+                                {{ form.errors.description }}
+                            </div>
+                        </FormControl>
+                    </FormField>
+                </div>
+
+                <template #footer>
+                    <BaseButtons class="justify-between">
+                        <BaseButton
+                            :route-name="stardust.route('settings.project.index')"
+                            label="Cancel"
+                            color="white"
+                            outline
+                        />
+                        <BaseButton
+                            type="submit"
+                            color="info"
+                            :icon="mdiContentSave"
+                            label="Save Changes"
+                            :class="{ 'opacity-25': form.processing }"
+                            :disabled="form.processing"
+                            class="transition-all hover:shadow-lg"
+                        />
+                    </BaseButtons>
+                </template>
+            </CardBox>
+
+            <!-- Project Info Card -->
+            <CardBox class="mt-6 bg-gradient-to-br from-gray-50 to-gray-100 dark:from-slate-800 dark:to-slate-900">
+                <div class="flex items-start gap-4">
+                    <div class="flex-shrink-0">
+                        <div class="w-12 h-12 rounded-lg bg-blue-500 dark:bg-blue-600 flex items-center justify-center">
+                            <span class="text-white text-xl font-bold">
+                                {{ project.label.charAt(0).toUpperCase() }}
+                            </span>
+                        </div>
+                    </div>
+                    <div class="flex-1 min-w-0">
+                        <h3 class="text-lg font-semibold text-gray-900 dark:text-white mb-1">
+                            {{ project.label }}
+                        </h3>
+                        <p class="text-sm font-mono text-gray-600 dark:text-gray-400 mb-2">
+                            {{ project.name }}
+                        </p>
+                        <div class="flex items-center gap-4 text-xs text-gray-500 dark:text-gray-500">
+                            <span>
+                                <span class="font-medium">Created:</span> 
+                                {{ new Date(project.created_at).toLocaleDateString() }}
+                            </span>
+                            <span>
+                                <span class="font-medium">Updated:</span> 
+                                {{ new Date(project.updated_at).toLocaleDateString() }}
+                            </span>
+                        </div>
+                    </div>
+                </div>
+            </CardBox>
+        </SectionMain>
+    </LayoutAuthenticated>
+</template>

resources/js/Pages/Admin/Project/Index.vue

@@ -0,0 +1,182 @@
+<script setup>
+import { Head, Link, useForm, usePage } from '@inertiajs/vue3';
+import { mdiFolderMultiple, mdiPlus, mdiSquareEditOutline, mdiTrashCan, mdiAlertBoxOutline } from '@mdi/js';
+import { computed, ref } from 'vue';
+import LayoutAuthenticated from '@/Layouts/LayoutAuthenticated.vue';
+import SectionMain from '@/Components/SectionMain.vue';
+import SectionTitleLineWithButton from '@/Components/SectionTitleLineWithButton.vue';
+import BaseButton from '@/Components/BaseButton.vue';
+import CardBox from '@/Components/CardBox.vue';
+import BaseButtons from '@/Components/BaseButtons.vue';
+import NotificationBar from '@/Components/NotificationBar.vue';
+import CardBoxModal from '@/Components/CardBoxModal.vue';
+import { stardust } from '@eidellev/adonis-stardust/client';
+
+const isModalDangerActive = ref(false);
+const deleteId = ref();
+
+const props = defineProps({
+    projects: {
+        type: Array,
+        default: () => [],
+    },
+    can: {
+        type: Object,
+        default: () => ({}),
+    },
+});
+
+const flash = computed(() => usePage().props.flash);
+
+const projectCount = computed(() => props.projects.length);
+
+const formDelete = useForm({});
+
+const destroy = (id) => {
+    deleteId.value = id;
+    isModalDangerActive.value = true;
+};
+
+const onConfirm = async (id) => {
+    await formDelete.delete(stardust.route('settings.project.destroy', [id]));
+    deleteId.value = null;
+};
+
+const onCancel = () => {
+    deleteId.value = null;
+};
+
+const truncate = (text, length = 30) => {
+    if (!text) return '';
+    return text.length > length ? text.substring(0, length) + '...' : text;
+};
+
+const getProjectColor = (index) => {
+    const colors = [
+        'bg-blue-100 text-blue-800 dark:bg-blue-900 dark:text-blue-300',
+        'bg-green-100 text-green-800 dark:bg-green-900 dark:text-green-300',
+        'bg-purple-100 text-purple-800 dark:bg-purple-900 dark:text-purple-300',
+        'bg-orange-100 text-orange-800 dark:bg-orange-900 dark:text-orange-300',
+        'bg-pink-100 text-pink-800 dark:bg-pink-900 dark:text-pink-300',
+        'bg-indigo-100 text-indigo-800 dark:bg-indigo-900 dark:text-indigo-300',
+    ];
+    return colors[index % colors.length];
+};
+</script>
+
+<template>
+    <CardBoxModal
+        v-model="isModalDangerActive"
+        :delete-id="deleteId"
+        large-title="Delete Project"
+        button="danger"
+        button-label="Delete"
+        has-cancel
+        @confirm="onConfirm"
+        @cancel="onCancel"
+    >
+        <p>Are you sure you want to delete this project?</p>
+        <p>This action cannot be undone.</p>
+    </CardBoxModal>
+
+    <LayoutAuthenticated>
+        <Head title="Projects" />
+        <SectionMain>
+            <SectionTitleLineWithButton :icon="mdiFolderMultiple" title="Projects" main>
+                <div class="flex items-center gap-3">
+                    <span class="text-sm text-gray-500 dark:text-gray-400 font-medium">
+                        {{ projectCount }} {{ projectCount === 1 ? 'project' : 'projects' }}
+                    </span>
+                    <BaseButton
+                        v-if="can.create"
+                        :route-name="stardust.route('settings.project.create')"
+                        :icon="mdiPlus"
+                        label="New Project"
+                        color="info"
+                        rounded-full
+                        small
+                        class="shadow-md hover:shadow-lg transition-shadow"
+                    />
+                </div>
+            </SectionTitleLineWithButton>
+            
+            <NotificationBar v-if="flash.message" color="success" :icon="mdiAlertBoxOutline">
+                {{ flash.message }}
+            </NotificationBar>
+
+            <CardBox class="mb-6" has-table>
+                <table>
+                    <thead>
+                        <tr>
+                            <th>Label</th>
+                            <th>Name</th>
+                            <th v-if="can.edit || can.delete">Actions</th>
+                        </tr>
+                    </thead>
+
+                    <tbody>
+                        <tr v-if="projects.length === 0">
+                            <td colspan="3" class="text-center py-12">
+                                <div class="flex flex-col items-center justify-center text-gray-500 dark:text-gray-400">
+                                    <mdiFolderMultiple class="w-16 h-16 mb-4 opacity-50" />
+                                    <p class="text-lg font-medium mb-2">No projects yet</p>
+                                    <p class="text-sm mb-4">Get started by creating your first project</p>
+                                    <BaseButton
+                                        v-if="can.create"
+                                        :route-name="stardust.route('settings.project.create')"
+                                        :icon="mdiPlus"
+                                        label="Create Project"
+                                        color="info"
+                                        small
+                                    />
+                                </div>
+                            </td>
+                        </tr>
+                        <tr v-for="(project, index) in projects" :key="project.id" class="hover:bg-gray-50 dark:hover:bg-slate-800 transition-colors">
+                            <td data-label="Label">
+                                <!-- <Link
+                                    :href="stardust.route('settings.project.show', [project.id])"
+                                    class="no-underline hover:underline"
+                                > -->
+                                    <span 
+                                        class="inline-flex items-center px-3 py-1 rounded-full text-sm font-medium transition-all hover:shadow-md"
+                                        :class="getProjectColor(index)"
+                                        :title="project.label"
+                                    >
+                                        {{ truncate(project.label, 30) }}
+                                    </span>
+                                <!-- </Link> -->
+                            </td>
+                            <td data-label="Name">
+                                <span 
+                                    class="text-gray-700 dark:text-gray-300 font-mono text-sm"
+                                    :title="project.name"
+                                >
+                                    {{ truncate(project.name, 40) }}
+                                </span>
+                            </td>
+                            <td v-if="can.edit || can.delete" class="before:hidden lg:w-1 whitespace-nowrap">
+                                <BaseButtons type="justify-start lg:justify-end" no-wrap>
+                                    <BaseButton
+                                        v-if="can.edit"
+                                        :route-name="stardust.route('settings.project.edit', [project.id])"
+                                        color="info"
+                                        :icon="mdiSquareEditOutline"
+                                        small
+                                    />
+                                    <BaseButton
+                                        v-if="can.delete"
+                                        color="danger"
+                                        :icon="mdiTrashCan"
+                                        small
+                                        @click="destroy(project.id)"
+                                    />
+                                </BaseButtons>
+                            </td>
+                        </tr>
+                    </tbody>
+                </table>
+            </CardBox>
+        </SectionMain>
+    </LayoutAuthenticated>
+</template>

resources/js/Pages/Admin/Role/Index.vue

@@ -1,7 +1,7 @@
-<script setup>
+<script lang="ts" setup>
 import { Head, Link, useForm, usePage } from '@inertiajs/vue3';
 import { mdiAccountKey, mdiPlus, mdiSquareEditOutline, mdiTrashCan, mdiAlertBoxOutline } from '@mdi/js';
-import { computed, ref } from 'vue';
+import { computed, ref, ComputedRef } from 'vue';
 import LayoutAuthenticated from '@/Layouts/LayoutAuthenticated.vue';
 import SectionMain from '@/Components/SectionMain.vue';
 import SectionTitleLineWithButton from '@/Components/SectionTitleLineWithButton.vue';
@@ -9,18 +9,23 @@ import BaseButton from '@/Components/BaseButton.vue';
 import CardBox from '@/Components/CardBox.vue';
 import BaseButtons from '@/Components/BaseButtons.vue';
 import NotificationBar from '@/Components/NotificationBar.vue';
-import Pagination from '@/Components/Admin/Pagination.vue';
+import CardBoxModal from '@/Components/CardBoxModal.vue';
 import Sort from '@/Components/Admin/Sort.vue';
 import { stardust } from '@eidellev/adonis-stardust/client';
-import CardBoxModal from '@/Components/CardBoxModal.vue';
+
+interface Role {
+    id: number;
+    name: string;
+    description: string;
+}
 
 const isModalDangerActive = ref(false);
 const deleteId = ref();
 
 const props = defineProps({
     roles: {
-        type: Object,
+        type: Array<Role>,
-        default: () => ({}),
+        default: () => [],
     },
     filters: {
         type: Object,
@@ -32,88 +37,89 @@ const props = defineProps({
     },
 });
 
-const flash = computed(() => {
+const flash: ComputedRef<any> = computed(() => usePage().props.flash);
-    // let test = usePage();
-    // console.log(test);
-    return usePage().props.flash;
-});
 
-const form = useForm({
+// const form = useForm({
-    search: props.filters.search,
+//     search: props.filters.search,
-});
+// });
+
+const roleCount = computed(() => props.roles.length);
 
 const formDelete = useForm({});
-const destroy = (id, e) => {
+
-    // console.log(id);
+const destroy = (id: number) => {
     deleteId.value = id;
     isModalDangerActive.value = true;
 };
 
-const onConfirm = async (id) => {
+const onConfirm = async (id: number) => {
-    // let id = 6;
     await formDelete.delete(stardust.route('settings.role.destroy', [id]));
     deleteId.value = null;
 };
 
-const onCancel = (id) => {
+const onCancel = () => {
-    // console.log('cancel');
     deleteId.value = null;
 };
+
+const getRoleColor = (index: number) => {
+    const colors = [
+        'bg-purple-100 text-purple-800 dark:bg-purple-900 dark:text-purple-300',
+        'bg-blue-100 text-blue-800 dark:bg-blue-900 dark:text-blue-300',
+        'bg-pink-100 text-pink-800 dark:bg-pink-900 dark:text-pink-300',
+        'bg-indigo-100 text-indigo-800 dark:bg-indigo-900 dark:text-indigo-300',
+        'bg-teal-100 text-teal-800 dark:bg-teal-900 dark:text-teal-300',
+        'bg-orange-100 text-orange-800 dark:bg-orange-900 dark:text-orange-300',
+    ];
+    return colors[index % colors.length];
+};
+
+const truncate = (text: string, length = 50) => {
+    if (!text) return '-';
+    return text.length > length ? text.substring(0, length) + '...' : text;
+};
 </script>
 
 <template>
     <CardBoxModal
         v-model="isModalDangerActive"
         :delete-id="deleteId"
-        large-title="Please confirm"
+        large-title="Delete Role"
         button="danger"
         button-label="Delete"
         has-cancel
-        v-on:confirm="onConfirm"
+        @confirm="onConfirm"
-        v-on:cancel="onCancel"
+        @cancel="onCancel"
     >
-        <p>Lorem ipsum dolor sit amet <b>adipiscing elit</b></p>
+        <p>Are you sure you want to delete this role?</p>
-        <p>This is sample modal</p>
+        <p>This action cannot be undone.</p>
     </CardBoxModal>
 
     <LayoutAuthenticated>
         <Head title="Roles" />
         <SectionMain>
             <SectionTitleLineWithButton :icon="mdiAccountKey" title="Roles" main>
-                <BaseButton
+                <div class="flex items-center gap-3">
-                    v-if="can.create"
+                    <span class="text-sm text-gray-500 dark:text-gray-400 font-medium">
-                    :route-name="stardust.route('settings.role.create')"
+                        {{ roleCount }} {{ roleCount === 1 ? 'role' : 'roles' }}
-                    :icon="mdiPlus"
+                    </span>
-                    label="Add"
+                    <BaseButton
-                    color="info"
+                        v-if="can.create"
-                    rounded-full
+                        :route-name="stardust.route('settings.role.create')"
-                    small
+                        :icon="mdiPlus"
-                />
+                        label="New Role"
+                        color="info"
+                        rounded-full
+                        small
+                        class="shadow-md hover:shadow-lg transition-shadow"
+                    />
+                </div>
             </SectionTitleLineWithButton>
+
             <NotificationBar v-if="flash.message" color="success" :icon="mdiAlertBoxOutline">
                 {{ flash.message }}
             </NotificationBar>
+
             <CardBox class="mb-6" has-table>
-                <!-- <form @submit.prevent="form.get(stardust.route('role.index'))">
-					<div class="py-2 flex">
-						<div class="flex pl-4">
-							<input
-								type="search"
-								v-model="form.search"
-								class="rounded-md shadow-sm border-gray-300 focus:border-indigo-300 focus:ring focus:ring-indigo-200 focus:ring-opacity-50"
-								placeholder="Search"
-							/>
-							<BaseButton
-								label="Search"
-								type="submit"
-								color="info"
-								class="ml-4 inline-flex items-center px-4 py-2"
-							/>
-						</div>
-					</div>
-				</form> -->
-            </CardBox>
-            <CardBox class="mb-6" has-form-data>
                 <table>
                     <thead>
                         <tr>
@@ -128,17 +134,42 @@ const onCancel = (id) => {
                     </thead>
 
                     <tbody>
-                        <tr v-for="role in roles" :key="role.id">
+                        <tr v-if="roles.length === 0">
+                            <td colspan="3" class="text-center py-12">
+                                <div class="flex flex-col items-center justify-center text-gray-500 dark:text-gray-400">
+                                    <p class="text-lg font-medium mb-2">No roles yet</p>
+                                    <p class="text-sm mb-4">Get started by creating your first role</p>
+                                    <BaseButton
+                                        v-if="can.create"
+                                        :route-name="stardust.route('settings.role.create')"
+                                        :icon="mdiPlus"
+                                        label="Create Role"
+                                        color="info"
+                                        small
+                                    />
+                                </div>
+                            </td>
+                        </tr>
+                        <tr
+                            v-for="(role, index) in roles"
+                            :key="role.id"
+                            class="hover:bg-gray-50 dark:hover:bg-slate-800 transition-colors"
+                        >
                             <td data-label="Name">
-                                <Link
+                                <Link :href="stardust.route('settings.role.show', [role.id])" class="no-underline hover:underline">
-                                    :href="stardust.route('settings.role.show', [role.id])"
+                                    <span
-                                    class="no-underline hover:underline text-cyan-600 dark:text-cyan-400"
+                                        class="inline-flex items-center px-3 py-1 rounded-full text-sm font-medium transition-all hover:shadow-md"
-                                >
+                                        :class="getRoleColor(index)"
-                                    {{ role.name }}
+                                        :title="role.name"
+                                    >
+                                        {{ role.name }}
+                                    </span>
                                 </Link>
                             </td>
                             <td data-label="Description">
-                                {{ role.description }}
+                                <span class="text-gray-700 dark:text-gray-300 text-sm" :title="role.description">
+                                    {{ truncate(role.description, 50) }}
+                                </span>
                             </td>
                             <td v-if="can.edit || can.delete" class="before:hidden lg:w-1 whitespace-nowrap">
                                 <BaseButtons type="justify-start lg:justify-end" no-wrap>
@@ -149,21 +180,12 @@ const onCancel = (id) => {
                                         :icon="mdiSquareEditOutline"
                                         small
                                     />
-                                    <!-- <BaseButton
+                                    <BaseButton v-if="can.delete" color="danger" :icon="mdiTrashCan" small @click="destroy(role.id)" />
-                                        v-if="can.delete"
-                                        color="danger"
-                                        :icon="mdiTrashCan"
-                                        small
-                                        @click="($event) => destroy(role.id, $event)"
-                                    /> -->                                   
                                 </BaseButtons>
                             </td>
                         </tr>
                     </tbody>
                 </table>
-                <!-- <div class="py-4">
-					<Pagination v-bind:data="roles.meta" />
-				</div> -->
             </CardBox>
         </SectionMain>
     </LayoutAuthenticated>

resources/js/Pages/Dashboard.vue

@@ -1,6 +1,6 @@
 <script setup lang="ts">
 import { Head, usePage } from '@inertiajs/vue3';
-import { computed } from 'vue';
+import { computed, ref } from 'vue';
 import { MainService } from '@/Stores/main';
 import {
     mdiAccountMultiple,
@@ -10,6 +10,7 @@ import {
     mdiMonitorCellphone,
     mdiReload,
     mdiChartPie,
+    mdiTrendingUp,
 } from '@mdi/js';
 import LineChart from '@/Components/Charts/LineChart.vue';
 import SectionMain from '@/Components/SectionMain.vue';
@@ -18,47 +19,37 @@ import CardBox from '@/Components/CardBox.vue';
 import TableSampleClients from '@/Components/TableSampleClients.vue';
 import LayoutAuthenticated from '@/Layouts/LayoutAuthenticated.vue';
 import SectionTitleLineWithButton from '@/Components/SectionTitleLineWithButton.vue';
-// import SectionBannerStarOnGitHub from '@/Components/SectionBannerStarOnGitea.vue';
 import CardBoxDataset from '@/Components/CardBoxDataset.vue';
 import type { User } from '@/Dataset';
-const mainService = MainService()
 
-// const chartData = ref();
+const mainService = MainService();
+
+const isLoadingChart = ref(false);
+
 const fillChartData = async () => {
-    await mainService.fetchChartData();
+    isLoadingChart.value = true;
-    // chartData.value = chartConfig.sampleChartData();
+    try {
-    // chartData.value = mainService.graphData;
+        await mainService.fetchChartData();
+    } finally {
+        isLoadingChart.value = false;
+    }
 };
+
 const chartData = computed(() => mainService.graphData);
-// onMounted(async () => {
+const authors = computed(() => mainService.authors);
-//     await mainService.fetchChartData("2022");
+const datasets = computed(() => mainService.datasets);
-// });
+const datasetBarItems = computed(() => mainService.datasets.slice(0, 5));
-
+const submitters = computed(() => mainService.clients);
-// mainService.fetch('clients');
+const user = computed(() => usePage().props.authUser as User);
-// mainService.fetch('history');
-
-// mainService.fetchApi('authors');
-// mainService.fetchApi('datasets');
-
-// const clientBarItems = computed(() => mainService.clients.slice(0, 4));
-// const transactionBarItems = computed(() => mainService.history);
 
+// Initialize data
 mainService.fetchApi('clients');
 mainService.fetchApi('authors');
 mainService.fetchApi('datasets');
 mainService.fetchChartData();
 
-// const authorBarItems = computed(() => mainService.authors.slice(0, 5));
-const authors = computed(() => mainService.authors);
-const datasets = computed(() => mainService.datasets);
-const datasetBarItems = computed(() => mainService.datasets.slice(0, 5));
-const submitters = computed(() => mainService.clients);
-const user = computed(() => {
-    return usePage().props.authUser as User;
-});
-
 const userHasRoles = (roleNames: Array<string>): boolean => {
-    return user.value.roles.some(role => roleNames.includes(role.name));
+    return user.value.roles.some((role) => roleNames.includes(role.name));
 };
 </script>
 
@@ -67,18 +58,13 @@ const userHasRoles = (roleNames: Array<string>): boolean => {
         <Head title="Dashboard" />
 
         <SectionMain>
-            <SectionTitleLineWithButton v-bind:icon="mdiChartTimelineVariant" title="Overview" main>
+            <SectionTitleLineWithButton :icon="mdiChartTimelineVariant" title="Dashboard Overview" main>
-                <!-- <BaseButton
+                <div class="text-sm text-gray-500 dark:text-gray-400">
-                    href=""
+                    Welcome back, <span class="font-semibold">{{ user.login }}</span>
-                    target="_blank"
+                </div>
-                    :icon="mdiGithub"
-                    label="Star on GeoSphere Forgejo"
-                    color="contrast"
-                    rounded-full
-                    small
-                /> -->
             </SectionTitleLineWithButton>
 
+            <!-- Stats Grid -->
             <div class="grid grid-cols-1 gap-6 lg:grid-cols-3 mb-6">
                 <CardBoxWidget
                     trend="12%"
@@ -87,6 +73,7 @@ const userHasRoles = (roleNames: Array<string>): boolean => {
                     :icon="mdiAccountMultiple"
                     :number="authors.length"
                     label="Authors"
+                    class="hover:shadow-lg transition-shadow duration-300"
                 />
                 <CardBoxWidget
                     trend-type="info"
@@ -94,6 +81,7 @@ const userHasRoles = (roleNames: Array<string>): boolean => {
                     :icon="mdiDatabaseOutline"
                     :number="datasets.length"
                     label="Publications"
+                    class="hover:shadow-lg transition-shadow duration-300"
                 />
                 <CardBoxWidget
                     trend-type="up"
@@ -101,11 +89,12 @@ const userHasRoles = (roleNames: Array<string>): boolean => {
                     :icon="mdiChartTimelineVariant"
                     :number="submitters.length"
                     label="Submitters"
+                    class="hover:shadow-lg transition-shadow duration-300"
                 />
             </div>
 
-            <div class="grid grid-cols-1 lg:grid-cols-2 gap-6 mb-6">
+                 <!-- <div class="grid grid-cols-1 lg:grid-cols-2 gap-6 mb-6">
-                <!-- <div class="flex flex-col justify-between">
+               <div class="flex flex-col justify-between">
                     <CardBoxClient
                         v-for="client in authorBarItems"
                         :key="client.id"
@@ -116,7 +105,7 @@ const userHasRoles = (roleNames: Array<string>): boolean => {
                         :count="client.dataset_count"
                         
                     />
-                </div> -->
+                </div>  <!-- 
                 <div class="flex flex-col justify-between">
                     <CardBoxDataset
                         v-for="(dataset, index) in datasetBarItems"
@@ -126,20 +115,61 @@ const userHasRoles = (roleNames: Array<string>): boolean => {
                 </div>
             </div> 
 
+            <!-- Recent Datasets Section -->
+            <div v-if="datasetBarItems.length > 0" class="mb-6">
+                <SectionTitleLineWithButton :icon="mdiTrendingUp" title="Recent Publications">
+                    <span class="text-sm text-gray-500 dark:text-gray-400"> Latest {{ datasetBarItems.length }} publications </span>
+                </SectionTitleLineWithButton>
+
+                <div class="grid grid-cols-1 gap-4">
+                    <CardBoxDataset
+                        v-for="(dataset, index) in datasetBarItems"
+                        :key="index"
+                        :dataset="dataset"
+                        class="hover:shadow-md transition-all duration-300"
+                    />
+                </div>
+            </div>
+
             <!-- <SectionBannerStarOnGitHub /> -->
 
-            <SectionTitleLineWithButton :icon="mdiChartPie" title="Trends overview: Publications per month" ></SectionTitleLineWithButton>
+            <!-- Chart Section -->
-            <CardBox title="Performance" :icon="mdiFinance" :header-icon="mdiReload" class="mb-6" @header-icon-click="fillChartData">
+            <SectionTitleLineWithButton :icon="mdiChartPie" title="Trends Overview" class="mt-8">
-                <div v-if="chartData">
+                <span class="text-sm text-gray-500 dark:text-gray-400"> Publications per month </span>
+            </SectionTitleLineWithButton>
+
+            <CardBox
+                title="Performance"
+                :icon="mdiFinance"
+                :header-icon="mdiReload"
+                class="mb-6 shadow-lg"
+                @header-icon-click="fillChartData"
+            >
+                <div v-if="isLoadingChart" class="flex items-center justify-center h-96">
+                    <div class="flex flex-col items-center gap-3">
+                        <div class="animate-spin rounded-full h-12 w-12 border-b-2 border-blue-500"></div>
+                        <p class="text-sm text-gray-500 dark:text-gray-400">Loading chart data...</p>
+                    </div>
+                </div>
+                <div v-else-if="chartData" class="relative">
                     <line-chart :data="chartData" class="h-96" />
                 </div>
+                <div v-else class="flex items-center justify-center h-96 text-gray-500 dark:text-gray-400">
+                    <p>No chart data available</p>
+                </div>
             </CardBox>
 
-            <SectionTitleLineWithButton v-if="userHasRoles(['administrator'])" :icon="mdiAccountMultiple" title="Submitters" />
+            <!-- Admin Section -->
-            <!-- <NotificationBar color="info" :icon="mdiMonitorCellphone"> <b>Responsive table.</b> Collapses on mobile </NotificationBar> -->
+            <template v-if="userHasRoles(['administrator'])">
-            <CardBox v-if="userHasRoles(['administrator'])" :icon="mdiMonitorCellphone" title="Responsive table" has-table>
+                <SectionTitleLineWithButton :icon="mdiAccountMultiple" title="Submitters Management" class="mt-8">
-                <TableSampleClients />
+                    <span class="text-sm text-gray-500 dark:text-gray-400"> Administrator view </span>
-            </CardBox>
+                </SectionTitleLineWithButton>
+
+                <CardBox :icon="mdiMonitorCellphone" title="All Submitters" has-table class="shadow-lg">
+                    <TableSampleClients />
+                </CardBox>
+            </template>
+
         </SectionMain>
     </LayoutAuthenticated>
 </template>

resources/js/Pages/Editor/Dataset/Edit.vue

@@ -163,7 +163,7 @@
                                     </div>
                                 </FormControl>
                             </FormField>
-                            <FormField label="Main Title Language*" help="required: main abstract language"
+                            <FormField label="Main Description Language*" help="required: main abstract language"
                                 :class="{ 'text-red-400': form.errors['descriptions.0.language'] }"
                                 class="w-full  ml-1 flex-1">
                                 <FormControl required v-model="form.descriptions[0].language" type="text"

resources/js/Pages/Editor/Dataset/Index.vue

@@ -2,11 +2,12 @@
 // import { Head, Link, useForm, usePage } from '@inertiajs/inertia-vue3';
 import { Head, usePage } from '@inertiajs/vue3';
 import { ComputedRef } from 'vue';
-import { mdiSquareEditOutline, mdiAlertBoxOutline, mdiShareVariant, mdiBookEdit, mdiUndo, mdiLibraryShelves } from '@mdi/js';
+import { mdiSquareEditOutline, mdiAlertBoxOutline, mdiShareVariant, mdiBookEdit, mdiUndo, mdiLibraryShelves, mdiAccountArrowLeft, mdiAccountArrowRight, mdiFingerprint, mdiPublish, mdiChevronDown, mdiChevronUp, mdiTrayArrowDown, mdiCheckDecagram } from '@mdi/js';
-import { computed } from 'vue';
+import { computed, ref, onMounted } from 'vue';
 import LayoutAuthenticated from '@/Layouts/LayoutAuthenticated.vue';
 import SectionMain from '@/Components/SectionMain.vue';
 import BaseButton from '@/Components/BaseButton.vue';
+import BaseIcon from '@/Components/BaseIcon.vue';
 import CardBox from '@/Components/CardBox.vue';
 import BaseButtons from '@/Components/BaseButtons.vue';
 import NotificationBar from '@/Components/NotificationBar.vue';
@@ -26,78 +27,93 @@ const props = defineProps({
         type: Object,
         default: () => ({}),
     },
-    // user: {
-    //     type: Object,
-    //     default: () => ({}),
-    // }
 });
 
 const flash: ComputedRef<any> = computed(() => {
-    // let test = usePage();
-    // console.log(test);
     return usePage().props.flash;
 });
 
+// Legend visibility state with localStorage persistence
+const showLegend = ref(true);
+
+onMounted(() => {
+    const savedState = localStorage.getItem('datasetLegendVisible');
+    if (savedState !== null) {
+        showLegend.value = savedState === 'true';
+    }
+});
+
+const toggleLegend = () => {
+    showLegend.value = !showLegend.value;
+    localStorage.setItem('datasetLegendVisible', String(showLegend.value));
+};
 
-// const getRowClass = (dataset) => {
-//     // (props.options ? 'select' : props.type)
-//     let rowclass = '';
-//     if (dataset.server_state == 'accepted') {
-//         rowclass = 'bg-accepted';
-//     } else if (dataset.server_state == 'rejected_reviewer') {
-//         rowclass = 'bg-rejected-reviewer';
-//     } else if (dataset.server_state == 'reviewed') {
-//         rowclass = 'bg-reviewed';
-//     } else if (dataset.server_state == 'released') {
-//         rowclass = 'bg-released';
-//     } else if (dataset.server_state == 'published') {
-//         rowclass = 'bg-published';
-//     } else {
-//         rowclass = '';
-//     }
-//     return rowclass;
-// };
 const getRowClass = (dataset) => {
-    // (props.options ? 'select' : props.type)
+    // Return Tailwind classes that will be defined in tailwind.config
-    let rowclass = '';
+    const stateClasses = {
-    if (dataset.server_state == 'released') {
+        'released': 'bg-released dark:bg-released-dark',
-        rowclass = 'bg-released';
+        'editor_accepted': 'bg-editor-accepted dark:bg-editor-accepted-dark',
-    } else if (dataset.server_state == 'editor_accepted' || dataset.server_state == 'rejected_reviewer') {
+        'rejected_reviewer': 'bg-rejected-reviewer dark:bg-rejected-reviewer-dark',
-        rowclass = 'bg-editor-accepted';
+        'reviewed': 'bg-reviewed dark:bg-reviewed-dark',
-    } else if (dataset.server_state == 'reviewed') {
+        'published': 'bg-published dark:bg-published-dark',
-        rowclass = 'bg-reviewed';
+    };
-    } else if (dataset.server_state == 'published') {
-        rowclass = 'bg-published';
-    } else {
-        rowclass = '';
-    }
-    return rowclass;
-};
     
-// New method to format server state
+    return stateClasses[dataset.server_state] || '';
-const formatServerState = (state: string) => {
-    if (state === 'inprogress') {
-        return 'draft';
-    } else if (state === 'released') {
-        return 'submitted';
-    } else if (state === 'approved') {
-        return 'ready for review';
-    } else if (state === 'reviewer_accepted') {
-        return 'in review';
-    }
-    return state; // Return the original state for other cases
 };
 
 
+// Method to get state badge color
+const getStateColor = (state: string) => {
+    const stateColors = {
+        'inprogress': 'bg-sky-200 text-sky-900 dark:bg-sky-900 dark:text-sky-200',
+        'released': 'bg-blue-300 text-blue-900 dark:bg-blue-900 dark:text-blue-200',
+        'editor_accepted': 'bg-teal-200 text-teal-900 dark:bg-teal-900 dark:text-teal-200',
+        'rejected_reviewer': 'bg-amber-200 text-amber-900 dark:bg-amber-900 dark:text-amber-200',
+        'rejected_to_reviewer': 'bg-yellow-200 text-yellow-900 dark:bg-yellow-900 dark:text-yellow-200', 
+         'rejected_editor': 'bg-rose-300 text-rose-900 dark:bg-rose-900 dark:text-rose-200',
+        'reviewed': 'bg-yellow-300 text-yellow-900 dark:bg-yellow-900 dark:text-yellow-200',
+        'published': 'bg-green-300 text-green-900 dark:bg-green-900 dark:text-green-200',
+        'approved': 'bg-cyan-200 text-cyan-900 dark:bg-cyan-900 dark:text-cyan-200',
+        'reviewer_accepted': 'bg-lime-200 text-lime-900 dark:bg-lime-900 dark:text-lime-200',
+    };
+    return stateColors[state] || 'bg-sky-200 text-sky-900 dark:bg-sky-900 dark:text-sky-200';
+};
+
+// Dynamic legend definitions
+const datasetStates = [
+    { key: 'released', label: 'Submitted' },
+    { key: 'editor_accepted', label: 'In Approval' },
+    // { key: 'approved', label: 'Ready for Review' },
+    // { key: 'reviewer_accepted', label: 'In Review' },
+    { key: 'reviewed', label: 'Reviewed' },
+    { key: 'published', label: 'Published' },
+    { key: 'rejected_reviewer', label: 'Rejected by Reviewer' },
+];
+const getLabel = (key: string) => {
+  return datasetStates.find(s => s.key === key)?.label || 'Unknown'
+}
+
+const availableActions = [
+    { icon: mdiSquareEditOutline, label: 'Edit', color: 'text-blue-500' },
+    { icon: mdiTrayArrowDown, label: 'Receive', color: 'text-cyan-500' },
+    { icon: mdiCheckDecagram, label: 'Approve (Send to Reviewer)', color: 'text-teal-600' },
+    { icon: mdiAccountArrowLeft, label: 'Reject to Submitter', color: 'text-amber-600' },
+    { icon: mdiAccountArrowRight, label: 'Reject to Reviewer', color: 'text-yellow-600' },
+    { icon: mdiLibraryShelves, label: 'Classify', color: 'text-blue-500' },
+    { icon: mdiPublish, label: 'Publish', color: 'text-green-600' },
+    { icon: mdiFingerprint, label: 'Mint DOI', color: 'text-cyan-600' },
+];
+
+const truncateTitle = (text: string, length = 50) => {
+    if (!text) return '';
+    return text.length > length ? text.substring(0, length) + '...' : text;
+};
 </script>
 
 <template>
     <LayoutAuthenticated>
-
         <Head title="Editor Datasets" />
         <SectionMain>
-
-
             <NotificationBar v-if="flash.message" color="success" :icon="mdiAlertBoxOutline">
                 {{ flash.message }}
             </NotificationBar>
@@ -108,6 +124,80 @@ const formatServerState = (state: string) => {
                 {{ flash.error }}
             </NotificationBar>
 
+            <!-- Legend -->
+            <CardBox class="mb-4">
+                <!-- Legend Header with Toggle -->
+                <div 
+                    class="flex items-center justify-between cursor-pointer select-none p-4 border-b border-gray-200 dark:border-slate-700 hover:bg-gray-50 dark:hover:bg-slate-800/50 transition-colors"
+                    @click="toggleLegend"
+                >
+                    <div class="flex items-center gap-2">
+                        <svg class="w-5 h-5 text-gray-600 dark:text-gray-400" fill="none" stroke="currentColor" viewBox="0 0 24 24">
+                            <path stroke-linecap="round" stroke-linejoin="round" stroke-width="2" d="M13 16h-1v-4h-1m1-4h.01M21 12a9 9 0 11-18 0 9 9 0 0118 0z" />
+                        </svg>
+                        <h3 class="text-sm font-semibold text-gray-700 dark:text-gray-300">
+                            Legend - States & Actions
+                        </h3>
+                    </div>
+                    <div class="flex items-center gap-2">
+                        <span class="text-xs text-gray-500 dark:text-gray-400">
+                            {{ showLegend ? 'Click to hide' : 'Click to show' }}
+                        </span>
+                        <BaseIcon 
+                            :path="showLegend ? mdiChevronUp : mdiChevronDown" 
+                            :size="20" 
+                            class="text-gray-500 dark:text-gray-400 transition-transform"
+                        />
+                    </div>
+                </div>
+
+                <!-- Collapsible Legend Content -->
+                <transition
+                    enter-active-class="transition-all duration-300 ease-out"
+                    enter-from-class="max-h-0 opacity-0"
+                    enter-to-class="max-h-96 opacity-100"
+                    leave-active-class="transition-all duration-300 ease-in"
+                    leave-from-class="max-h-96 opacity-100"
+                    leave-to-class="max-h-0 opacity-0"
+                >
+                    <div v-show="showLegend" class="overflow-hidden">
+                        <div class="grid grid-cols-1 md:grid-cols-2 gap-6 p-4">
+                            <!-- State Colors Legend -->
+                            <div>
+                                <h3 class="text-sm font-semibold text-gray-700 dark:text-gray-300 mb-3 flex items-center gap-2">
+                                    <svg class="w-4 h-4" fill="none" stroke="currentColor" viewBox="0 0 24 24">
+                                        <path stroke-linecap="round" stroke-linejoin="round" stroke-width="2" d="M7 7h.01M7 3h5c.512 0 1.024.195 1.414.586l7 7a2 2 0 010 2.828l-7 7a2 2 0 01-2.828 0l-7-7A1.994 1.994 0 013 12V7a4 4 0 014-4z" />
+                                    </svg>
+                                    Dataset States
+                                </h3>
+                                <div class="grid grid-cols-2 gap-2 text-xs">
+                                    <div v-for="state in datasetStates" :key="state.key" class="flex items-center gap-2">
+                                        <span class="inline-flex items-center px-2 py-0.5 rounded-full" :class="getStateColor(state.key)">
+                                            {{ state.label }}
+                                        </span>
+                                    </div>
+                                </div>
+                            </div>
+
+                            <!-- Actions Legend -->
+                            <div>
+                                <h3 class="text-sm font-semibold text-gray-700 dark:text-gray-300 mb-3 flex items-center gap-2">
+                                    <svg class="w-4 h-4" fill="none" stroke="currentColor" viewBox="0 0 24 24">
+                                        <path stroke-linecap="round" stroke-linejoin="round" stroke-width="2" d="M13 10V3L4 14h7v7l9-11h-7z" />
+                                    </svg>
+                                    Available Actions
+                                </h3>
+                                <div class="grid grid-cols-1 gap-1.5 text-xs">
+                                    <div v-for="action in availableActions" :key="action.label" class="flex items-center gap-2">
+                                        <BaseIcon :path="action.icon" :size="16" :class="action.color" />
+                                        <span class="text-gray-700 dark:text-gray-300">{{ action.label }}</span>
+                                    </div>
+                                </div>
+                            </div>
+                        </div>
+                    </div>
+                </transition>
+            </CardBox>
 
             <!-- table -->
             <CardBox class="mb-6" has-table>
@@ -115,172 +205,144 @@ const formatServerState = (state: string) => {
                     <table>
                         <thead>
                             <tr>
-                                <th scope="col" class="py-3 text-left text-xs font-medium uppercase tracking-wider dark:text-white">
+                                <th>Title</th>
-                                    <!-- <Sort label="Dataset Title" attribute="title" :search="form.search" /> -->
+                                <th>Submitter</th>
-                                    Title
+                                <th>State</th>
-                                </th>
+                                <th>Editor</th>
-                                <th scope="col" class="py-3 text-left text-xs font-medium uppercase tracking-wider dark:text-white">
+                                <th>Modified</th>
-                                    Submitter
+                                <th v-if="can.edit || can.delete">Actions</th>
-                                </th>
-                                <th scope="col" class="py-3 text-left text-xs font-medium uppercase tracking-wider dark:text-white">
-                                    State
-                                </th>
-                                <th scope="col" class="py-3 text-left text-xs font-medium uppercase tracking-wider dark:text-white">
-                                    Editor
-                                </th>
-                                <th scope="col" class="py-3 text-left text-xs font-medium uppercase tracking-wider dark:text-white">
-                                    Date of last modification
-                                </th>
-                                <th scope="col" class="relative px-6 py-3 dark:text-white" v-if="can.edit || can.delete">
-                                    <span class="sr-only">Actions</span>
-                                </th>
                             </tr>
                         </thead>
 
-                        <tbody class="bg-white divide-y divide-gray-200">
+                        <tbody>
                             <tr v-for="dataset in props.datasets.data" :key="dataset.id"
-                                :class="[getRowClass(dataset)]">
+                                :class="['hover:bg-gray-50 dark:hover:bg-slate-800 transition-colors', getRowClass(dataset)]">
-                                <td data-label="Login"
+                                <td data-label="Title">
-                                    class="py-4 whitespace-nowrap text-gray-700 table-title">
+                                    <div class="max-w-xs">
-                                    <!-- <Link v-bind:href="stardust.route('settings.user.show', [user.id])"
+                                        <span 
-                                    class="no-underline hover:underline text-cyan-600 dark:text-cyan-400">
+                                            class="text-gray-700 dark:text-gray-300 text-sm font-medium"
-                                {{ user.login }}
+                                            :title="dataset.main_title"
-                                </Link> -->
+                                        >
-                                    <!-- {{ user.id }} -->
+                                            {{ truncateTitle(dataset.main_title) }}
-                                    {{ dataset.main_title }}
+                                        </span>
+                                    </div>
                                 </td>
-                                <td class="py-4 whitespace-nowrap text-gray-700">
+                                <td data-label="Submitter">
-                                    <div class="text-sm">{{ dataset.user.login }}</div>
+                                    <span class="text-sm text-gray-700 dark:text-gray-300">
+                                        {{ dataset.user.login }}
+                                    </span>
                                 </td>
-                                <td class="py-4 whitespace-nowrap text-gray-700">
+                                <td data-label="State">
-                                    <div class="text-sm"> {{ formatServerState(dataset.server_state) }}</div>
+                                    <div class="flex items-center gap-2">
-                                    <div v-if="dataset.server_state === 'rejected_reviewer' && dataset.reject_reviewer_note"
+                                        <span class="inline-flex items-center px-2.5 py-0.5 rounded-full text-xs font-medium capitalize"
-                                        class="inline-block relative ml-2 group">
+                                            :class="getStateColor(dataset.server_state)">
-                                        <button
+                                            {{ getLabel(dataset.server_state) }}
-                                            class="w-5 h-5 rounded-full bg-gray-200 text-gray-600 text-xs flex items-center justify-center focus:outline-none hover:bg-gray-300">
+                                        </span>
-                                            i
+                                        <div v-if="dataset.server_state === 'rejected_reviewer' && dataset.reject_reviewer_note"
-                                        </button>
+                                            class="relative group">
-                                        <div
+                                            <button
-                                            class="absolute left-0 top-full mt-1 w-64 bg-white shadow-lg rounded-md p-3 text-xs text-left z-50 transform scale-0 origin-top-left transition-transform duration-100 group-hover:scale-100">
+                                                class="w-5 h-5 rounded-full bg-gray-200 dark:bg-slate-700 text-gray-600 dark:text-gray-300 text-xs flex items-center justify-center focus:outline-none hover:bg-gray-300 dark:hover:bg-slate-600 transition-colors">
-                                            <p class="text-gray-700 max-h-40 overflow-y-auto overflow-x-hidden whitespace-normal break-words">
+                                                i
-                                                {{ dataset.reject_reviewer_note }}
+                                            </button>
-                                            </p>
+                                            <div
-                                            <div class="absolute -top-1 left-1 w-2 h-2 bg-white transform rotate-45">
+                                                class="absolute left-0 top-full mt-1 w-64 bg-white dark:bg-slate-800 shadow-lg rounded-md p-3 text-xs text-left z-50 transform scale-0 origin-top-left transition-transform duration-100 group-hover:scale-100 border border-gray-200 dark:border-slate-700">
+                                                <p class="text-gray-700 dark:text-gray-300 max-h-40 overflow-y-auto overflow-x-hidden whitespace-normal break-words">
+                                                    {{ dataset.reject_reviewer_note }}
+                                                </p>
+                                                <div class="absolute -top-1 left-1 w-2 h-2 bg-white dark:bg-slate-800 border-l border-t border-gray-200 dark:border-slate-700 transform rotate-45">
+                                                </div>
                                             </div>
                                         </div>
                                     </div>
                                 </td>
 
-                                <td class="py-4 whitespace-nowrap text-gray-700"
+                                <td data-label="Editor" v-if="dataset.server_state === 'released'">
-                                    v-if="dataset.server_state === 'released'">
+                                    <span class="text-sm text-gray-600 dark:text-gray-400 italic" :title="dataset.server_date_modified">
-                                    <div class="text-sm" :title="dataset.server_date_modified">
+                                        Preferred: {{ dataset.preferred_reviewer }}
-                                        Preferred reviewer: {{ dataset.preferred_reviewer }}
+                                    </span>
-                                    </div>
                                 </td>
-                                <td class="py-4 whitespace-nowrap text-gray-700"
+                                <td data-label="Editor"
                                     v-else-if="dataset.server_state === 'editor_accepted' || dataset.server_state === 'rejected_reviewer'">
-                                    <div class="text-sm" :title="dataset.server_date_modified">
+                                    <span class="text-sm text-gray-600 dark:text-gray-400 italic" :title="dataset.server_date_modified">
-                                        In approval by: {{ dataset.editor?.login }}
+                                        In approval: {{ dataset.editor?.login }}
-                                    </div>
+                                    </span>
                                 </td>
-                                <td class="py-4 whitespace-nowrap text-gray-700" v-else>
+                                <td data-label="Editor" v-else>
-                                    <div class="text-sm">{{ dataset.editor?.login }}</div>
+                                    <span class="text-sm text-gray-700 dark:text-gray-300">
+                                        {{ dataset.editor?.login || '—' }}
+                                    </span>
                                 </td>
 
-                                <td data-label="modified" class="py-4 whitespace-nowrap text-gray-700">
+                                <td data-label="Modified">
-                                    <div class="text-sm" :title="dataset.server_date_modified">
+                                    <span class="text-sm text-gray-600 dark:text-gray-400" :title="dataset.server_date_modified">
                                         {{ dataset.server_date_modified }}
-                                    </div>
+                                    </span>
                                 </td>
-                                <td
+                                <td v-if="can.edit || can.delete" class="before:hidden lg:w-1 whitespace-nowrap">
-                                    class="py-4 whitespace-nowrap text-right text-sm font-medium text-gray-700 dark:text-white">
+                                    <BaseButtons type="justify-start lg:justify-end" no-wrap>
-                                    <div type="justify-start lg:justify-end" class="grid grid-cols-2 gap-x-2 gap-y-2"
-                                        no-wrap>
-
                                         <BaseButton v-if="can.receive && (dataset.server_state == 'released')"
                                             :route-name="stardust.route('editor.dataset.receive', [dataset.id])"
-                                            color="info" :icon="mdiSquareEditOutline" :label="'Receive edit task'" small
+                                            color="info" :icon="mdiTrayArrowDown" small 
-                                            class="col-span-1" />
+                                            title="Receive edit task" />
 
                                         <BaseButton
                                             v-if="can.approve && (dataset.server_state == 'editor_accepted' || dataset.server_state == 'rejected_reviewer')"
                                             :route-name="stardust.route('editor.dataset.approve', [dataset.id])"
-                                            color="info" :icon="mdiShareVariant" :label="'Approve'" small
+                                            color="success" :icon="mdiCheckDecagram" small 
-                                            class="col-span-1" />
+                                            title="Approve (Send to Reviewer)" />
 
                                         <BaseButton
                                             v-if="can.approve && (dataset.server_state == 'editor_accepted' || dataset.server_state == 'rejected_reviewer')"
                                             :route-name="stardust.route('editor.dataset.reject', [dataset.id])"
-                                            color="info" :icon="mdiUndo" label="Reject" small class="col-span-1">
+                                            color="danger" :icon="mdiAccountArrowLeft" small
-                                        </BaseButton>
+                                            title="Reject to Submitter" />
 
                                         <BaseButton
                                             v-if="can.edit && (dataset.server_state == 'editor_accepted' || dataset.server_state == 'rejected_reviewer')"
                                             :route-name="stardust.route('editor.dataset.edit', [Number(dataset.id)])"
-                                            color="info" :icon="mdiSquareEditOutline" :label="'Edit'" small
+                                            color="info" :icon="mdiSquareEditOutline" small
-                                            class="col-span-1">
+                                            title="Edit" />
-                                        </BaseButton>
 
                                         <BaseButton
                                             v-if="can.edit && (dataset.server_state == 'editor_accepted' || dataset.server_state == 'rejected_reviewer')"
                                             :route-name="stardust.route('editor.dataset.categorize', [dataset.id])"
-                                            color="info" :icon="mdiLibraryShelves" :label="'Classify'" small
+                                            color="info" :icon="mdiLibraryShelves" small
-                                            class="col-span-1">
+                                            title="Classify" />
-                                        </BaseButton>
                                        
                                         <BaseButton v-if="can.publish && (dataset.server_state == 'reviewed')"
                                             :route-name="stardust.route('editor.dataset.rejectToReviewer', [dataset.id])"
-                                            color="info" :icon="mdiUndo" :label="'Reject To Reviewer'" small
+                                            color="warning" :icon="mdiAccountArrowRight" small
-                                            class="col-span-1" />
+                                            title="Reject to Reviewer" />
+                                            
                                         <BaseButton v-if="can.publish && (dataset.server_state == 'reviewed')"
                                             :route-name="stardust.route('editor.dataset.publish', [dataset.id])"
-                                            color="info" :icon="mdiBookEdit" :label="'Publish'" small
+                                            color="success" :icon="mdiPublish" small
-                                            class="col-span-1" />
+                                            title="Publish" />
 
                                         <BaseButton
                                             v-if="can.publish && (dataset.server_state == 'published' && !dataset.identifier)"
                                             :route-name="stardust.route('editor.dataset.doi', [dataset.id])"
-                                            color="info" :icon="mdiBookEdit" :label="'Mint DOI'" small
+                                            color="info" :icon="mdiFingerprint" small
-                                            class="col-span-1 last-in-row" />
+                                            title="Mint DOI" />
-
+                                    </BaseButtons>
-                                    </div>
                                 </td>
                             </tr>
                         </tbody>
                     </table>
                 </div>
                 <div v-else>
-                    <!-- Show warning message if datasets are not defined or empty -->
+                    <div class="text-center py-12">
-                    <div class="bg-yellow-200 text-yellow-800 rounded-md p-4">
+                        <div class="flex flex-col items-center justify-center text-gray-500 dark:text-gray-400">
-                        <p>No datasets defined.</p>
+                            <p class="text-lg font-medium mb-2">No datasets found</p>
-                        <!-- You can add more descriptive text here -->
+                            <p class="text-sm">Datasets will appear here when they are submitted</p>
+                        </div>
                     </div>
                 </div>
 
-
-                <!-- <BaseButton
-                                        v-if="can.edit && (dataset.server_state == 'editor_accepted' || dataset.server_state == 'rejected_reviewer')"
-                                        :route-name="stardust.route('editor.dataset.edit', [dataset.id])" color="info"
-                                        :icon="mdiSquareEditOutline" :label="'Edit'" small />  -->
                 <div class="py-4">
                     <Pagination v-bind:data="datasets.meta" />
-
                 </div>
             </CardBox>
         </SectionMain>
     </LayoutAuthenticated>
 </template>
-
-
-<style scoped lang="css">
-.table-title {
-    max-width: 200px;
-    /* set a maximum width */
-    overflow: hidden;
-    /* hide overflow */
-    text-overflow: ellipsis;
-    /* show ellipsis for overflowed text */
-    white-space: nowrap;
-    /* prevent wrapping */
-}
-</style>

resources/js/Pages/Map.vue

@@ -1,40 +1,15 @@
 <script setup lang="ts">
 import { Head } from '@inertiajs/vue3';
 import { ref, Ref } from 'vue';
-import { mdiChartTimelineVariant, mdiGithub } from '@mdi/js';
+import { mdiChartTimelineVariant, mdiGithub, mdiMapMarker, mdiCalendar, mdiLockOpenVariant } from '@mdi/js';
 import LayoutAuthenticated from '@/Layouts/LayoutAuthenticated.vue';
 import SectionMain from '@/Components/SectionMain.vue';
 import BaseButton from '@/Components/BaseButton.vue';
 import SectionTitleLineWithButton from '@/Components/SectionTitleLineWithButton.vue';
 import { MapOptions } from '@/Components/Map/MapOptions';
-// import { stardust } from '@eidellev/adonis-stardust/client';
 import SearchMap from '@/Components/Map/SearchMap.vue';
 import { OpensearchDocument } from '@/Dataset';
 
-// const fitBounds: LatLngBoundsExpression = [
-// 	[46.4318173285, 9.47996951665],
-// 	[49.0390742051, 16.9796667823],
-// ];
-
-// const mapId = 'map';
-
-// const coverage = {
-// 	x_min: undefined,
-// 	y_min: undefined,
-// 	x_max: undefined,
-// 	y_max: undefined,
-// 	elevation_min: undefined,
-// 	elevation_max: undefined,
-// 	elevation_absolut: undefined,
-// 	depth_min: undefined,
-// 	depth_max: undefined,
-// 	depth_absolut: undefined,
-// 	time_min: undefined,
-// 	time_max: undefined,
-// 	time_absolut: undefined,
-// };
-
-// Replace with your actual data
 const datasets: Ref<OpensearchDocument[]> = ref([]);
 const openAccessLicences: Array<string> = ['CC-BY-4.0', 'CC-BY-SA-4.0'];
 
@@ -48,58 +23,499 @@ const mapOptions: MapOptions = {
 
 <template>
     <LayoutAuthenticated :showAsideMenu="false">
-
         <Head title="Map" />
 
-        <!-- <section class="p-6" v-bind:class="containerMaxW"> -->
         <SectionMain>
             <SectionTitleLineWithButton v-bind:icon="mdiChartTimelineVariant" title="Tethys Map" main>
-                <BaseButton href="https://gitea.geosphere.at/geolba/tethys" target="_blank" :icon="mdiGithub"
+                <BaseButton
-                    label="Star on GeoSPhere Forgejo" color="contrast" rounded-full small />
+                    href="https://gitea.geosphere.at/geolba/tethys"
-                <!-- <BaseButton :route-name="stardust.route('app.login.show')" label="Login" color="white" rounded-full small /> -->
+                    target="_blank"
+                    :icon="mdiGithub"
+                    label="Star on GeoSphere Forgejo"
+                    color="contrast"
+                    rounded-full
+                    small
+                />
             </SectionTitleLineWithButton>
 
-            <!-- <SectionBannerStarOnGitea /> -->
+            <!-- Map Component with enhanced styling -->
+            <div class="map-wrapper">
+                <SearchMap :datasets="datasets" :map-options="mapOptions"></SearchMap>
+            </div>
 
-            <!-- <CardBox> -->
+            <!-- Results Header -->
-            <!-- <div id="map" class="map-container mapDesktop mt-6 mb-6 rounded-2xl py-12 px-6 text-center">
+            <div v-if="datasets.length > 0" class="results-header">
-				<DrawControlComponent ref="draw" :preserve="false" :mapId="mapId" :southWest="southWest"
+                <h2 class="results-title">
-					:northEast="northEast">
+                    <span class="results-count">{{ datasets.length }}</span>
-				</DrawControlComponent>
+                    {{ datasets.length === 1 ? 'Dataset' : 'Datasets' }} Found
-			</div> -->
+                </h2>
-            <SearchMap :datasets="datasets" :map-options="mapOptions"></SearchMap>
+                <p class="results-subtitle">Click on any card to view details</p>
+            </div>
 
-            <div d="search-result-list-wrapper" class="flex flex-wrap col-span-24 h-full">
+            <!-- Enhanced Results Grid -->
-                <div v-for="dataset in datasets" :key="dataset.id" class="w-full sm:w-1/2 md:w-1/3 lg:w-1/4 p-4">
+            <div class="results-grid">
-                    <div class="bg-white rounded shadow p-6">
+                <div
-                        <h3 class="text-lg leading-tight text-gray-500 dark:text-slate-400">
+                    v-for="(dataset, index) in datasets"
+                    :key="dataset.id"
+                    class="dataset-card"
+                    :style="{ animationDelay: `${index * 50}ms` }"
+                >
+                    <!-- Card Header with Icon -->
+                    <div class="card-header">
+                        <div class="card-icon">
+                            <svg class="icon" viewBox="0 0 24 24">
+                                <path :d="mdiMapMarker" />
+                            </svg>
+                        </div>
+                        <span class="card-type">{{ dataset.doctype }}</span>
+                    </div>
+
+                    <!-- Card Content -->
+                    <div class="card-content">
+                        <h3 class="card-title">
                             {{ dataset.title_output }}
                         </h3>
-                        <!-- <h2 class="text-xl font-bold mb-2">{{ dataset.title_output }}</h2> -->
+                        <p class="card-abstract">
-                        <p class="text-gray-700 mb-2">{{ dataset.abstract_output }}</p>
+                            {{ dataset.abstract_output }}
-                        <div class="text-sm text-gray-600">
-                            <div v-for="author in dataset.author" :key="author" class="mb-1">{{ author }}</div>
-                        </div>
-                        <div class="mt-4">
-                            <span
-                                class="inline-block bg-gray-200 rounded-full px-3 py-1 text-sm font-semibold text-gray-700 mr-2 mb-2">
-                                {{ dataset.year }}
-                            </span>
-                            <span
-                                class="inline-block bg-gray-200 rounded-full px-3 py-1 text-sm font-semibold text-gray-700 mr-2 mb-2">
-                                {{ dataset.language }}
-                            </span>
-                        </div>
-                        <p>
-                            <span class="label"><i class="fas fa-file"></i> {{ dataset.doctype }}</span>
-                            <!-- <span>Licence: {{ document.licence }}</span> -->
-                            <span v-if="openAccessLicences.includes(dataset.licence)" class="label titlecase"><i
-                                    class="fas fa-lock-open"></i> Open Access</span>
                         </p>
                     </div>
+
+                    <!-- Authors Section -->
+                    <div v-if="dataset.author && dataset.author.length > 0" class="card-authors">
+                        <div class="author-label">Authors:</div>
+                        <div class="author-list">
+                            <span v-for="(author, idx) in dataset.author.slice(0, 3)" :key="idx" class="author-tag">
+                                {{ author }}
+                            </span>
+                            <span v-if="dataset.author.length > 3" class="author-more"> +{{ dataset.author.length - 3 }} more </span>
+                        </div>
+                    </div>
+
+                    <!-- Card Footer with Metadata -->
+                    <div class="card-footer">
+                        <div class="metadata-tags">
+                            <span class="tag tag-year">
+                                <svg class="tag-icon" viewBox="0 0 24 24">
+                                    <path :d="mdiCalendar" />
+                                </svg>
+                                {{ dataset.year }}
+                            </span>
+                            <span class="tag tag-language">
+                                {{ dataset.language?.toUpperCase() }}
+                            </span>
+                            <span v-if="openAccessLicences.includes(dataset.licence)" class="tag tag-open-access">
+                                <svg class="tag-icon" viewBox="0 0 24 24">
+                                    <path :d="mdiLockOpenVariant" />
+                                </svg>
+                                Open Access
+                            </span>
+                        </div>
+                    </div>
+
+                    <!-- Hover Effect Overlay -->
+                    <div class="card-overlay"></div>
                 </div>
             </div>
+
+            <!-- Empty State -->
+            <div v-if="datasets.length === 0" class="empty-state">
+                <div class="empty-icon">
+                    <svg viewBox="0 0 24 24" fill="none" stroke="currentColor" stroke-width="2">
+                        <path d="M21 10c0 7-9 13-9 13s-9-6-9-13a9 9 0 0 1 18 0z" />
+                        <circle cx="12" cy="10" r="3" />
+                    </svg>
+                </div>
+                <h3 class="empty-title">No datasets selected</h3>
+                <p class="empty-description">Draw a rectangle on the map to search for datasets in that area</p>
+            </div>
         </SectionMain>
-        <!-- </section> -->
     </LayoutAuthenticated>
 </template>
+
+<style scoped>
+/* Map Wrapper */
+.map-wrapper {
+    margin-top: 1.5rem;
+    margin-bottom: 2rem;
+    position: relative;
+    border-radius: 1rem;
+    overflow: hidden;
+    box-shadow:
+        0 4px 6px -1px rgba(0, 0, 0, 0.1),
+        0 2px 4px -1px rgba(0, 0, 0, 0.06);
+    transition: box-shadow 0.3s ease;
+}
+
+.map-wrapper:hover {
+    box-shadow:
+        0 10px 15px -3px rgba(0, 0, 0, 0.1),
+        0 4px 6px -2px rgba(0, 0, 0, 0.05);
+}
+
+/* Results Header */
+.results-header {
+    margin-bottom: 1.5rem;
+    padding-bottom: 1rem;
+    border-bottom: 2px solid #e5e7eb;
+}
+
+.dark .results-header {
+    border-bottom-color: #374151;
+}
+
+.results-title {
+    font-size: 1.5rem;
+    font-weight: 700;
+    color: #1f2937;
+    margin-bottom: 0.25rem;
+}
+
+.dark .results-title {
+    color: #f9fafb;
+}
+
+.results-count {
+    display: inline-block;
+    padding: 0.25rem 0.75rem;
+    background: linear-gradient(135deg, #65dc21 0%, #357c06 100%);
+    color: white;
+    border-radius: 0.5rem;
+    font-size: 1.25rem;
+    margin-right: 0.5rem;
+}
+
+.results-subtitle {
+    color: #6b7280;
+    font-size: 0.875rem;
+}
+
+.dark .results-subtitle {
+    color: #9ca3af;
+}
+
+/* Results Grid */
+.results-grid {
+    display: grid;
+    grid-template-columns: repeat(auto-fill, minmax(300px, 1fr));
+    gap: 1.5rem;
+    margin-top: 2rem;
+}
+
+/* Dataset Card */
+.dataset-card {
+    background: white;
+    border-radius: 1rem;
+    overflow: hidden;
+    box-shadow:
+        0 1px 3px 0 rgba(0, 0, 0, 0.1),
+        0 1px 2px 0 rgba(0, 0, 0, 0.06);
+    transition: all 0.3s cubic-bezier(0.4, 0, 0.2, 1);
+    position: relative;
+    cursor: pointer;
+    animation: fadeInUp 0.5s ease-out forwards;
+    opacity: 0;
+}
+
+@keyframes fadeInUp {
+    from {
+        opacity: 0;
+        transform: translateY(20px);
+    }
+    to {
+        opacity: 1;
+        transform: translateY(0);
+    }
+}
+
+.dark .dataset-card {
+    background: #1f2937;
+    box-shadow: 0 1px 3px 0 rgba(0, 0, 0, 0.3);
+}
+
+.dataset-card:hover {
+    transform: translateY(-4px);
+    box-shadow:
+        0 20px 25px -5px rgba(0, 0, 0, 0.1),
+        0 10px 10px -5px rgba(0, 0, 0, 0.04);
+}
+
+.dark .dataset-card:hover {
+    box-shadow: 0 20px 25px -5px rgba(0, 0, 0, 0.5);
+}
+
+/* Card Header */
+.card-header {
+    display: flex;
+    align-items: center;
+    justify-content: space-between;
+    padding: 1rem 1.5rem;
+    background: linear-gradient(135deg, #65dc21 0%, #357c06 100%);
+    color: white;
+}
+
+.card-icon {
+    width: 2rem;
+    height: 2rem;
+    display: flex;
+    align-items: center;
+    justify-content: center;
+    background: rgba(255, 255, 255, 0.2);
+    border-radius: 0.5rem;
+}
+
+.icon {
+    width: 1.25rem;
+    height: 1.25rem;
+    fill: currentColor;
+}
+
+.card-type {
+    font-size: 0.75rem;
+    font-weight: 600;
+    text-transform: uppercase;
+    letter-spacing: 0.05em;
+    background: rgba(255, 255, 255, 0.2);
+    padding: 0.25rem 0.75rem;
+    border-radius: 9999px;
+}
+
+/* Card Content */
+.card-content {
+    padding: 1.5rem;
+}
+
+.card-title {
+    font-size: 1.125rem;
+    font-weight: 600;
+    color: #1f2937;
+    margin-bottom: 0.75rem;
+    line-height: 1.4;
+    display: -webkit-box;
+    -webkit-line-clamp: 2;
+    line-clamp: 2;
+    -webkit-box-orient: vertical;
+    overflow: hidden;
+}
+
+.dark .card-title {
+    color: #f9fafb;
+}
+
+.card-abstract {
+    color: #6b7280;
+    font-size: 0.875rem;
+    line-height: 1.6;
+    display: -webkit-box;
+    -webkit-line-clamp: 3;
+    line-clamp: 3;
+    -webkit-box-orient: vertical;
+    overflow: hidden;
+}
+
+.dark .card-abstract {
+    color: #9ca3af;
+}
+
+/* Authors Section */
+.card-authors {
+    padding: 0 1.5rem 1rem;
+    border-top: 1px solid #f3f4f6;
+}
+
+.dark .card-authors {
+    border-top-color: #374151;
+}
+
+.author-label {
+    font-size: 0.75rem;
+    font-weight: 600;
+    color: #6b7280;
+    text-transform: uppercase;
+    letter-spacing: 0.05em;
+    margin-bottom: 0.5rem;
+}
+
+.dark .author-label {
+    color: #9ca3af;
+}
+
+.author-list {
+    display: flex;
+    flex-wrap: wrap;
+    gap: 0.5rem;
+}
+
+.author-tag {
+    font-size: 0.75rem;
+    color: #4b5563;
+    background: #f3f4f6;
+    padding: 0.25rem 0.625rem;
+    border-radius: 0.375rem;
+    white-space: nowrap;
+}
+
+.dark .author-tag {
+    color: #d1d5db;
+    background: #374151;
+}
+
+.author-more {
+    font-size: 0.75rem;
+    color: #6b7280;
+    font-style: italic;
+}
+
+.dark .author-more {
+    color: #9ca3af;
+}
+
+/* Card Footer */
+.card-footer {
+    padding: 1rem 1.5rem;
+    background: #f9fafb;
+    border-top: 1px solid #f3f4f6;
+}
+
+.dark .card-footer {
+    background: #111827;
+    border-top-color: #374151;
+}
+
+.metadata-tags {
+    display: flex;
+    flex-wrap: wrap;
+    gap: 0.5rem;
+}
+
+.tag {
+    display: inline-flex;
+    align-items: center;
+    gap: 0.25rem;
+    font-size: 0.75rem;
+    font-weight: 600;
+    padding: 0.375rem 0.75rem;
+    border-radius: 9999px;
+    transition: transform 0.2s ease;
+}
+
+.tag:hover {
+    transform: scale(1.05);
+}
+
+.tag-icon {
+    width: 0.875rem;
+    height: 0.875rem;
+    fill: currentColor;
+}
+
+.tag-year {
+    background: #dbeafe;
+    color: #1e40af;
+}
+
+.dark .tag-year {
+    background: #1e3a8a;
+    color: #93c5fd;
+}
+
+.tag-language {
+    background: #fce7f3;
+    color: #9f1239;
+}
+
+.dark .tag-language {
+    background: #831843;
+    color: #fbcfe8;
+}
+
+.tag-open-access {
+    background: #d1fae5;
+    color: #065f46;
+}
+
+.dark .tag-open-access {
+    background: #064e3b;
+    color: #6ee7b7;
+}
+
+/* Card Overlay */
+.card-overlay {
+    position: absolute;
+    top: 0;
+    left: 0;
+    right: 0;
+    bottom: 0;
+    background: linear-gradient(135deg, rgba(101, 220, 33, 0.1) 0%, rgba(53, 124, 6, 0.1) 100%);
+    opacity: 0;
+    transition: opacity 0.3s ease;
+    pointer-events: none;
+}
+
+.dataset-card:hover .card-overlay {
+    opacity: 1;
+}
+
+/* Empty State */
+.empty-state {
+    text-align: center;
+    padding: 4rem 2rem;
+    background: white;
+    border-radius: 1rem;
+    box-shadow: 0 1px 3px 0 rgba(0, 0, 0, 0.1);
+}
+
+.dark .empty-state {
+    background: #1f2937;
+}
+
+.empty-icon {
+    width: 4rem;
+    height: 4rem;
+    margin: 0 auto 1.5rem;
+    color: #d1d5db;
+}
+
+.dark .empty-icon {
+    color: #4b5563;
+}
+
+.empty-icon svg {
+    width: 100%;
+    height: 100%;
+}
+
+.empty-title {
+    font-size: 1.25rem;
+    font-weight: 600;
+    color: #1f2937;
+    margin-bottom: 0.5rem;
+}
+
+.dark .empty-title {
+    color: #f9fafb;
+}
+
+.empty-description {
+    color: #6b7280;
+    font-size: 0.875rem;
+}
+
+.dark .empty-description {
+    color: #9ca3af;
+}
+
+/* Responsive Design */
+@media (max-width: 640px) {
+    .results-grid {
+        grid-template-columns: 1fr;
+    }
+
+    .results-title {
+        font-size: 1.25rem;
+    }
+
+    .card-content {
+        padding: 1rem;
+    }
+}
+</style>

resources/js/Pages/Reviewer/Dataset/Index.vue

@@ -1,11 +1,12 @@
 <script setup lang="ts">
 import { Head, usePage } from '@inertiajs/vue3';
 import { ComputedRef } from 'vue';
-import { mdiAlertBoxOutline, mdiGlasses, mdiReiterate } from '@mdi/js';
+import { mdiAlertBoxOutline, mdiGlasses, mdiAccountArrowLeft, mdiChevronDown, mdiChevronUp } from '@mdi/js';
-import { computed } from 'vue';
+import { computed, ref, onMounted } from 'vue';
 import LayoutAuthenticated from '@/Layouts/LayoutAuthenticated.vue';
 import SectionMain from '@/Components/SectionMain.vue';
 import BaseButton from '@/Components/BaseButton.vue';
+import BaseIcon from '@/Components/BaseIcon.vue';
 import CardBox from '@/Components/CardBox.vue';
 import BaseButtons from '@/Components/BaseButtons.vue';
 import NotificationBar from '@/Components/NotificationBar.vue';
@@ -25,63 +26,83 @@ const props = defineProps({
         type: Object,
         default: () => ({}),
     },
-    // user: {
-    //     type: Object,
-    //     default: () => ({}),
-    // }
 });
 
 const flash: ComputedRef<any> = computed(() => {
-    // let test = usePage();
-    // console.log(test);
     return usePage().props.flash;
 });
 
+// Legend visibility state with localStorage persistence
+const showLegend = ref(true);
+
+onMounted(() => {
+    const savedState = localStorage.getItem('reviewerDatasetLegendVisible');
+    if (savedState !== null) {
+        showLegend.value = savedState === 'true';
+    }
+});
+
+const toggleLegend = () => {
+    showLegend.value = !showLegend.value;
+    localStorage.setItem('reviewerDatasetLegendVisible', String(showLegend.value));
+};
 
 const getRowClass = (dataset) => {
-    // (props.options ? 'select' : props.type)
+    // Return Tailwind classes that will be defined in tailwind.config
-    let rowclass = '';
+    const stateClasses = {
-    if (dataset.server_state == 'approved') {
+        'approved': 'bg-approved dark:bg-approved-dark',       
-        rowclass = 'bg-approved';
+        'rejected_reviewer': 'bg-rejected-reviewer dark:bg-rejected-reviewer-dark',
-    } else if (dataset.server_state == 'rejected_reviewer') {
+        'rejected_to_reviewer': 'bg-rejected-reviewer dark:bg-rejected-reviewer-dark',
-        rowclass = 'bg-rejected-reviewer';
+        'reviewed': 'bg-reviewed dark:bg-reviewed-dark',       
-    } else if (dataset.server_state == 'reviewed') {
+    };
-        rowclass = 'bg-reviewed';
+    
-    } else if (dataset.server_state == 'released') {
+    return stateClasses[dataset.server_state] || '';
-        rowclass = 'bg-released';
-    } else if (dataset.server_state == 'published') {
-        rowclass = 'bg-published';
-    } else if (dataset.server_state == 'rejected_to_reviewer') {
-        rowclass = 'bg-rejected-reviewer';
-    } else {
-        rowclass = '';
-    }
-    return rowclass;
 };
 
-// New method to format server state
+// Method to get state badge color
-const formatServerState = (state: string) => {
+const getStateColor = (state: string) => {
-    if (state === 'inprogress') {
+    const stateColors = {
-        return 'draft';
+        'inprogress': 'bg-sky-200 text-sky-900 dark:bg-sky-900 dark:text-sky-200',
-    } else if (state === 'released') {
+        'released': 'bg-blue-300 text-blue-900 dark:bg-blue-900 dark:text-blue-200',
-        return 'submitted';
+        'editor_accepted': 'bg-teal-200 text-teal-900 dark:bg-teal-900 dark:text-teal-200',
-    } else if (state === 'approved') {
+        'rejected_reviewer': 'bg-amber-200 text-amber-900 dark:bg-amber-900 dark:text-amber-200',
-        return 'ready for review';
+        'rejected_to_reviewer': 'bg-yellow-200 text-yellow-900 dark:bg-yellow-900 dark:text-yellow-200', 
-    } else if (state === 'reviewer_accepted') {
+         'rejected_editor': 'bg-rose-300 text-rose-900 dark:bg-rose-900 dark:text-rose-200',
-        return 'in review';
+        'reviewed': 'bg-yellow-300 text-yellow-900 dark:bg-yellow-900 dark:text-yellow-200',
-    }
+        'published': 'bg-green-300 text-green-900 dark:bg-green-900 dark:text-green-200',
-    return state; // Return the original state for other cases
+        'approved': 'bg-cyan-200 text-cyan-900 dark:bg-cyan-900 dark:text-cyan-200',
+        'reviewer_accepted': 'bg-lime-200 text-lime-900 dark:bg-lime-900 dark:text-lime-200',
+    };
+    return stateColors[state] || 'bg-sky-200 text-sky-900 dark:bg-sky-900 dark:text-sky-200';
 };
 
 
+
+const truncateTitle = (text: string, length = 50) => {
+    if (!text) return '';
+    return text.length > length ? text.substring(0, length) + '...' : text;
+};
+
+// Dynamic legend definitions
+const datasetStates = [
+    { key: 'approved', label: 'Ready for Review' },
+    { key: 'rejected_to_reviewer', label: 'Rejected To Reviewer' }   
+];
+const getLabel = (key: string) => {
+  return datasetStates.find(s => s.key === key)?.label || 'Unknown'
+}
+
+const availableActions = [
+    { icon: mdiGlasses, label: 'View / Review', color: 'text-blue-500' },
+    { icon: mdiAccountArrowLeft, label: 'Reject to Editor', color: 'text-yellow-600' },
+];
+
 </script>
 
 <template>
     <LayoutAuthenticated>
-
+        <Head title="Reviewer Datasets" />
-        <Head title="Dataset List" />
         <SectionMain>
-            <!-- <FormValidationErrors v-bind:errors="errors" /> -->
             <NotificationBar v-if="flash.message" color="success" :icon="mdiAlertBoxOutline">
                 {{ flash.message }}
             </NotificationBar>
@@ -92,86 +113,162 @@ const formatServerState = (state: string) => {
                 {{ flash.error }}
             </NotificationBar>
 
+            <!-- Legend -->
+            <CardBox class="mb-4">
+                <!-- Legend Header with Toggle -->
+                <!-- <div 
+                    class="flex items-center justify-between cursor-pointer select-none p-4 border-b border-gray-200 dark:border-slate-700 hover:bg-gray-50 dark:hover:bg-slate-800/50 transition-colors"
+                    @click="toggleLegend"
+                >
+                    <div class="flex items-center gap-2">
+                        <svg class="w-5 h-5 text-gray-600 dark:text-gray-400" fill="none" stroke="currentColor" viewBox="0 0 24 24">
+                            <path stroke-linecap="round" stroke-linejoin="round" stroke-width="2" d="M13 16h-1v-4h-1m1-4h.01M21 12a9 9 0 11-18 0 9 9 0 0118 0z" />
+                        </svg>
+                        <h3 class="text-sm font-semibold text-gray-700 dark:text-gray-300">
+                            Legend - States & Actions
+                        </h3>
+                    </div>
+                    <div class="flex items-center gap-2">
+                        <span class="text-xs text-gray-500 dark:text-gray-400">
+                            {{ showLegend ? 'Click to hide' : 'Click to show' }}
+                        </span>
+                        <BaseIcon 
+                            :path="showLegend ? mdiChevronUp : mdiChevronDown" 
+                            :size="20" 
+                            class="text-gray-500 dark:text-gray-400 transition-transform"
+                        />
+                    </div>
+                </div> -->
+
+                <!-- Collapsible Legend Content -->
+                <transition
+                    enter-active-class="transition-all duration-300 ease-out"
+                    enter-from-class="max-h-0 opacity-0"
+                    enter-to-class="max-h-96 opacity-100"
+                    leave-active-class="transition-all duration-300 ease-in"
+                    leave-from-class="max-h-96 opacity-100"
+                    leave-to-class="max-h-0 opacity-0"
+                >
+                    <div v-show="showLegend" class="overflow-hidden">
+                        <div class="grid grid-cols-1 md:grid-cols-2 gap-6 p-4">
+                            <!-- State Colors Legend -->
+                            <div>
+                                <h3 class="text-sm font-semibold text-gray-700 dark:text-gray-300 mb-3 flex items-center gap-2">
+                                    <svg class="w-4 h-4" fill="none" stroke="currentColor" viewBox="0 0 24 24">
+                                        <path stroke-linecap="round" stroke-linejoin="round" stroke-width="2" d="M7 7h.01M7 3h5c.512 0 1.024.195 1.414.586l7 7a2 2 0 010 2.828l-7 7a2 2 0 01-2.828 0l-7-7A1.994 1.994 0 013 12V7a4 4 0 014-4z" />
+                                    </svg>
+                                    Dataset States
+                                </h3>
+                                <div class="grid grid-cols-2 gap-2 text-xs">
+                                    <div v-for="state in datasetStates" :key="state.key" class="flex items-center gap-2">
+                                        <span class="inline-flex items-center px-2 py-0.5 rounded-full" :class="getStateColor(state.key)">
+                                            {{ state.label }}
+                                        </span>
+                                    </div>
+                                </div>
+                            </div>
+
+                            <!-- Actions Legend -->
+                            <div>
+                                <h3 class="text-sm font-semibold text-gray-700 dark:text-gray-300 mb-3 flex items-center gap-2">
+                                    <svg class="w-4 h-4" fill="none" stroke="currentColor" viewBox="0 0 24 24">
+                                        <path stroke-linecap="round" stroke-linejoin="round" stroke-width="2" d="M13 10V3L4 14h7v7l9-11h-7z" />
+                                    </svg>
+                                    Available Actions
+                                </h3>
+                                <div class="grid grid-cols-1 gap-1.5 text-xs">
+                                    <div v-for="action in availableActions" :key="action.label" class="flex items-center gap-2">
+                                        <BaseIcon :path="action.icon" :size="16" :class="action.color" />
+                                        <span class="text-gray-700 dark:text-gray-300">{{ action.label }}</span>
+                                    </div>
+                                </div>
+                            </div>
+                        </div>
+                    </div>
+                </transition>
+            </CardBox>
+
             <!-- table -->
             <CardBox class="mb-6" has-table>
                 <div v-if="props.datasets.data.length > 0">
                     <table>
                         <thead>
                             <tr>
-                                <th scope="col" class="py-3 text-left text-xs font-medium uppercase tracking-wider dark:text-white">
+                                <th>Title</th>
-                                    <!-- <Sort label="Dataset Title" attribute="title" :search="form.search" /> -->
+                                <th>ID</th>
-                                    Title
+                                <th>State</th>
-                                </th>
+                                <th>Editor</th>
-                                <th scope="col" class="py-3 text-left text-xs font-medium uppercase tracking-wider dark:text-white">
+                                <th>Remaining Time</th>
-                                    ID
+                                <th v-if="can.edit || can.delete">Actions</th>
-                                </th>
-                                <th scope="col" class="py-3 text-left text-xs font-medium uppercase tracking-wider dark:text-white">
-                                    <!-- <Sort label="Email" attribute="email" :search="form.search" /> -->
-                                    State
-                                </th>
-
-                                <th scope="col" class="py-3 text-left text-xs font-medium uppercase tracking-wider">
-                                    Editor
-                                </th>
-                                <th scope="col" class="py-3 text-left text-xs font-medium uppercase tracking-wider dark:text-white">
-                                   Remaining Time
-                                </th>
-                                <th scope="col" class="relative px-6 py-3 dark:text-white" v-if="can.edit || can.delete">
-                                    <span class="sr-only">Actions</span>
-                                </th>
                             </tr>
                         </thead>
 
                         <tbody>
-                            <tr v-for="dataset in props.datasets.data" :key="dataset.id" :class="[getRowClass(dataset)]">
+                            <tr v-for="dataset in props.datasets.data" :key="dataset.id"
-                                <td data-label="Login"
+                                :class="['hover:bg-gray-50 dark:hover:bg-slate-800 transition-colors', getRowClass(dataset)]">
-                                    class="py-4 whitespace-nowrap text-gray-700">                                   
+                                <td data-label="Title">
-                                    <div class="text-sm table-title">{{ dataset.main_title }}</div>
+                                    <div class="max-w-xs">
+                                        <span 
+                                            class="text-gray-700 dark:text-gray-300 text-sm font-medium"
+                                            :title="dataset.main_title"
+                                        >
+                                            {{ truncateTitle(dataset.main_title) }}
+                                        </span>
+                                    </div>
                                 </td>
-                                <td class="py-4 whitespace-nowrap text-gray-700">
+                                <td data-label="ID">
-                                    <div class="text-sm">{{ dataset.id }}</div>
+                                    <span class="text-sm text-gray-700 dark:text-gray-300 font-mono">
+                                        {{ dataset.id }}
+                                    </span>
                                 </td>
-                                <td class="py-4 whitespace-nowrap text-gray-700">
+                                <td data-label="State">
-                                    <div class="text-sm">{{ formatServerState(dataset.server_state) }}</div>
+                                    <div class="flex items-center gap-2">
-                                    <div v-if="dataset.server_state === 'rejected_to_reviewer' && dataset.reject_editor_note"
+                                        <span class="inline-flex items-center px-2.5 py-0.5 rounded-full text-xs font-medium capitalize"
-                                        class="inline-block relative ml-2 group">
+                                            :class="getStateColor(dataset.server_state)">
-                                        <button
+                                            {{ getLabel(dataset.server_state) }}
-                                            class="w-5 h-5 rounded-full bg-gray-200 text-gray-600 text-xs flex items-center justify-center focus:outline-none hover:bg-gray-300">
+                                        </span>
-                                            i
+                                        <div v-if="dataset.server_state === 'rejected_to_reviewer' && dataset.reject_editor_note"
-                                        </button>
+                                            class="relative group">
-                                        <div
+                                            <button
-                                            class="absolute left-0 top-full mt-1 w-64 bg-white shadow-lg rounded-md p-3 text-xs text-left z-50 transform scale-0 origin-top-left transition-transform duration-100 group-hover:scale-100">
+                                                class="w-5 h-5 rounded-full bg-gray-200 dark:bg-slate-700 text-gray-600 dark:text-gray-300 text-xs flex items-center justify-center focus:outline-none hover:bg-gray-300 dark:hover:bg-slate-600 transition-colors">
-                                            <p class="text-gray-700 max-h-40 overflow-y-auto overflow-x-hidden whitespace-normal break-words">
+                                                i
-                                                {{ dataset.reject_editor_note }}
+                                            </button>
-                                            </p>
+                                            <div
-                                            <div class="absolute -top-1 left-1 w-2 h-2 bg-white transform rotate-45">
+                                                class="absolute left-0 top-full mt-1 w-64 bg-white dark:bg-slate-800 shadow-lg rounded-md p-3 text-xs text-left z-50 transform scale-0 origin-top-left transition-transform duration-100 group-hover:scale-100 border border-gray-200 dark:border-slate-700">
+                                                <p class="text-gray-700 dark:text-gray-300 max-h-40 overflow-y-auto overflow-x-hidden whitespace-normal break-words">
+                                                    {{ dataset.reject_editor_note }}
+                                                </p>
+                                                <div class="absolute -top-1 left-1 w-2 h-2 bg-white dark:bg-slate-800 border-l border-t border-gray-200 dark:border-slate-700 transform rotate-45">
+                                                </div>
                                             </div>
                                         </div>
                                     </div>
                                 </td>
 
-                               
+                                <td data-label="Editor">
-                                <td class="py-4 whitespace-nowrap text-gray-700">
+                                    <span class="text-sm text-gray-700 dark:text-gray-300">
-                                    <div class="text-sm">{{ dataset.editor?.login }}</div>
+                                        {{ dataset.editor?.login || '—' }}
+                                    </span>
                                 </td>
 
-                                <td data-label="modified" class="py-4 whitespace-nowrap text-gray-700">
+                                <td data-label="Remaining Time">
-                                    <div class="text-sm" :title="dataset.remaining_time">
+                                    <span class="text-sm text-gray-600 dark:text-gray-400" :title="dataset.remaining_time">
-                                        {{ dataset.remaining_time + ' days' }}
+                                        {{ dataset.remaining_time }} days
-                                    </div>
+                                    </span>
                                 </td>
-                                <td
+                                <td v-if="can.reject" class="before:hidden lg:w-1 whitespace-nowrap">
-                                    class="py-4 whitespace-nowrap text-right text-sm font-medium text-gray-700">
                                     <BaseButtons type="justify-start lg:justify-end" no-wrap>
                                         <BaseButton 
                                             v-if="can.reject && (dataset.server_state == 'approved' || dataset.server_state == 'rejected_to_reviewer')"
                                             :route-name="stardust.route('reviewer.dataset.review', [dataset.id])"
-                                            color="info" :icon="mdiGlasses" :label="'View'" small />
+                                            color="info" :icon="mdiGlasses" small 
+                                            title="View / Review" />
                                         
                                         <BaseButton
                                             v-if="can.reject && (dataset.server_state == 'approved' || dataset.server_state == 'rejected_to_reviewer')"
                                             :route-name="stardust.route('reviewer.dataset.reject', [dataset.id])"
-                                            color="info" :icon="mdiReiterate" :label="'Reject'" small />
+                                            color="warning" :icon="mdiAccountArrowLeft" small 
+                                            title="Reject to Editor" />
                                     </BaseButtons>
                                 </td>
                             </tr>
@@ -179,21 +276,16 @@ const formatServerState = (state: string) => {
                     </table>
                 </div>
                 <div v-else>
-                    <!-- Show warning message if datasets are not defined or empty -->
+                    <div class="text-center py-12">
-                    <div class="bg-yellow-200 text-yellow-800 rounded-md p-4">
+                        <div class="flex flex-col items-center justify-center text-gray-500 dark:text-gray-400">
-                        <p>No datasets defined.</p>
+                            <p class="text-lg font-medium mb-2">No datasets found</p>
-                        <!-- You can add more descriptive text here -->
+                            <p class="text-sm">Datasets will appear here when they are ready for review</p>
+                        </div>
                     </div>
                 </div>
 
-
-                <!-- <BaseButton
-                                        v-if="can.edit && (dataset.server_state == 'editor_accepted' || dataset.server_state == 'rejected_reviewer')"
-                                        :route-name="stardust.route('editor.dataset.edit', [dataset.id])" color="info"
-                                        :icon="mdiSquareEditOutline" :label="'Edit'" small />  -->
                 <div class="py-4">
                     <Pagination v-bind:data="datasets.meta" />
-
                 </div>
             </CardBox>
         </SectionMain>
@@ -201,15 +293,24 @@ const formatServerState = (state: string) => {
 </template>
 
 <style scoped lang="css">
-.table-title {
+/* Background colors are now defined in tailwind.config.js */
-    max-width: 200px;
+/* .bg-approved {
-    /* set a maximum width */
+    @apply bg-approved dark:bg-approved-dark;
-    overflow: hidden;
-    /* hide overflow */
-    text-overflow: ellipsis;
-    /* show ellipsis for overflowed text */
-    white-space: nowrap;
-    /* prevent wrapping */
 }
 
+.bg-rejected-reviewer {
+    @apply bg-rejected-reviewer dark:bg-rejected-reviewer-dark;
+}
+
+.bg-reviewed {
+    @apply bg-reviewed dark:bg-reviewed-dark;
+}
+
+.bg-released {
+    @apply bg-released dark:bg-released-dark;
+}
+
+.bg-published {
+    @apply bg-published dark:bg-published-dark;
+} */
 </style>

resources/js/Pages/Submitter/Dataset/Create.vue

@@ -725,7 +725,7 @@ Removes a selected keyword
                                         </div>
                                     </FormControl>
                                 </FormField>
-                                <FormField label="Main Title Language*" help="required: main abstract language"
+                                <FormField label="Main Description Language*" help="required: main abstract language"
                                     :class="{ 'text-red-400': form.errors['descriptions.0.language'] }"
                                     class="w-full mx-2 flex-1">
                                     <FormControl required v-model="form.descriptions[0].language" type="text"

resources/js/Pages/Submitter/Dataset/Index.vue

@@ -1,17 +1,18 @@
 <script setup lang="ts">
-// import { Head, Link, useForm, usePage } from '@inertiajs/inertia-vue3';
 import { Head, usePage } from '@inertiajs/vue3';
 import { ComputedRef } from 'vue';
-import { mdiSquareEditOutline, mdiTrashCan, mdiAlertBoxOutline, mdiLockOpen, mdiLibraryShelves } from '@mdi/js';
+import { mdiSquareEditOutline, mdiTrashCan, mdiAlertBoxOutline, mdiLockOpen, mdiLibraryShelves, mdiChevronDown, mdiChevronUp } from '@mdi/js';
-import { computed } from 'vue';
+import { computed, ref, onMounted } from 'vue';
 import LayoutAuthenticated from '@/Layouts/LayoutAuthenticated.vue';
 import SectionMain from '@/Components/SectionMain.vue';
 import BaseButton from '@/Components/BaseButton.vue';
+import BaseIcon from '@/Components/BaseIcon.vue';
 import CardBox from '@/Components/CardBox.vue';
 import BaseButtons from '@/Components/BaseButtons.vue';
 import NotificationBar from '@/Components/NotificationBar.vue';
 import Pagination from '@/Components/Pagination.vue';
 import { stardust } from '@eidellev/adonis-stardust/client';
+import Label from '@/Components/unused/Label.vue';
 
 const props = defineProps({
     datasets: {
@@ -26,63 +27,120 @@ const props = defineProps({
         type: Object,
         default: () => ({}),
     },
-    // user: {
-    //     type: Object,
-    //     default: () => ({}),
-    // }
 });
 
 const flash: ComputedRef<any> = computed(() => {
-    // let test = usePage();
-    // console.log(test);
     return usePage().props.flash;
 });
 
+// Legend visibility state with localStorage persistence
+const showLegend = ref(true);
+
+onMounted(() => {
+    const savedState = localStorage.getItem('submitterDatasetLegendVisible');
+    if (savedState !== null) {
+        showLegend.value = savedState === 'true';
+    }
+});
+
+const toggleLegend = () => {
+    showLegend.value = !showLegend.value;
+    localStorage.setItem('submitterDatasetLegendVisible', String(showLegend.value));
+};
+
 const validStates = ['inprogress', 'rejected_editor'];
 
+
 const getRowClass = (dataset) => {
-    // (props.options ? 'select' : props.type)
+    // Return Tailwind classes that will be defined in tailwind.config
-    let rowclass = '';
+    const stateClasses = {
-    if (dataset.server_state == 'inprogress') {
+        'inprogress': 'bg-inprogress dark:bg-inprogress-dark',
-        rowclass = 'bg-inprogress';
+        'released': 'bg-released dark:bg-released-dark',
-    } else if (dataset.server_state == 'released') {
+        'editor_accepted': 'bg-editor-accepted dark:bg-editor-accepted-dark',
-        rowclass = 'bg-released';
+        'rejected_reviewer': 'bg-rejected-reviewer dark:bg-rejected-reviewer-dark',
-    } else if (dataset.server_state == 'editor_accepted' || dataset.server_state == 'rejected_reviewer') {
+         'rejected_to_reviewer': 'bg-rejected-reviewer dark:bg-rejected-reviewer-dark',
-        rowclass = 'bg-editor-accepted';
+       
-    } else if (dataset.server_state == 'approved') {
+        'approved': 'bg-approved dark:bg-approved-dark',
-        rowclass = 'bg-approved';
+        'reviewed': 'bg-reviewed dark:bg-reviewed-dark',
-    } else if (dataset.server_state == 'reviewed') {
+        'published': 'bg-published dark:bg-published-dark',
-        rowclass = 'bg-reviewed';
+        'rejected_editor': 'bg-rejected-editor dark:bg-rejected-editor-dark',
-    } else if (dataset.server_state == 'rejected_editor') {
+    };
-        rowclass = 'bg-rejected-editor';
+    
-    } else {
+    return stateClasses[dataset.server_state] || '';
-        rowclass = '';
-    }
-    return rowclass;
 };
 
+
 // New method to format server state
-const formatServerState = (state: string) => {
+// const formatServerState = (state: string) => {
-    if (state === 'inprogress') {
+//     if (state === 'inprogress') {
-        return 'draft';
+//         return 'draft';
-    } else if (state === 'released') {
+//     } else if (state === 'released') {
-        return 'submitted';
+//         return 'submitted';
-    } else if (state === 'approved') {
+//     } else if (state === 'editor_accepted') {
-        return 'ready for review';
+//         return 'in approval';
-    } else if (state === 'reviewer_accepted') {
+//     } else if (state === 'approved') {
-        return 'in review';
+//         return 'ready for review';
-    }
+//     } else if (state === 'reviewer_accepted') {
-    return state; // Return the original state for other cases
+//         return 'in review';
+//     } else if (state === 'rejected_editor') {
+//         return 'rejected by editor';
+//     }
+//     return state;
+// };
+
+// Method to get state badge color
+// Method to get state badge color
+
+const getStateColor = (state: string) => {
+    const stateColors = {
+        'inprogress': 'bg-sky-200 text-sky-900 dark:bg-sky-900 dark:text-sky-200',
+        'released': 'bg-blue-300 text-blue-900 dark:bg-blue-900 dark:text-blue-200',
+        'editor_accepted': 'bg-teal-200 text-teal-900 dark:bg-teal-900 dark:text-teal-200',
+        'rejected_reviewer': 'bg-amber-200 text-amber-900 dark:bg-amber-900 dark:text-amber-200',
+        'rejected_to_reviewer': 'bg-yellow-200 text-yellow-900 dark:bg-yellow-900 dark:text-yellow-200', 
+         'rejected_editor': 'bg-rose-300 text-rose-900 dark:bg-rose-900 dark:text-rose-200',
+        'reviewed': 'bg-yellow-300 text-yellow-900 dark:bg-yellow-900 dark:text-yellow-200',
+        'published': 'bg-green-300 text-green-900 dark:bg-green-900 dark:text-green-200',
+        'approved': 'bg-cyan-200 text-cyan-900 dark:bg-cyan-900 dark:text-cyan-200',
+        'reviewer_accepted': 'bg-lime-200 text-lime-900 dark:bg-lime-900 dark:text-lime-200',
+    };
+    return stateColors[state] || 'bg-sky-200 text-sky-900 dark:bg-sky-900 dark:text-sky-200';
 };
 
+// Dynamic legend definitions
+const datasetStates = [
+    { key: 'inprogress', label: 'Draft' },
+    { key: 'released', label: 'Submitted' },
+    { key: 'editor_accepted', label: 'In Approval' },
+    { key: 'approved', label: 'Ready for Review' },
+    { key: 'reviewer_accepted', label: 'In Review' },
+    { key: 'reviewed', label: 'Reviewed' },
+    // { key: 'published', label: 'Published' },
+    { key: 'rejected_editor', label: 'Rejected by Editor' },
+    { key: 'rejected_reviewer', label: 'Rejected by Reviewer' },
+    { key: 'rejected_to_reviewer', label: 'Rejected To Reviewer' }
+];
+const getLabel = (key: string) => {
+  return datasetStates.find(s => s.key === key)?.label || 'Unknown'
+}
+
+const availableActions = [
+    { icon: mdiLockOpen, label: 'Release (Submit)', color: 'text-blue-500' },
+    { icon: mdiSquareEditOutline, label: 'Edit', color: 'text-blue-500' },
+    { icon: mdiLibraryShelves, label: 'Classify', color: 'text-blue-500' },
+    { icon: mdiTrashCan, label: 'Delete', color: 'text-red-500' },
+];
+
+const truncateTitle = (text: string, length = 50) => {
+    if (!text) return '';
+    return text.length > length ? text.substring(0, length) + '...' : text;
+};
 </script>
 
 <template>
     <LayoutAuthenticated>
-
+        <Head title="My Datasets" />
-        <Head title="Dataset List" />
         <SectionMain>
-            <!-- <FormValidationErrors v-bind:errors="errors" /> -->
             <NotificationBar v-if="flash.message" color="success" :icon="mdiAlertBoxOutline">
                 {{ flash.message }}
             </NotificationBar>
@@ -90,86 +148,170 @@ const formatServerState = (state: string) => {
                 {{ flash.warning }}
             </NotificationBar>
 
-            <!-- table -->
+            <!-- Legend -->
-            <CardBox class="mb-6" has-table>
+            <CardBox class="mb-4">
-                <table class="w-full table-fixed">
+                <!-- Legend Header with Toggle -->
-                    <thead>
+                <div 
-                        <tr>
+                    class="flex items-center justify-between cursor-pointer select-none p-4 border-b border-gray-200 dark:border-slate-700 hover:bg-gray-50 dark:hover:bg-slate-800/50 transition-colors"
-                            <th scope="col" class="py-3 text-left text-xs font-medium uppercase tracking-wider dark:text-white">
+                    @click="toggleLegend"
-                                <!-- <Sort label="Dataset Title" attribute="title" :search="form.search" /> -->
+                >
-                                Dataset Title
+                    <div class="flex items-center gap-2">
-                            </th>
+                        <svg class="w-5 h-5 text-gray-600 dark:text-gray-400" fill="none" stroke="currentColor" viewBox="0 0 24 24">
-                            <th scope="col" class="py-3 text-left text-xs font-medium uppercase tracking-wider dark:text-white">
+                            <path stroke-linecap="round" stroke-linejoin="round" stroke-width="2" d="M13 16h-1v-4h-1m1-4h.01M21 12a9 9 0 11-18 0 9 9 0 0118 0z" />
-                                <!-- <Sort label="Email" attribute="email" :search="form.search" /> -->
+                        </svg>
-                                Server State
+                        <h3 class="text-sm font-semibold text-gray-700 dark:text-gray-300">
-                            </th>
+                            Legend - States & Actions
-                            <th scope="col" class="py-3 text-left text-xs font-medium uppercase tracking-wider dark:text-white">
+                        </h3>
-                                Date of last modification
+                    </div>
-                            </th>
+                    <div class="flex items-center gap-2">
-                            <th scope="col" class="relative px-6 py-3 dark:text-white" v-if="can.edit || can.delete">
+                        <span class="text-xs text-gray-500 dark:text-gray-400">
-                                <span class="sr-only">Actions</span>
+                            {{ showLegend ? 'Click to hide' : 'Click to show' }}
-                            </th>
+                        </span>
-                        </tr>
+                        <BaseIcon 
-                    </thead>
+                            :path="showLegend ? mdiChevronUp : mdiChevronDown" 
+                            :size="20" 
+                            class="text-gray-500 dark:text-gray-400 transition-transform"
+                        />
+                    </div>
+                </div>
 
-                    <tbody class="bg-white divide-y divide-gray-200">
+                <!-- Collapsible Legend Content -->
-                        <tr v-for="dataset in props.datasets.data" :key="dataset.id" :class="getRowClass(dataset)">
+                <transition
-                            <td data-label="Login"
+                    enter-active-class="transition-all duration-300 ease-out"
-                                class="py-4 whitespace-nowrap text-gray-700 table-title">
+                    enter-from-class="max-h-0 opacity-0"
-                                <!-- <Link v-bind:href="stardust.route('settings.user.show', [user.id])"
+                    enter-to-class="max-h-96 opacity-100"
-                                    class="no-underline hover:underline text-cyan-600 dark:text-cyan-400">
+                    leave-active-class="transition-all duration-300 ease-in"
-                                {{ user.login }}
+                    leave-from-class="max-h-96 opacity-100"
-                                </Link> -->
+                    leave-to-class="max-h-0 opacity-0"
-                                <!-- {{ user.id }} -->
+                >
-                                {{ dataset.main_title }}                                
+                    <div v-show="showLegend" class="overflow-hidden">
-                            </td>
+                        <div class="grid grid-cols-1 md:grid-cols-2 gap-6 p-4">
-                            <td class="py-4 whitespace-nowrap text-gray-700">
+                            <!-- State Colors Legend -->
-                                {{ formatServerState(dataset.server_state) }}
+                            <div>
-                                <div v-if="dataset.server_state === 'rejected_editor' && dataset.reject_editor_note"
+                                <h3 class="text-sm font-semibold text-gray-700 dark:text-gray-300 mb-3 flex items-center gap-2">
-                                    class="inline-block relative ml-2 group">
+                                    <svg class="w-4 h-4" fill="none" stroke="currentColor" viewBox="0 0 24 24">
-                                    <button
+                                        <path stroke-linecap="round" stroke-linejoin="round" stroke-width="2" d="M7 7h.01M7 3h5c.512 0 1.024.195 1.414.586l7 7a2 2 0 010 2.828l-7 7a2 2 0 01-2.828 0l-7-7A1.994 1.994 0 013 12V7a4 4 0 014-4z" />
-                                        class="w-5 h-5 rounded-full bg-gray-200 text-gray-600 text-xs flex items-center justify-center focus:outline-none hover:bg-gray-300">
+                                    </svg>
-                                        i
+                                    Dataset States
-                                    </button>
+                                </h3>
-                                    <div
+                                <div class="grid grid-cols-2 gap-2 text-xs">
-                                        class="absolute left-0 top-full mt-1 w-64 bg-white shadow-lg rounded-md p-3 text-xs text-left z-50 transform scale-0 origin-top-left transition-transform duration-100 group-hover:scale-100">
+                                    <div v-for="state in datasetStates" :key="state.key" class="flex items-center gap-2">
-                                        <p
+                                        <span class="inline-flex items-center px-2 py-0.5 rounded-full" :class="getStateColor(state.key)">
-                                            class="text-gray-700 max-h-40 overflow-y-auto overflow-x-hidden whitespace-normal break-words">
+                                            {{ state.label }}
-                                            {{ dataset.reject_editor_note }}
+                                        </span>
-                                        </p>
-                                        <div class="absolute -top-1 left-1 w-2 h-2 bg-white transform rotate-45">
-                                        </div>
                                     </div>
                                 </div>
-                            </td>
+                            </div>
 
-                            <td data-label="modified" class="py-4 whitespace-nowrap text-gray-700">
+                            <!-- Actions Legend -->
-                                <div class="text-sm" :title="dataset.server_date_modified">
+                            <div>
-                                    {{ dataset.server_date_modified }}
+                                <h3 class="text-sm font-semibold text-gray-700 dark:text-gray-300 mb-3 flex items-center gap-2">
+                                    <svg class="w-4 h-4" fill="none" stroke="currentColor" viewBox="0 0 24 24">
+                                        <path stroke-linecap="round" stroke-linejoin="round" stroke-width="2" d="M13 10V3L4 14h7v7l9-11h-7z" />
+                                    </svg>
+                                    Available Actions
+                                </h3>
+                                <div class="grid grid-cols-1 gap-1.5 text-xs">
+                                    <div v-for="action in availableActions" :key="action.label" class="flex items-center gap-2">
+                                        <BaseIcon :path="action.icon" :size="16" :class="action.color" />
+                                        <span class="text-gray-700 dark:text-gray-300">{{ action.label }}</span>
+                                    </div>
                                 </div>
-                            </td>
+                            </div>
-                            <td
+                        </div>
-                                class="py-4 whitespace-nowrap text-right text-sm font-medium text-gray-700">
+                    </div>
-                                <BaseButtons v-if="validStates.includes(dataset.server_state)"
+                </transition>
-                                    type="justify-start lg:justify-end" no-wrap>
+            </CardBox>
-                                    <!-- release created dataset -->
+
-                                    <BaseButton v-if="can.edit"
+            <!-- table -->
-                                        :route-name="stardust.route('dataset.release', [dataset.id])" color="info"
+            <CardBox class="mb-6" has-table>
-                                        :icon="mdiLockOpen" :label="'Release'" small />
+                <div v-if="props.datasets.data.length > 0">
-                                    <BaseButton v-if="can.edit"
+                    <table>
-                                        :route-name="stardust.route('dataset.edit', [dataset.id])" color="info"
+                        <thead>
-                                        :icon="mdiSquareEditOutline" :label="'Edit'" small />
+                            <tr>
-                                    <BaseButton v-if="can.edit"
+                                <th>Title</th>
-                                        :route-name="stardust.route('dataset.categorize', [dataset.id])" color="info"
+                                <th>State</th>
-                                        :icon="mdiLibraryShelves" :label="'Classify'" small />
+                                <th>Modified</th>
-                                    <BaseButton v-if="can.delete" color="danger"
+                                <th v-if="can.edit || can.delete">Actions</th>
-                                        :route-name="stardust.route('dataset.delete', [dataset.id])" :icon="mdiTrashCan"
+                            </tr>
-                                        small />
+                        </thead>
-                                </BaseButtons>
+
-                            </td>
+                        <tbody>
-                        </tr>
+                            <tr v-for="dataset in props.datasets.data" :key="dataset.id"
-                    </tbody>
+                                :class="['hover:bg-gray-50 dark:hover:bg-slate-800 transition-colors', getRowClass(dataset)]">
-                </table>
+                                <td data-label="Title">
+                                    <div class="max-w-xs">
+                                        <span 
+                                            class="text-gray-700 dark:text-gray-300 text-sm font-medium"
+                                            :title="dataset.main_title"
+                                        >
+                                            {{ truncateTitle(dataset.main_title) }}
+                                        </span>
+                                    </div>
+                                </td>
+                                <td data-label="State">
+                                    <div class="flex items-center gap-2">
+                                        <span class="inline-flex items-center px-2.5 py-0.5 rounded-full text-xs font-medium capitalize"
+                                            :class="getStateColor(dataset.server_state)">
+                                            {{ getLabel(dataset.server_state) }}
+                                        </span>
+                                        <div v-if="dataset.server_state === 'rejected_editor' && dataset.reject_editor_note"
+                                            class="relative group">
+                                            <button
+                                                class="w-5 h-5 rounded-full bg-gray-200 dark:bg-slate-700 text-gray-600 dark:text-gray-300 text-xs flex items-center justify-center focus:outline-none hover:bg-gray-300 dark:hover:bg-slate-600 transition-colors">
+                                                i
+                                            </button>
+                                            <div
+                                                class="absolute left-0 top-full mt-1 w-64 bg-white dark:bg-slate-800 shadow-lg rounded-md p-3 text-xs text-left z-50 transform scale-0 origin-top-left transition-transform duration-100 group-hover:scale-100 border border-gray-200 dark:border-slate-700">
+                                                <p class="text-gray-700 dark:text-gray-300 max-h-40 overflow-y-auto overflow-x-hidden whitespace-normal break-words">
+                                                    {{ dataset.reject_editor_note }}
+                                                </p>
+                                                <div class="absolute -top-1 left-1 w-2 h-2 bg-white dark:bg-slate-800 border-l border-t border-gray-200 dark:border-slate-700 transform rotate-45">
+                                                </div>
+                                            </div>
+                                        </div>
+                                    </div>
+                                </td>
+
+                                <td data-label="Modified">
+                                    <span class="text-sm text-gray-600 dark:text-gray-400" :title="dataset.server_date_modified">
+                                        {{ dataset.server_date_modified }}
+                                    </span>
+                                </td>
+                                <td v-if="can.edit || can.delete" class="before:hidden lg:w-1 whitespace-nowrap">
+                                    <BaseButtons v-if="validStates.includes(dataset.server_state)"
+                                        type="justify-start lg:justify-end" no-wrap>
+                                        <BaseButton v-if="can.edit"
+                                            :route-name="stardust.route('dataset.release', [dataset.id])" color="info"
+                                            :icon="mdiLockOpen" small 
+                                            title="Release (Submit)" />
+                                        <BaseButton v-if="can.edit"
+                                            :route-name="stardust.route('dataset.edit', [dataset.id])" color="info"
+                                            :icon="mdiSquareEditOutline" small 
+                                            title="Edit" />
+                                        <BaseButton v-if="can.edit"
+                                            :route-name="stardust.route('dataset.categorize', [dataset.id])" color="info"
+                                            :icon="mdiLibraryShelves" small 
+                                            title="Classify" />
+                                        <BaseButton v-if="can.delete" color="danger"
+                                            :route-name="stardust.route('dataset.delete', [dataset.id])" :icon="mdiTrashCan"
+                                            small 
+                                            title="Delete" />
+                                    </BaseButtons>
+                                </td>
+                            </tr>
+                        </tbody>
+                    </table>
+                </div>
+                <div v-else>
+                    <div class="text-center py-12">
+                        <div class="flex flex-col items-center justify-center text-gray-500 dark:text-gray-400">
+                            <p class="text-lg font-medium mb-2">No datasets found</p>
+                            <p class="text-sm">Create your first dataset to get started</p>
+                        </div>
+                    </div>
+                </div>
+
                 <div class="py-4">
                     <Pagination v-bind:data="datasets.meta" />
                 </div>
@@ -179,56 +321,28 @@ const formatServerState = (state: string) => {
 </template>
 
 <style scoped lang="css">
-.table-title {
+/* Background colors are now defined in tailwind.config.js */
-    max-width: 200px;
+/* .bg-inprogress {
-    /* set a maximum width */
+    @apply bg-inprogress dark:bg-inprogress-dark;
-    overflow: hidden;
-    /* hide overflow */
-    text-overflow: ellipsis;
-    /* show ellipsis for overflowed text */
-    white-space: nowrap;
-    /* prevent wrapping */
 }
 
-.table-fixed {
+.bg-released {
-    table-layout: fixed;
+    @apply bg-released dark:bg-released-dark;
 }
 
-/* .pure-table tr.released {  
+.bg-editor-accepted {
-    background-color: rgb(52 211 153);
+    @apply bg-editor-accepted dark:bg-editor-accepted-dark;
-    color: gray;
+}
+
+.bg-approved {
+    @apply bg-approved dark:bg-approved-dark;
+}
+
+.bg-reviewed {
+    @apply bg-reviewed dark:bg-reviewed-dark;
+}
+
+.bg-rejected-editor {
+    @apply bg-rejected-editor dark:bg-rejected-editor-dark;
 } */
-
-/* .pure-table tr.inprogress {
-    padding: 0.8em;   
-    background-color: rgb(94 234 212);
-    color: gray;
-} */
-
-/* .pure-table tr.editor_accepted {   
-    background-color: rgb(125 211 252);
-    color: gray;
-} */
-
-/* .pure-table tr.rejected_reviewer {
-    padding: 0.8em;
-    background-color: orange;
-    color: gray;
-} */
-
-/* .pure-table tr.rejected_editor {  
-    background-color: orange;
-    color: gray;
-} */
-
-/* .pure-table tr.reviewed {   
-    background-color: yellow;
-    color: gray;
-} */
-
-/* .pure-table tr.approved {  
-    background-color: rgb(86, 86, 241);
-    color: whitesmoke; 
-
-}*/
 </style>

resources/js/apps/settings/basic_settings/BackgroundJob.vue

@@ -1,21 +1,41 @@
 <template>
-    <NcSettingsSection :name="t('settings', 'Background jobs')" :description="t(
+    <NcSettingsSection
-        'settings',
+        :name="t('settings', 'Background jobs')"
-        `For the server to work properly, it\'s important to configure background jobs correctly. Cron is the recommended setting. Please see the documentation for more information.`,
+        :description="
-    )" :doc-url="backgroundJobsDocUrl">
+            t(
-
+                'settings',
-        <template v-if="lastCron !== 0">
+                `For the server to work properly, it's important to configure background jobs correctly. Cron is the recommended setting. Please see the documentation for more information.`,
-            <NcNoteCard v-if="oldExecution" type="danger">
+            )
-                {{ t('settings', `Last job execution ran {time}. Something seems wrong.`, {
+        "
-                    time: relativeTime,
+        :doc-url="backgroundJobsDocUrl"
-                    timestamp: lastCron
+    >
-                }) }}
+        <template v-if="lastCronTimestamp">
+            <NcNoteCard v-if="isExecutionTooOld" type="danger">
+                {{
+                    t(
+                        'settings',
+                        `Last job execution ran {time}. Something seems wrong.
+                Timestamp of last cron: {timestamp} `,
+                        {
+                            time: relativeTime,
+                            timestamp: lastCronTimestamp,
+                        },
+                    )
+                }}
             </NcNoteCard>
 
-            <!-- <NcNoteCard v-else-if="longExecutionCron" type="warning">
+            <NcNoteCard v-else-if="isLongExecutionCron" type="warning">
-                {{ t('settings', `Some jobs have not been executed since {maxAgeRelativeTime}. Please consider increasing the execution frequency.`, {maxAgeRelativeTime}) }}
+                {{
-            </NcNoteCard> -->
+                    t(
-
+                        'settings',
+                        `Some jobs have not been executed since {maxAgeRelativeTime}. Please consider increasing the execution
+                frequency.`,
+                        {
+                            maxAgeRelativeTime,
+                        },
+                    )
+                }}
+            </NcNoteCard>
 
             <NcNoteCard v-else type="success">
                 {{ t('settings', 'Last job ran {relativeTime}.', { relativeTime }) }}
@@ -23,147 +43,180 @@
         </template>
 
         <NcNoteCard v-else type="danger">
-            'Background job did not run yet!'
+            {{ t('settings', 'Background job did not run yet!') }}
         </NcNoteCard>
 
+          <!-- Missing Cross References Warning -->
+        <NcNoteCard v-if="missingCrossReferencesCount >= 1" type="warning">
+            {{
+                t('settings', 'Found {count} missing dataset cross-reference(s). You can fix this by running: node ace detect:missing-cross-references --fix', {
+                    count: missingCrossReferencesCount,
+                })
+            }}
+        </NcNoteCard>
 
+        <!-- Background Jobs Status Display -->
+        <div class="background-jobs-mode">
+            <h3>{{ t('settings', 'Background Jobs Mode') }}</h3>
+
+            <div class="current-mode">
+                <span class="mode-label">{{ t('settings', 'Current mode:') }}</span>
+                <span class="mode-value">{{ getCurrentModeLabel() }}</span>
+            </div>
+
+            <!-- <div class="mode-description" v-if="backgroundJobsMode === 'cron'" v-html="cronLabel"></div> -->
+        </div>
+
+        <!-- Refresh Button -->
+        <div class="actions">
+            <button type="button" class="primary" @click="refreshStatus" :disabled="isRefreshing">
+                {{ isRefreshing ? t('settings', 'Refreshing...') : t('settings', 'Refresh Status') }}
+            </button>
+        </div>
     </NcSettingsSection>
 </template>
 
-<script lang="ts">
+<script setup lang="ts">
-import { usePage } from '@inertiajs/vue3';
+import { ref, computed, onMounted, onUnmounted } from 'vue';
+import { usePage, router } from '@inertiajs/vue3';
 import { loadState } from '@/utils/initialState';
-import { showError } from '@/utils/toast';
+import { showError, showSuccess } from '@/utils/toast';
-// import { generateOcsUrl } from '@nextcloud/router';
-// import { confirmPassword } from '@nextcloud/password-confirmation';
-import axios from 'axios';
 import dayjs from '@/utils/dayjs';
 
 import NcNoteCard from '@/Components/NCNoteCard.vue';
 import NcSettingsSection from '@/Components/NcSettingsSection.vue';
 import { translate as t } from '@/utils/tethyscloud-l10n';
-// import { useLocaleStore } from '@/Stores/locale';
 
-// import '@nextcloud/password-confirmation/dist/style.css';
+// Props and reactive data
+const cronMaxAge =ref<number>(loadState('settings', 'cronMaxAge', 1758824778));
+const backgroundJobsMode = ref<string>(loadState('settings', 'backgroundJobsMode', 'cron'));
+const cliBasedCronPossible = ref<boolean>(loadState('settings', 'cliBasedCronPossible', true));
+const cliBasedCronUser = ref<string>(loadState('settings', 'cliBasedCronUser', 'www-data'));
+const backgroundJobsDocUrl = ref<string>(loadState('settings', 'backgroundJobsDocUrl', ''));
+const isRefreshing = ref<boolean>(false);
 
-// const lastCron: number = 1723807502; //loadState('settings', 'lastCron'); //1723788607
+// Use reactive page reference
-const cronMaxAge: number = 1724046901;//loadState('settings', 'cronMaxAge', 0); //''
+const page = usePage();
-const backgroundJobsMode: string = loadState('settings', 'backgroundJobsMode', 'cron'); //cron
-const cliBasedCronPossible = loadState('settings', 'cliBasedCronPossible', true); //true
-const cliBasedCronUser = loadState('settings', 'cliBasedCronUser', 'www-data'); //www-data
-const backgroundJobsDocUrl: string = loadState('settings', 'backgroundJobsDocUrl'); //https://docs.nextcloud.com/server/29/go.php?to=admin-background-jobs
 
-// await loadTranslations('settings');
+// Auto-refresh timer
+let refreshTimer: NodeJS.Timeout | null = null;
+const AUTO_REFRESH_INTERVAL = 30000; // 30 seconds
 
-export default {
+// Computed properties
-    name: 'BackgroundJob',
+const missingCrossReferencesCount = computed((): number => {
+    const count = page.props.missingCrossReferencesCount as string | number;
+    return typeof count === 'string' ? parseInt(count) || 0 : count || 0;
+});
 
-    components: {
+const lastCronTimestamp = computed((): number => {
-        NcSettingsSection,
+    const lastCron =  page.props.lastCron as string | number;
-        NcNoteCard,
+    return typeof lastCron === 'string' ? parseInt(lastCron) || 0 : lastCron || 0;
-    },
+});
 
-    data() {
+const relativeTime = computed((): string => {
-        return {
+    if (!lastCronTimestamp.value) return '';
-            // lastCron: 0,
+    // Reference currentTime.value to make this reactive to time changes
-            cronMaxAge: cronMaxAge,
+    let intermValue = page.props.lastCron as string | number;
-            backgroundJobsMode: backgroundJobsMode,
+    intermValue = typeof intermValue === 'string' ? parseInt(intermValue) || 0 : intermValue || 0;
-            cliBasedCronPossible: cliBasedCronPossible,
+    return dayjs.unix(intermValue).fromNow();
-            cliBasedCronUser: cliBasedCronUser,
+});
-            backgroundJobsDocUrl: backgroundJobsDocUrl,
-            // relativeTime: dayjs(this.lastCron * 1000).fromNow(),
-            // maxAgeRelativeTime: dayjs(cronMaxAge * 1000).fromNow(),
-            t: t,
-        };
-    },
-    computed: {
-        lastCron(): number {
-            return usePage().props.lastCron as number;
 
-        },
+const maxAgeRelativeTime = computed((): string => {
-        relativeTime() {
+    return dayjs.unix(cronMaxAge).fromNow();
-            return dayjs.unix(this.lastCron).fromNow(); // Calculate relative time for lastCron
+});
-        },
-        maxAgeRelativeTime() {
-            return dayjs.unix(this.cronMaxAge).fromNow(); // Calculate relative time for cronMaxAge
-        },
-        cronLabel() {
-            let desc = 'Use system cron service to call the cron.php file every 5 minutes.';
-            if (this.cliBasedCronPossible) {
-                desc +=
-                    '<br>' +
-                    'The cron.php needs to be executed by the system account "{user}".', { user: this.cliBasedCronUser };
-            } else {
-                desc +=
-                    '<br>' +
 
-                    'The PHP POSIX extension is required. See {linkstart}PHP documentation{linkend} for more details.',
+const cronLabel = computed((): string => {
-                {
+    let desc = t('settings', 'Use system cron service to call the cron.php file every 5 minutes.');
-                    linkstart:
-                        '<a target="_blank" rel="noreferrer nofollow" class="external" href="https://www.php.net/manual/en/book.posix.php">',
-                    linkend: '</a>',
-                }
-            }
-            return desc;
-        },
-        oldExecution() {
-            return (dayjs().unix() - this.lastCron) > 600; // older than 10 minutes
-        },
 
-        longExecutionCron() {
+    if (cliBasedCronPossible.value) {
-            //type of cron job and greater than 24h
+        desc +=
-            // let test = dayjs.unix(this.cronMaxAge).format('YYYY-MM-DD HH:mm:ss');
+            '<br>' +
-            return (dayjs().unix()  - this.cronMaxAge) > 24 * 3600 && this.backgroundJobsMode === 'cron';
+            t('settings', 'The cron.php needs to be executed by the system account "{user}".', {
-        },
+                user: cliBasedCronUser.value,
-    },
-    methods: {
-        async onBackgroundJobModeChanged(backgroundJobsMode: string) {
-            const url = generateOcsUrl('/apps/provisioning_api/api/v1/config/apps/{appId}/{key}', {
-                appId: 'core',
-                key: 'backgroundjobs_mode',
             });
-
+    } else {
-            // await confirmPassword();
+        desc +=
-
+            '<br>' +
-            try {
+            t('settings', 'The PHP POSIX extension is required. See {linkstart}PHP documentation{linkend} for more details.', {
-                const { data } = await axios.post(url, {
+                linkstart:
-                    value: backgroundJobsMode,
+                    '<a target="_blank" rel="noreferrer nofollow" class="external" href="https://www.php.net/manual/en/book.posix.php">',
-                });
+                linkend: '</a>',
-                this.handleResponse({
-                    status: data.ocs?.meta?.status,
-                });
-            } catch (e) {
-                this.handleResponse({
-                    errorMessage: t('settings', 'Unable to update background job mode'),
-                    error: e,
-                });
-            }
-        },
-        async handleResponse({ status, errorMessage, error }) {
-            if (status === 'ok') {
-                await this.deleteError();
-            } else {
-                showError(errorMessage);
-                console.error(errorMessage, error);
-            }
-        },
-        async deleteError() {
-            // clear cron errors on background job mode change
-            const url = generateOcsUrl('/apps/provisioning_api/api/v1/config/apps/{appId}/{key}', {
-                appId: 'core',
-                key: 'cronErrors',
             });
+    }
 
-            // await confirmPassword();
+    return desc;
+});
 
-            try {
+const isExecutionTooOld = computed((): boolean => {
-                await axios.delete(url);
+    if (!lastCronTimestamp.value) return false;
-            } catch (error) {
+    return dayjs().unix() - lastCronTimestamp.value > 600; // older than 10 minutes
-                console.error(error);
+});
-            }
+
-        },
+const isLongExecutionCron = computed((): boolean => {
-    },
+    return dayjs().unix() - cronMaxAge > 24 * 3600 && backgroundJobsMode.value === 'cron';
+});
+
+// Methods
+const getCurrentModeLabel = (): string => {
+    switch (backgroundJobsMode.value) {
+        case 'cron':
+            return t('settings', 'Cron (Recommended)');
+        case 'webcron':
+            return t('settings', 'Webcron');
+        case 'ajax':
+            return t('settings', 'AJAX');
+        default:
+            return t('settings', 'Unknown');
+    }
 };
+
+const refreshStatus = async (): Promise<void> => {
+    isRefreshing.value = true;
+
+    try {
+        // Use Inertia to refresh the current page data
+        router.reload({
+            only: ['lastCron', 'cronMaxAge', 'missingCrossReferencesCount'], // Also reload missing cross references count
+            onSuccess: () => {
+                showSuccess(t('settings', 'Background job status refreshed'));
+            },
+            onError: () => {
+                showError(t('settings', 'Failed to refresh status'));
+            },
+            onFinish: () => {
+                isRefreshing.value = false;
+            },
+        });
+    } catch (error) {
+        console.error('Failed to refresh status:', error);
+        showError(t('settings', 'Failed to refresh status'));
+        isRefreshing.value = false;
+    }
+};
+
+const startAutoRefresh = (): void => {
+    refreshTimer = setInterval(() => {
+        if (!isRefreshing.value) {
+            router.reload({ only: ['lastCron', 'cronMaxAge', 'missingCrossReferencesCount'] });
+        }
+    }, AUTO_REFRESH_INTERVAL);
+};
+
+const stopAutoRefresh = (): void => {
+    if (refreshTimer) {
+        clearInterval(refreshTimer);
+        refreshTimer = null;
+    }
+};
+
+// Lifecycle hooks
+onMounted(() => {
+    startAutoRefresh();
+});
+
+onUnmounted(() => {
+    stopAutoRefresh();
+});
 </script>
 
 <style lang="css" scoped>
@@ -185,7 +238,76 @@ export default {
     width: initial;
 }
 
-.ajaxSwitch {
+.background-jobs-mode {
     margin-top: 1rem;
 }
+
+.background-jobs-mode h3 {
+    margin-bottom: 0.5rem;
+    font-weight: 600;
+}
+
+.current-mode {
+    display: flex;
+    align-items: center;
+    gap: 0.5rem;
+    margin-bottom: 1rem;
+}
+
+.mode-label {
+    font-weight: 500;
+    color: var(--color-text-light);
+}
+
+.mode-value {
+    font-weight: 600;
+    color: var(--color-main-text);
+    padding: 0.25rem 0.5rem;
+    background-color: var(--color-background-hover);
+    border-radius: var(--border-radius);
+}
+
+.mode-description {
+    color: var(--color-text-maxcontrast);
+    font-size: 0.9rem;
+    line-height: 1.4;
+    margin-top: 0.5rem;
+}
+
+.actions {
+    margin-top: 1rem;
+    display: flex;
+    gap: 0.5rem;
+}
+
+.actions button {
+    padding: 0.5rem 1rem;
+    border: none;
+    border-radius: var(--border-radius);
+    cursor: pointer;
+    font-weight: 500;
+    transition: all 0.2s ease;
+}
+
+.actions button.primary {
+    background-color: var(--color-primary-element);
+    color: var(--color-primary-element-text);
+}
+
+.actions button.primary:hover:not(:disabled) {
+    background-color: var(--color-primary-element-hover);
+}
+
+.actions button.primary:disabled {
+    opacity: 0.6;
+    cursor: not-allowed;
+}
+
+@media (max-width: 768px) {
+    .current-mode {
+        flex-direction: column;
+        align-items: flex-start;
+        gap: 0.25rem;
+    }
+}
 </style>

resources/js/colors.ts

@@ -99,5 +99,6 @@ export const getButtonColor = (color: 'white' | 'contrast' | 'light' | 'success'
         base.push(isOutlined ? colors.outlineHover[color] : colors.bgHover[color]);
     }
 
-    return base;
+    // return base;
+    return base.join(' '); // Join array into single string
 };

resources/js/menu.ts

@@ -12,7 +12,7 @@ import {
     mdiShieldCrownOutline,
     mdiLicense,
     mdiFileDocument,
-    mdiLibraryShelves 
+    mdiFolderMultiple, 
 } from '@mdi/js';
 
 export default [
@@ -92,6 +92,12 @@ export default [
                 label: 'Licenses',
                 roles: ['administrator'],
             },
+             {
+                route: 'settings.project.index',
+                icon: mdiFolderMultiple,
+                label: 'Projects',
+                roles: ['administrator'],
+            },
         ],
     },
 

resources/js/utils/dayjs.ts

@@ -4,13 +4,13 @@ import relativeTime from 'dayjs/plugin/relativeTime';
 import 'dayjs/locale/de';
 import 'dayjs/locale/en';
 
-const extendedDayjs = dayjs.extend(relativeTime);
+dayjs.extend(relativeTime);
 
 export const setDayjsLocale = (locale: string) => {
-  extendedDayjs.locale(locale);
+  dayjs.locale(locale);
 };
 
 // // Set a default locale initially
 // setDayjsLocale('en');
 
-export default extendedDayjs;
+export default dayjs;

resources/js/utils/toast.ts

@@ -160,6 +160,16 @@ export function showError(text: string, options?: ToastOptions): Toast {
 	return showMessage(text, { ...options, type: ToastType.ERROR })
 }
 
+/**
+ * Show a toast message with success styling
+ *
+ * @param text Message to be shown in the toast, any HTML is removed by default
+ * @param options
+ */
+export function showSuccess(text: string, options?: ToastOptions): Toast {
+    return showMessage(text, { ...options, type: ToastType.SUCCESS });
+}
+
 export default {
     updatableNotification: null,
 

start/routes.ts

@@ -34,6 +34,7 @@ import DatasetController from '#app/Controllers/Http/Submitter/DatasetController
 import PersonController from '#app/Controllers/Http/Submitter/PersonController';
 import EditorDatasetController from '#app/Controllers/Http/Editor/DatasetController';
 import ReviewerDatasetController from '#app/Controllers/Http/Reviewer/DatasetController';
+import ProjectsController from '#app/controllers/projects_controller';
 import './routes/api.js';
 import { middleware } from './kernel.js';
 import db from '@adonisjs/lucid/services/db'; // Import the DB service
@@ -127,15 +128,33 @@ router
     .group(() => {
         router
             .get('/settings', async ({ inertia }: HttpContext) => {
-                const updatedConfigValue = await db
+                try {
-                    .from('appconfigs')
+                    const [lastJobConfig, missingCrossReferencesConfig] = await Promise.all([
-                    .select('configvalue')
+                        db.from('appconfigs').select('configvalue').where('appid', 'backgroundjob').where('configkey', 'lastjob').first(),
-                    .where('appid', 'backgroundjob')
+                        db
-                    .where('configkey', 'lastjob')
+                            .from('appconfigs')
-                    .first();
+                            .select('configvalue')
-                return inertia.render('Admin/Settings', {
+                            .where('appid', 'commands')
-                    lastCron: updatedConfigValue?.configvalue || '',
+                            .where('configkey', 'missing_cross_references_count')
-                });
+                            .first(),
+                    ]);
+
+                    return inertia.render('Admin/Settings', {
+                        lastCron: lastJobConfig?.configvalue || 0,
+                        missingCrossReferencesCount: parseInt(missingCrossReferencesConfig?.configvalue || '0'),
+                        // Add timestamp for cache busting
+                        lastUpdated: Date.now(),
+                    });
+                } catch (error) {
+                    console.error('Failed to load background job settings:', error);
+                    return inertia.render('Admin/Settings', {
+                        lastCron: 0,
+                        cronMaxAge: 0,
+                        backgroundJobsMode: 'cron',
+                        missingCrossReferencesCount: 0,
+                        error: 'Failed to load background job settings',
+                    });
+                }
             })
             .as('overview');
 
@@ -216,6 +235,19 @@ router
             .where('id', router.matchers.number())
             .use(middleware.can(['settings']));
 
+        // Project routes
+        // List all projects
+        router.get('/projects',  [ProjectsController, 'index']).as('project.index');
+        // Show create form
+        router.get('/projects/create', [ProjectsController, 'create']).as('project.create').use(middleware.can(['settings']));;
+        // Store new project
+        router.post('/projects', [ProjectsController, 'store']).as('project.store').use(middleware.can(['settings']));;
+        // Show edit form
+        router.get('/projects/:id/edit',[ProjectsController, 'edit']).as('project.edit').use(middleware.can(['settings']));;
+        // Update project
+        router.put('/projects/:id',[ProjectsController, 'update']).as('project.update').use(middleware.can(['settings']));;
+      
+
         // Mimetype routes
         router.get('/mimetype', [MimetypeController, 'index']).as('mimetype.index');
         router

start/routes/api.ts

@@ -8,14 +8,24 @@ import AvatarController from '#controllers/Http/Api/AvatarController';
 import UserController from '#controllers/Http/Api/UserController';
 import CollectionsController from '#controllers/Http/Api/collections_controller';
 import { middleware } from '../kernel.js';
-// API
+
+// Clean DOI URL routes (no /api prefix)
+
+// API routes with /api prefix
 router
     .group(() => {
-        router.get('clients', [UserController, 'getSubmitters']).as('client.index').use(middleware.auth());;
+        router.get('clients', [UserController, 'getSubmitters']).as('client.index').use(middleware.auth());
-        router.get('authors', [AuthorsController, 'index']).as('author.index').use(middleware.auth());;
+        router.get('authors', [AuthorsController, 'index']).as('author.index').use(middleware.auth());
         router.get('datasets', [DatasetController, 'index']).as('dataset.index');
         router.get('persons', [AuthorsController, 'persons']).as('author.persons');
 
+        // This should come BEFORE any other routes that might conflict
+        router
+            .get('/dataset/:prefix/:value', [DatasetController, 'findByIdentifier'])
+            .where('prefix', /^10\.\d+$/) // Match DOI prefix pattern (10.xxxx)
+            .where('value', /^[a-zA-Z0-9._-]+\.[0-9]+(?:\.[0-9]+)*$/) // Match DOI suffix pattern
+            .as('dataset.findByIdentifier');
+
         router.get('/dataset', [DatasetController, 'findAll']).as('dataset.findAll');
         router.get('/dataset/:publish_id', [DatasetController, 'findOne']).as('dataset.findOne');
         router.get('/sitelinks/:year', [HomeController, 'findDocumentsPerYear']);
@@ -35,7 +45,7 @@ router
             .as('apps.twofactor_backupcodes.create')
             .use(middleware.auth());
 
-        router.get('collections/:id', [CollectionsController, 'show']).as('collection.show')
+        router.get('collections/:id', [CollectionsController, 'show']).as('collection.show');
     })
     // .namespace('App/Controllers/Http/Api')
     .prefix('api');

start/rules/dependent_array_min_length.ts

@@ -2,7 +2,7 @@
 |--------------------------------------------------------------------------
 | Preloaded File - node ace make:preload rules/dependentArrayMinLength
 |--------------------------------------------------------------------------
-|*/
+*/
 
 import { FieldContext } from '@vinejs/vine/types';
 import vine, { VineArray } from '@vinejs/vine';
@@ -17,39 +17,75 @@ type Options = {
 };
 
 async function dependentArrayMinLength(value: unknown, options: Options, field: FieldContext) {
-    const fileInputs = field.data[options.dependentArray]; // Access the dependent array
+    const dependentArrayValue = field.data[options.dependentArray];
-    const isArrayValue = Array.isArray(value);
-    const isArrayFileInputs = Array.isArray(fileInputs);
     
-    if (isArrayValue && isArrayFileInputs) {
+    // Both values can be null/undefined or arrays, but not other types
-        if (value.length >= options.min) {
+    const isMainValueValid = value === null || value === undefined || Array.isArray(value);
-            return true; // Valid if the main array length meets the minimum
+    const isDependentValueValid = dependentArrayValue === null || dependentArrayValue === undefined || Array.isArray(dependentArrayValue);
-        } else if (value.length === 0 && fileInputs.length >= options.min) {
+    
-            return true; // Valid if the main array is empty and the dependent array meets the minimum
+    if (!isMainValueValid || !isDependentValueValid) {
-        } else {
-            field.report(
-                `At least {{ min }} item for {{field}} field must be defined`,
-                'array.dependentArrayMinLength',
-                field,
-                options,
-            );
-        }
-    } else {
-        // Report if either value or dependentArray is not an array
         field.report(
-            `Both the {{field}} field and dependent array {{dependentArray}} must be arrays.`,
+            `Invalid file data format. Please contact support if this error persists.`,
+            'array.dependentArrayMinLength',
+            field,
+            options,
+        );
+        return false;
+    }
+
+    // Convert null/undefined to empty arrays for length checking
+    const mainArray = Array.isArray(value) ? value : [];
+    const dependentArray = Array.isArray(dependentArrayValue) ? dependentArrayValue : [];
+    
+    // Calculate total count across both arrays
+    const totalCount = mainArray.length + dependentArray.length;
+    
+    // Check if minimum requirement is met
+    if (totalCount >= options.min) {
+        return true;
+    }
+    
+    // Special case: if dependent array has items, main array can be empty/null
+    if (dependentArray.length >= options.min && mainArray.length === 0) {
+        return true;
+    }
+    
+    // Determine appropriate error message based on context
+    const hasExistingFiles = dependentArray.length > 0;
+    const hasNewFiles = mainArray.length > 0;
+    
+    if (!hasExistingFiles && !hasNewFiles) {
+        // No files at all
+        field.report(
+            `Your dataset must include at least {{ min }} file. Please upload a new file to continue.`,
+            'array.dependentArrayMinLength',
+            field,
+            options,
+        );
+    } else if (hasExistingFiles && !hasNewFiles && dependentArray.length < options.min) {
+        // Has existing files but marked for deletion, no new files
+        field.report(
+            `You have marked all existing files for deletion. Please upload at least {{ min }} new file or keep some existing files.`,
+            'array.dependentArrayMinLength',
+            field,
+            options,
+        );
+    } else {
+        // Generic fallback message
+        field.report(
+            `Your dataset must have at least {{ min }} file. You can either upload new files or keep existing ones.`,
             'array.dependentArrayMinLength',
             field,
             options,
         );
     }
     
-    return false; // Invalid if none of the conditions are met
+    return false;
 }
 
 export const dependentArrayMinLengthRule = vine.createRule(dependentArrayMinLength);
 
-// Extend the VineArray interface with the same type parameters
+// Extend the VineArray interface
 declare module '@vinejs/vine' {
     interface VineArray<Schema extends SchemaTypes> {
         dependentArrayMinLength(options: Options): this;

start/rules/file_scan.ts

@@ -43,10 +43,14 @@ async function scanFileForViruses(filePath: string | undefined, options: Options
         scanRecursively: true, // If true, deep scan folders recursively
         clamdscan: {
             active: true, // If true, this module will consider using the clamdscan binary
-            host: options.host,
+            host: options.host, // IP of host to connect to TCP interface,
-            port: options.port,
+            port: options.port, // Port of host to use when connecting to TCP interface
+            // socket: '/var/run/clamav/clamd.socket', // Socket file for connecting via socket        
+            // localFallback: false, // Use local clamscan binary if socket/tcp fails
+            // port: options.port,
             multiscan: true, // Scan using all available cores! Yay!
         },
+        preference: 'clamdscan', // If clamdscan is found and active, it will be used by default over clamscan
     };
 
     const clamscan = await new ClamScan().init(opts);

start/rules/orcid.ts

@@ -0,0 +1,175 @@
+/*
+|--------------------------------------------------------------------------
+| Preloaded File - node ace make:preload rules/orcid
+| Do you want to register the preload file in .adonisrc.ts file? (y/N) · true
+| DONE:    create start/rules/orcid.ts
+| DONE:    update adonisrc.ts file
+|--------------------------------------------------------------------------
+*/
+
+import vine, { VineString } from '@vinejs/vine';
+import { FieldContext } from '@vinejs/vine/types';
+
+/**
+ * ORCID Validator Implementation
+ *
+ * Validates ORCID identifiers using both format validation and checksum verification.
+ * ORCID (Open Researcher and Contributor ID) is a persistent digital identifier
+ * that distinguishes researchers and supports automated linkages between them
+ * and their professional activities.
+ *
+ * Format: 0000-0000-0000-0000 (where the last digit can be X for checksum 10)
+ * Algorithm: MOD-11-2 checksum validation as per ISO/IEC 7064:2003
+ *
+ * @param value - The ORCID value to validate
+ * @param _options - Unused options parameter (required by VineJS signature)
+ * @param field - VineJS field context for error reporting
+ */
+async function orcidValidator(value: unknown, _options: undefined, field: FieldContext) {
+    /**
+     * Type guard: We only validate string values
+     * The "string" rule should handle type validation before this rule runs
+     */
+    if (typeof value !== 'string') {
+        return;
+    }
+
+    /**
+     * Handle optional fields: Skip validation for empty strings
+     * This allows the field to be truly optional when used with .optional()
+     */
+    if (value.trim() === '') {
+        return;
+    }
+
+    /**
+     * Normalize the ORCID value:
+     * - Remove any whitespace characters
+     * - Convert to uppercase (for potential X check digit)
+     */
+    const cleanOrcid = value.replace(/\s/g, '').toUpperCase();
+
+    /**
+     * Format Validation
+     *
+     * ORCID format regex breakdown:
+     * ^(\d{4}-){3}  - Three groups of exactly 4 digits followed by hyphen
+     * \d{3}         - Three more digits
+     * [\dX]$        - Final character: either digit or 'X' (for checksum 10)
+     *
+     * Valid examples: 0000-0002-1825-0097, 0000-0002-1825-009X
+     */
+    const orcidRegex = /^(\d{4}-){3}\d{3}[\dX]$/;
+
+    if (!orcidRegex.test(cleanOrcid)) {
+        field.report('ORCID must be in format: 0000-0000-0000-0000 or 0000-0000-0000-000X', 'orcid', field);
+        return;
+    }
+
+    /**
+     * Checksum Validation - MOD-11-2 Algorithm
+     *
+     * This implements the official ORCID checksum algorithm based on ISO/IEC 7064:2003
+     * to verify mathematical validity and detect typos or invalid identifiers.
+     */
+
+    // Step 1: Extract digits and separate check digit
+    const digits = cleanOrcid.replace(/-/g, ''); // Remove hyphens: "0000000218250097"
+    const baseDigits = digits.slice(0, -1); // First 15 digits: "000000021825009"
+    const checkDigit = digits.slice(-1); // Last character: "7"
+
+    /**
+     * Step 2: Calculate checksum using MOD-11-2 algorithm
+     *
+     * For each digit from left to right:
+     * 1. Add the digit to running total
+     * 2. Multiply result by 2
+     *
+     * Example for "000000021825009":
+     * - Start with total = 0
+     * - Process each digit: total = (total + digit) * 2
+     * - Continue until all 15 digits are processed
+     */
+    let total = 0;
+    for (const digit of baseDigits) {
+        total = (total + parseInt(digit)) * 2;
+    }
+
+    /**
+     * Step 3: Calculate expected check digit
+     *
+     * Formula: (12 - (total % 11)) % 11
+     * - Get remainder when total is divided by 11
+     * - Subtract from 12 and take modulo 11 again
+     * - If result is 10, use 'X' (since we need single character)
+     *
+     * Example: total = 1314
+     * - remainder = 1314 % 11 = 5
+     * - result = (12 - 5) % 11 = 7
+     * - expectedCheckDigit = "7"
+     */
+    const remainder = total % 11;
+    const result = (12 - remainder) % 11;
+    const expectedCheckDigit = result === 10 ? 'X' : result.toString();
+
+    /**
+     * Step 4: Verify checksum matches
+     *
+     * Compare the actual check digit with the calculated expected value.
+     * If they don't match, the ORCID is invalid (likely contains typos or is fabricated).
+     */
+    if (checkDigit !== expectedCheckDigit) {
+        field.report('Invalid ORCID checksum', 'orcid', field);
+        return;
+    }
+
+    // If we reach this point, the ORCID is valid (both format and checksum)
+}
+
+/**
+ * Create the VineJS validation rule
+ *
+ * This creates a reusable rule that can be chained with other VineJS validators
+ */
+const orcidRule = vine.createRule(orcidValidator);
+
+/**
+ * TypeScript module declaration
+ *
+ * Extends the VineString interface to include our custom orcid() method.
+ * This enables TypeScript autocompletion and type checking when using the rule.
+ */
+declare module '@vinejs/vine' {
+    interface VineString {
+        /**
+         * Validates that a string is a valid ORCID identifier
+         *
+         * Checks both format (0000-0000-0000-0000) and mathematical validity
+         * using the MOD-11-2 checksum algorithm.
+         *
+         * @example
+         * ```typescript
+         * // Usage in validation schema
+         * identifier_orcid: vine.string().trim().maxLength(255).orcid().optional()
+         * ```
+         *
+         * @returns {this} The VineString instance for method chaining
+         */
+        orcid(): this;
+    }
+}
+
+/**
+ * Register the macro with VineJS
+ *
+ * This adds the .orcid() method to all VineString instances,
+ * allowing it to be used in validation schemas.
+ *
+ * Usage example:
+ * ```typescript
+ * vine.string().orcid().optional()
+ * ```
+ */
+VineString.macro('orcid', function (this: VineString) {
+    return this.use(orcidRule());
+});

tailwind.config.js

@@ -13,8 +13,49 @@ module.exports = {
         },
         extend: {
             backgroundImage: {
-                'radio-checked': "url(\"data:image/svg+xml,%3Csvg xmlns='http://www.w3.org/2000/svg' viewBox='0 0 24 24'%3E%3Cpath fill='%23fff' d='M12,2A10,10 0 0,0 2,12A10,10 0 0,0 12,22A10,10 0 0,0 22,12A10,10 0 0,0 12,2Z' /%3E%3C/svg%3E\")",
+                'radio-checked':
-                'checkbox-checked': "url(\"data:image/svg+xml,%3Csvg xmlns='http://www.w3.org/2000/svg' viewBox='0 0 1 1'%3E%3Cpath style='fill:%23fff' d='M 0.04038059,0.6267767 0.14644661,0.52071068 0.42928932,0.80355339 0.3232233,0.90961941 z M 0.21715729,0.80355339 0.85355339,0.16715729 0.95961941,0.2732233 0.3232233,0.90961941 z'%3E%3C/path%3E%3C/svg%3E\")",
+                    "url(\"data:image/svg+xml,%3Csvg xmlns='http://www.w3.org/2000/svg' viewBox='0 0 24 24'%3E%3Cpath fill='%23fff' d='M12,2A10,10 0 0,0 2,12A10,10 0 0,0 12,22A10,10 0 0,0 22,12A10,10 0 0,0 12,2Z' /%3E%3C/svg%3E\")",
+                'checkbox-checked':
+                    "url(\"data:image/svg+xml,%3Csvg xmlns='http://www.w3.org/2000/svg' viewBox='0 0 1 1'%3E%3Cpath style='fill:%23fff' d='M 0.04038059,0.6267767 0.14644661,0.52071068 0.42928932,0.80355339 0.3232233,0.90961941 z M 0.21715729,0.80355339 0.85355339,0.16715729 0.95961941,0.2732233 0.3232233,0.90961941 z'%3E%3C/path%3E%3C/svg%3E\")",
+            },
+            backgroundColor: {
+                // Draft / In Progress - Light blue-gray
+                'draft': 'rgb(224 242 254)', // sky-100
+                'draft-dark': 'rgb(12 74 110 / 0.3)', // sky-900/30
+                'inprogress': 'rgb(224 242 254)', // sky-100
+                'inprogress-dark': 'rgb(12 74 110 / 0.3)', // sky-900/30
+
+                // Released / Submitted - Bright blue
+                'released': 'rgb(191 219 254)', // blue-200
+                'released-dark': 'rgb(30 58 138 / 0.3)', // blue-900/30
+
+                // Editor Accepted - Blue-green (teal)
+                'editor-accepted': 'rgb(204 251 241)', // teal-100
+                'editor-accepted-dark': 'rgb(19 78 74 / 0.3)', // teal-900/30
+
+                // Rejected by Reviewer - Yellow-orange (amber)
+                'rejected-reviewer': 'rgb(254 243 199)', // amber-100
+                'rejected-reviewer-dark': 'rgb(120 53 15 / 0.3)', // amber-900/30
+
+                // Rejected by Editor - Rose/Red (back to submitter)
+                'rejected-editor': 'rgb(254 205 211)', // rose-200
+                'rejected-editor-dark': 'rgb(136 19 55 / 0.3)', // rose-900/30
+
+                // Approved / Ready for Review - Cyan (blue-green)
+                'approved': 'rgb(207 250 254)', // cyan-100
+                'approved-dark': 'rgb(22 78 99 / 0.3)', // cyan-900/30
+
+                // Reviewer Accepted / In Review - Lime yellow-green
+                'reviewer-accepted': 'rgb(236 252 203)', // lime-100
+                'reviewer-accepted-dark': 'rgb(54 83 20 / 0.3)', // lime-900/30
+
+                // Reviewed - Soft yellow
+                'reviewed': 'rgb(254 240 138)', // yellow-200
+                'reviewed-dark': 'rgb(113 63 18 / 0.3)', // yellow-900/30
+
+                // Published - Fresh green
+                'published': 'rgb(187 247 208)', // green-200
+                'published-dark': 'rgb(20 83 45 / 0.3)', // green-900/30
             },
             colors: {
                 'primary': '#22C55E',
@@ -30,7 +71,7 @@ module.exports = {
                 'lime': {
                     DEFAULT: '#BFCE40',
                     dark: 'rgba(5,46,55,0.7)',
-                    50:  '#FBFCF7',
+                    50: '#FBFCF7',
                     100: '#F8FBE1',
                     200: '#EEF69E',
                     300: '#DCEC53',
@@ -40,7 +81,7 @@ module.exports = {
                     700: '#357C06',
                     800: '#295B09',
                     900: '#20450A',
-                  },
+                },
             },
             fontFamily: {
                 sans: ['Inter', ...defaultTheme.fontFamily.sans],
@@ -106,7 +147,7 @@ module.exports = {
                 { values: theme('asideScrollbars') },
             );
         }),
-        plugin(function({ addUtilities }) {
+        plugin(function ({ addUtilities }) {
             const newUtilities = {
                 '.drag-none': {
                     '-webkit-user-drag': 'none',
@@ -115,8 +156,8 @@ module.exports = {
                     '-o-user-drag': 'none',
                     'user-drag': 'none',
                 },
-            }
+            };
-            addUtilities(newUtilities)
+            addUtilities(newUtilities);
         }),
         // As of Tailwind CSS v3.3, the `@tailwindcss/line-clamp` plugin is now included by default
         // require('@tailwindcss/line-clamp'),